Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g47761_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 3.1e-90 335.1 171 100.0
MBI11_g41124_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 1.0e-85 320.1 170 95.9
MBI11_g41127_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 2.6e-76 288.9 170 88.8
MBI11_g31491_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 7.5e-76 287.3 184 82.6
MBI11_g40802_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 7.5e-76 287.3 170 87.6
Nn6g34244 Nelumbo nucifera HOM05D004958 ORTHO05D005983 2.6e-60 235.7 170 70.0
GSVIVG01019856001 Vitis vinifera HOM05D004958 ORTHO05D005983 4.4e-60 235.0 171 70.8
Duzib068G0251 Durio zibethinus HOM05D004958 ORTHO05D005983 4.9e-59 231.5 170 70.0
DCAR_008420 Daucus carota HOM05D004958 ORTHO05D005983 1.1e-58 230.3 170 68.8
Lalb_Chr07g0189581 Lupinus albus HOM05D004958 ORTHO05D005983 9.2e-58 227.3 169 68.0
Nitab4.5_0001586g0220 Nicotiana tabacum HOM05D004958 ORTHO05D005983 9.2e-58 227.3 170 67.1
Nitab4.5_0002553g0040 Nicotiana tabacum HOM05D004958 ORTHO05D005983 2.7e-57 225.7 170 66.5
Manes.01G066700 Manihot esculenta HOM05D004958 ORTHO05D005983 6.0e-57 224.6 170 67.1
Glyma.07G082900 Glycine max HOM05D004958 ORTHO05D005983 7.8e-57 224.2 171 68.4
MBI04_g02075_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 1.0e-56 223.8 171 73.7
Thecc.03G271700 Theobroma cacao HOM05D004958 ORTHO05D005983 1.3e-56 223.4 170 69.4
HPP92_003759 Vanilla planifolia HOM05D004958 ORTHO05D005983 1.3e-56 223.4 165 66.7
Prupe.6G131000 Prunus persica HOM05D004958 ORTHO05D005983 1.7e-56 223.0 170 68.2
Eucgr.D01919 Eucalyptus grandis HOM05D004958 ORTHO05D005983 2.3e-56 222.6 165 68.5
Lalb_Chr12g0208371 Lupinus albus HOM05D004958 ORTHO05D005983 2.3e-56 222.6 169 66.3
Lalb_Chr12g0208451 Lupinus albus HOM05D004958 ORTHO05D005983 2.3e-56 222.6 169 66.3
Gohir.D11G021000 Gossypium hirsutum HOM05D004958 ORTHO05D005983 3.0e-56 222.2 169 68.0
Nitab4.5_0003994g0020 Nicotiana tabacum HOM05D004958 ORTHO05D005983 5.1e-56 221.5 170 65.3
Hund11528 Selenicereus undatus HOM05D004958 ORTHO05D005983 5.1e-56 221.5 171 67.3
Gorai.007G022300 Gossypium raimondii HOM05D004958 ORTHO05D005983 6.6e-56 221.1 169 67.5
Lsat_1_v5_gn_6_87641 Lactuca sativa HOM05D004958 ORTHO05D005983 8.6e-56 220.7 170 65.9
Gohir.A11G021300 Gossypium hirsutum HOM05D004958 ORTHO05D005983 1.1e-55 220.3 169 67.5
Phvul.010G049100 Phaseolus vulgaris HOM05D004958 ORTHO05D005983 1.1e-55 220.3 171 65.5
Nitab4.5_0003113g0020 Nicotiana tabacum HOM05D004958 ORTHO05D005983 1.9e-55 219.5 170 64.1
Phvul.009G080900 Phaseolus vulgaris HOM05D004958 ORTHO05D005983 3.3e-55 218.8 171 64.9
Potri.001G110000 Populus trichocarpa HOM05D004958 ORTHO05D005983 4.3e-55 218.4 169 65.7
Ca_05359_v3 Cicer arietinum L. HOM05D004958 ORTHO05D005983 9.5e-55 217.2 169 63.9
arahy.Tifrunner.gnm1.ann1.BCQ50G Arachis hypogaea HOM05D004958 ORTHO05D005983 1.2e-54 216.9 170 66.5
CSS0008368 Camellia sinensis var. sinensis HOM05D004958 ORTHO05D005983 1.2e-54 216.9 170 65.3
Hma1.2p1_0514F.1_g170070 Hydrangea macrophylla HOM05D004958 ORTHO05D005983 1.2e-54 216.9 169 65.7
VMungo0331G1538 Vigna mungo HOM05D004958 ORTHO05D005983 1.2e-54 216.9 171 65.5
Ciclev10021851m.g Citrus clementina HOM05D004958 ORTHO05D005983 1.6e-54 216.5 170 63.5
FvH4_3g25070 Fragaria vesca HOM05D000097 ORTHO05D005983 2.1e-54 216.1 171 63.7
PSO782G2900 Papaver somniferum HOM05D004958 ORTHO05D005983 2.1e-54 216.1 165 68.5
RcHm_v2.0_Chr5g0045251 Rosa chinensis HOM05D004958 ORTHO05D005983 2.8e-54 215.7 171 63.7
PSO478G4928 Papaver somniferum HOM05D004958 ORTHO05D005983 4.7e-54 214.9 165 68.5
Ca_24641_v3 Cicer arietinum L. HOM05D004958 ORTHO05D005983 6.2e-54 214.5 169 63.3
Actinidia27408 Actinidia chinensis HOM05D004958 ORTHO05D005983 1.1e-53 213.8 170 65.9
FvH4_7g07500 Fragaria vesca HOM05D004958 ORTHO05D005983 1.8e-53 213.0 171 62.6
Glyma.03G021100 Glycine max HOM05D004958 ORTHO05D005983 2.3e-53 212.6 194 60.3
Atru.chr12.1358 Acer truncatum HOM05D004958 ORTHO05D005983 4.0e-53 211.8 171 63.2
FAN01G2068 Fragaria x ananassa HOM05D004958 ORTHO05D005983 4.0e-53 211.8 166 63.3
Lj3g0000848 Lotus japonicus HOM05D004958 ORTHO05D005983 4.0e-53 211.8 169 63.9
FAN06G2073 Fragaria x ananassa HOM05D004958 ORTHO05D005983 8.9e-53 210.7 171 62.0
FAN10G1939 Fragaria x ananassa HOM05D004958 ORTHO05D005983 8.9e-53 210.7 171 62.0
Peaxi162Scf01294g00034 Petunia axillaris HOM05D004958 ORTHO05D005983 2.0e-52 209.5 164 64.0
Aqoxy5G02043 Aquilegia oxysepala HOM05D004958 ORTHO05D005983 3.4e-52 208.8 171 64.9
MD03G1146200 Malus domestica HOM05D004958 ORTHO05D005983 1.3e-51 206.8 165 66.7
PGR031G1609 Punica granatum HOM05D004958 ORTHO05D005983 1.3e-51 206.8 165 65.5
ATR0757G162 Amborella trichopoda HOM05D004958 ORTHO05D005983 2.2e-51 206.1 165 63.6
Sed0017231 Sechium edule HOM05D004958 ORTHO05D005983 2.2e-51 206.1 165 62.4
PGSC0003DMG400026921 Solanum tuberosum HOM05D004958 ORTHO05D005983 2.9e-51 205.7 170 62.9
SGA_v2.0_scaffold196G40881 Striga asiatica HOM05D004958 ORTHO05D005983 4.9e-51 204.9 165 63.6
MSTRG.1893 Avicennia marina HOM05D004958 ORTHO05D005983 6.4e-51 204.5 165 64.8
FAN03G3010 Fragaria x ananassa HOM05D004958 ORTHO05D005983 6.4e-51 204.5 171 60.2
Medtr5g058150 Medicago truncatula HOM05D004958 ORTHO05D005983 8.3e-51 204.1 165 60.6
Migut.E01294 Erythranthe guttata HOM05D004958 ORTHO05D005983 1.1e-50 203.8 165 62.4
Psat0s646g0120 Pisum sativum HOM05D004958 ORTHO05D005983 1.1e-50 203.8 169 62.1
TWI81G1011 Tripterygium wilfordii HOM05D004958 ORTHO05D005983 1.1e-50 203.8 181 60.2
CAN.G65.155 Capsicum annuum HOM05D004958 ORTHO05D005983 1.4e-50 203.4 170 61.2
Solyc06g073120.4 Solanum lycopersicum HOM05D004958 ORTHO05D005983 1.9e-50 203.0 168 62.5
ClCG08G000800 Citrullus lanatus HOM05D004958 ORTHO05D005983 2.4e-50 202.6 165 61.2
Prupe.8G125000 Prunus persica HOM05D004958 ORTHO05D005983 2.4e-50 202.6 180 61.7
FAN11G1832 Fragaria x ananassa HOM05D000097 ORTHO05D005983 9.2e-50 200.7 159 62.9
Sopen06g029470 Solanum pennellii HOM05D004958 ORTHO05D005983 9.2e-50 200.7 170 61.2
EL10Ac5g12729 Beta vulgaris HOM05D004958 ORTHO05D005983 2.1e-49 199.5 172 60.5
THA.LOC104823571 Tarenaya hassleriana HOM05D004958 ORTHO05D005983 3.5e-49 198.7 169 58.0
Os09g0525200 Oryza sativa ssp. japonica HOM05D004958 ORTHO05D005983 6.0e-49 198.0 168 61.3
Ah.12g057600 Amaranthus hybridus HOM05D004958 ORTHO05D005983 7.8e-49 197.6 171 58.5
TPR.G27805 Trifolium pratense HOM05D004958 ORTHO05D005983 1.0e-48 197.2 169 59.8
ECA240G3664 Erigeron canadensis HOM05D004958 ORTHO05D005983 1.3e-48 196.8 170 58.8
SEGI_09748 Sequoiadendron giganteum HOM05D004958 ORTHO05D005983 5.1e-48 194.9 165 60.0
MELO3C019927.2 Cucumis melo HOM05D004958 ORTHO05D005983 6.6e-48 194.5 165 58.8
vmacro13919 Vaccinium macrocarpon HOM05D004958 ORTHO05D005983 7.3e-47 191.0 165 62.4
COL.COLO4_09338 Corchorus olitorius HOM05D001926 ORTHO05D002121 6.2e-46 188.0 170 62.4
CsaV3_5G039810 Cucumis sativus L. HOM05D004958 ORTHO05D005983 1.4e-45 186.8 196 51.0
AUR62017291 Chenopodium quinoa HOM05D004958 ORTHO05D005983 5.2e-45 184.9 171 56.7
BolC8t52265H Brassica oleracea HOM05D004958 ORTHO05D005983 6.8e-45 184.5 166 57.8
Medtr6g075250 Medicago truncatula HOM05D004958 ORTHO05D005983 6.8e-45 184.5 172 57.0
AL1G24110 Arabidopsis lyrata HOM05D004958 ORTHO05D005983 1.2e-44 183.7 169 56.2
A09p63740 Brassica napus HOM05D004958 ORTHO05D005983 1.5e-44 183.3 166 57.2
BraA09t41722Z Brassica rapa HOM05D004958 ORTHO05D005983 1.5e-44 183.3 166 57.2
BcaB08g34261 Brassica carinata HOM05D004958 ORTHO05D005983 3.4e-44 182.2 166 56.6
Sp1g11240 Schrenkiella parvula HOM05D004958 ORTHO05D005983 5.8e-44 181.4 171 55.0
AT1G12650 Arabidopsis thaliana HOM05D004958 ORTHO05D005983 7.6e-44 181.0 169 55.6
C08p47240 Brassica napus HOM05D004958 ORTHO05D005983 2.9e-43 179.1 171 55.6
Zm00001eb103160 Zea mays HOM05D004958 ORTHO05D005983 8.4e-43 177.6 169 56.8
CARHR012940 Cardamine hirsuta HOM05D004958 ORTHO05D005983 1.4e-42 176.8 166 54.2
Carub.0001s1234 Capsella rubella HOM05D004958 ORTHO05D005983 3.2e-42 175.6 169 53.8
Cc08_g14020 Coffea canephora HOM05D004958 ORTHO05D005983 9.3e-42 174.1 170 55.3
Cfa012106 Carpinus fangiana HOM05D004958 ORTHO05D005983 1.6e-41 173.3 180 53.9
BcaC07g41688 Brassica carinata HOM05D004958 ORTHO05D005983 2.7e-41 172.6 158 57.0
FAN21G2287 Fragaria x ananassa HOM05D000097 ORTHO05D000041 6.0e-41 171.4 138 63.8
Rhsim07G0094600 Rhododendron simsii HOM05D004958 ORTHO05D005983 6.0e-41 171.4 139 64.7
Atru.chr12.1359 Acer truncatum HOM05D004958 ORTHO05D005983 1.9e-39 166.4 150 56.0
CiPaw.12G097900 Carya illinoinensis HOM05D004958 ORTHO05D005983 3.3e-39 165.6 199 49.2
SMO228G0196 Selaginella moellendorffii HOM05D004958 ORTHO05D005983 4.3e-39 165.2 165 52.1
Mapoly0004s0034 Marchantia polymorpha HOM05D004958 ORTHO05D005983 7.3e-39 164.5 172 52.9
AagrBONN_evm.TU.Sc2ySwM_362.2285 Anthoceros agrestis HOM05D004958 ORTHO05D005983 3.6e-38 162.2 169 49.7
Pp3c15_19260 Physcomitrium patens HOM05D004958 ORTHO05D005983 3.6e-38 162.2 166 51.8
MD11G1165500 Malus domestica HOM05D004958 ORTHO05D005983 1.4e-37 160.2 241 44.0
vmacro12796 Vaccinium macrocarpon HOM05D004958 ORTHO05D005983 4.0e-37 158.7 226 45.6
SalBow7G2511 Salvia bowleyana HOM05D004958 ORTHO05D005983 5.3e-37 158.3 149 56.4
Haze_20475 Corylus avellana HOM05D004958 ORTHO05D005983 9.9e-36 154.1 230 43.5
unitig_899.g14861 Utricularia gibba HOM05D004958 ORTHO05D005983 3.8e-35 152.1 197 45.7
Thhalv10008688m.g Eutrema salsugineum HOM05D004958 ORTHO05D005983 1.2e-33 147.1 139 55.4
QL12p017317 Quercus lobata HOM05D004958 ORTHO05D005983 2.1e-33 146.4 241 39.8
CDE02G4341 Ceratophyllum demersum HOM05D004958 ORTHO05D005983 3.5e-33 145.6 87 83.9
Sc22g0000230 Simmondsia chinensis HOM05D004958 ORTHO05D005983 3.5e-33 145.6 121 62.0
Aa31LG1G2030 Aethionema arabicum HOM05D004958 ORTHO05D005983 1.7e-32 143.3 166 48.8
MBI11_g47763_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 7.3e-31 137.9 173 52.6
Sabra01G0083200 Salix brachista HOM05D004958 ORTHO05D005983 6.2e-30 134.8 159 49.7
MBI11_g32389_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 1.1e-29 134.0 182 48.9
MBI11_g12655_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 5.3e-29 131.7 142 57.7
CBR_g12215 Chara braunii HOM05D004958 ORTHO05D005983 3.8e-27 125.6 174 43.7
AUR62010651 Chenopodium quinoa HOM05D004958 ORTHO05D005983 1.9e-26 123.2 171 42.7
Dinv39007 Davidia involucrata HOM05D004958 ORTHO05D005983 7.9e-25 117.9 82 70.7
Eucgr.L01965 Eucalyptus grandis HOM05D004958 ORTHO05D005983 3.0e-24 115.9 82 69.5
Cre09.g401663 Chlamydomonas reinhardtii HOM05D004958 ORTHO05D005983 3.3e-23 112.5 168 41.7
Zm00001eb297680 Zea mays HOM05D004958 ORTHO05D005983 7.4e-23 111.3 95 60.0
Phvul.009G247000 Phaseolus vulgaris HOM05D004958 ORTHO05D005983 1.3e-19 100.5 130 46.9
Aqoxy60s002 Aquilegia oxysepala HOM05D004958 ORTHO05D005983 4.9e-19 98.6 126 48.4
PRCOL_00004135 Prasinoderma coloniale HOM05D004958 ORTHO05D005983 1.9e-18 96.7 163 35.0
SEGI_22925 Sequoiadendron giganteum HOM05D004958 ORTHO05D005983 9.3e-18 94.4 86 59.3
A09p63730 Brassica napus HOM05D007482 ORTHO05D003038 1.9e-15 86.7 116 43.1
Cfa023436 Carpinus fangiana HOM05D004958 ORTHO05D005983 3.4e-12 75.9 166 29.5
Cpa.g.sc53.73 Carica papaya HOM05D004958 ORTHO05D005983 4.2e-10 68.9 49 67.3
Zm00001eb282240 Zea mays HOM05D004142 ORTHO05D005411 2.1e-09 66.6 55 63.6
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 2.1e-09 66.6 56 57.1
Zm00001eb199630 Zea mays HOM05D004958 ORTHO05D005983 2.7e-09 66.2 56 57.1
Haze_08945 Corylus avellana HOM05D004958 ORTHO05D005983 6.1e-09 65.1 72 50.0
Zm00001eb112060 Zea mays HOM05D004142 ORTHO05D005983 1.0e-08 64.3 55 61.8
FvH4_3g24970 Fragaria vesca HOM05D004958 ORTHO05D005983 8.7e-08 61.2 39 76.9
TAR636G1581 Trochodendron aralioides HOM05D004958 ORTHO05D005983 1.9e-07 60.1 38 78.9
C08p47230 Brassica napus HOM05D007482 ORTHO05D003038 1.3e-06 57.4 88 46.6
BcaB03g13174 Brassica carinata HOM05D004958 ORTHO05D005983 1.6e-06 57.0 49 59.2


User provided reference genes

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