Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g31491_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 4.2e-145 518.1 274 100.0
MBI11_g40802_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 4.1e-92 342.0 224 81.7
MBI11_g41127_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 4.1e-92 342.0 217 84.3
MBI11_g47761_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 1.2e-75 287.3 184 82.6
MBI11_g41124_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 2.3e-74 283.1 183 82.0
MBI04_g02075_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 3.3e-73 279.3 226 70.4
GSVIVG01019856001 Vitis vinifera HOM05D004958 ORTHO05D005983 1.6e-72 276.9 229 65.5
Duzib068G0251 Durio zibethinus HOM05D004958 ORTHO05D005983 3.6e-72 275.8 226 65.5
Nn6g34244 Nelumbo nucifera HOM05D004958 ORTHO05D005983 6.2e-72 275.0 226 64.2
MBI11_g32389_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 1.5e-70 270.4 246 63.8
Thecc.03G271700 Theobroma cacao HOM05D004958 ORTHO05D005983 9.9e-70 267.7 228 64.5
Lalb_Chr07g0189581 Lupinus albus HOM05D004958 ORTHO05D005983 6.4e-69 265.0 225 63.1
Manes.01G066700 Manihot esculenta HOM05D004958 ORTHO05D005983 1.4e-68 263.8 228 62.7
Lalb_Chr12g0208371 Lupinus albus HOM05D004958 ORTHO05D005983 1.9e-68 263.5 224 62.9
Lalb_Chr12g0208451 Lupinus albus HOM05D004958 ORTHO05D005983 1.9e-68 263.5 224 62.9
Phvul.010G049100 Phaseolus vulgaris HOM05D004958 ORTHO05D005983 2.4e-68 263.1 229 61.6
Eucgr.D01919 Eucalyptus grandis HOM05D004958 ORTHO05D005983 3.2e-68 262.7 223 63.2
Phvul.009G080900 Phaseolus vulgaris HOM05D004958 ORTHO05D005983 7.1e-68 261.5 229 61.1
Glyma.07G082900 Glycine max HOM05D004958 ORTHO05D005983 1.2e-67 260.8 226 63.3
DCAR_008420 Daucus carota HOM05D004958 ORTHO05D005983 3.5e-67 259.2 226 61.1
Nitab4.5_0001586g0220 Nicotiana tabacum HOM05D004958 ORTHO05D005983 3.5e-67 259.2 225 60.9
VMungo0331G1538 Vigna mungo HOM05D004958 ORTHO05D005983 6.0e-67 258.5 229 61.1
Nitab4.5_0002553g0040 Nicotiana tabacum HOM05D004958 ORTHO05D005983 7.8e-67 258.1 225 60.9
Hund11528 Selenicereus undatus HOM05D004958 ORTHO05D005983 7.8e-67 258.1 232 62.1
FvH4_3g25070 Fragaria vesca HOM05D000097 ORTHO05D005983 1.0e-66 257.7 231 60.6
CSS0008368 Camellia sinensis var. sinensis HOM05D004958 ORTHO05D005983 1.3e-66 257.3 228 60.1
Prupe.6G131000 Prunus persica HOM05D004958 ORTHO05D005983 2.3e-66 256.5 225 62.7
RcHm_v2.0_Chr5g0045251 Rosa chinensis HOM05D004958 ORTHO05D005983 2.3e-66 256.5 226 60.2
Actinidia27408 Actinidia chinensis HOM05D004958 ORTHO05D005983 5.1e-66 255.4 228 61.4
Nitab4.5_0003994g0020 Nicotiana tabacum HOM05D004958 ORTHO05D005983 6.6e-66 255.0 225 60.0
Ca_05359_v3 Cicer arietinum L. HOM05D004958 ORTHO05D005983 8.6e-66 254.6 225 60.0
Ca_24641_v3 Cicer arietinum L. HOM05D004958 ORTHO05D005983 8.6e-66 254.6 227 59.9
Lsat_1_v5_gn_6_87641 Lactuca sativa HOM05D004958 ORTHO05D005983 8.6e-66 254.6 229 60.3
FvH4_7g07500 Fragaria vesca HOM05D004958 ORTHO05D005983 1.1e-65 254.2 232 59.5
Gohir.D11G021000 Gossypium hirsutum HOM05D004958 ORTHO05D005983 1.5e-65 253.8 221 62.0
Hma1.2p1_0514F.1_g170070 Hydrangea macrophylla HOM05D004958 ORTHO05D005983 1.9e-65 253.4 227 60.4
HPP92_003759 Vanilla planifolia HOM05D004958 ORTHO05D005983 2.5e-65 253.1 224 60.7
Gorai.007G022300 Gossypium raimondii HOM05D004958 ORTHO05D005983 3.3e-65 252.7 221 61.5
Potri.001G110000 Populus trichocarpa HOM05D004958 ORTHO05D005983 3.3e-65 252.7 258 55.0
arahy.Tifrunner.gnm1.ann1.BCQ50G Arachis hypogaea HOM05D004958 ORTHO05D005983 7.3e-65 251.5 226 61.1
FAN06G2073 Fragaria x ananassa HOM05D004958 ORTHO05D005983 7.3e-65 251.5 232 59.1
FAN10G1939 Fragaria x ananassa HOM05D004958 ORTHO05D005983 7.3e-65 251.5 232 59.1
Gohir.A11G021300 Gossypium hirsutum HOM05D004958 ORTHO05D005983 9.5e-65 251.1 221 61.5
Ciclev10021851m.g Citrus clementina HOM05D004958 ORTHO05D005983 1.2e-64 250.8 226 58.4
Nitab4.5_0003113g0020 Nicotiana tabacum HOM05D004958 ORTHO05D005983 1.2e-64 250.8 228 57.9
FAN01G2068 Fragaria x ananassa HOM05D004958 ORTHO05D005983 2.1e-64 250.0 224 59.8
Medtr5g058150 Medicago truncatula HOM05D004958 ORTHO05D005983 2.8e-64 249.6 220 60.0
Glyma.03G021100 Glycine max HOM05D004958 ORTHO05D005983 8.1e-64 248.1 249 57.4
Lj3g0000848 Lotus japonicus HOM05D004958 ORTHO05D005983 1.1e-63 247.7 224 59.8
Atru.chr12.1358 Acer truncatum HOM05D004958 ORTHO05D005983 1.4e-63 247.3 229 58.5
Sed0017231 Sechium edule HOM05D004958 ORTHO05D005983 1.8e-63 246.9 232 58.2
FAN03G3010 Fragaria x ananassa HOM05D004958 ORTHO05D005983 5.2e-63 245.4 232 57.8
PGR031G1609 Punica granatum HOM05D004958 ORTHO05D005983 5.2e-63 245.4 223 61.4
Prupe.8G125000 Prunus persica HOM05D004958 ORTHO05D005983 8.9e-63 244.6 235 59.6
TPR.G27805 Trifolium pratense HOM05D004958 ORTHO05D005983 8.9e-63 244.6 225 58.2
ATR0757G162 Amborella trichopoda HOM05D004958 ORTHO05D005983 1.2e-62 244.2 223 59.2
ClCG08G000800 Citrullus lanatus HOM05D004958 ORTHO05D005983 1.2e-62 244.2 266 52.6
Aqoxy5G02043 Aquilegia oxysepala HOM05D004958 ORTHO05D005983 3.4e-62 242.7 230 58.7
Psat0s646g0120 Pisum sativum HOM05D004958 ORTHO05D005983 3.4e-62 242.7 224 58.5
MD03G1146200 Malus domestica HOM05D004958 ORTHO05D005983 4.4e-62 242.3 229 60.7
PGSC0003DMG400026921 Solanum tuberosum HOM05D004958 ORTHO05D005983 4.4e-62 242.3 228 58.3
PSO782G2900 Papaver somniferum HOM05D004958 ORTHO05D005983 1.3e-61 240.7 223 59.6
Solyc06g073120.4 Solanum lycopersicum HOM05D004958 ORTHO05D005983 1.7e-61 240.4 226 58.0
Sopen06g029470 Solanum pennellii HOM05D004958 ORTHO05D005983 2.2e-61 240.0 228 57.5
MELO3C019927.2 Cucumis melo HOM05D004958 ORTHO05D005983 2.9e-61 239.6 232 56.0
CsaV3_5G039810 Cucumis sativus L. HOM05D004958 ORTHO05D005983 4.9e-61 238.8 242 54.1
PSO478G4928 Papaver somniferum HOM05D004958 ORTHO05D005983 4.9e-61 238.8 227 59.5
SGA_v2.0_scaffold196G40881 Striga asiatica HOM05D004958 ORTHO05D005983 8.4e-61 238.0 223 57.8
Ah.12g057600 Amaranthus hybridus HOM05D004958 ORTHO05D005983 3.2e-60 236.1 229 55.5
CAN.G65.155 Capsicum annuum HOM05D004958 ORTHO05D005983 4.1e-60 235.7 228 55.7
TWI81G1011 Tripterygium wilfordii HOM05D004958 ORTHO05D005983 4.1e-60 235.7 236 55.9
Migut.E01294 Erythranthe guttata HOM05D004958 ORTHO05D005983 5.4e-60 235.3 223 57.8
MSTRG.1893 Avicennia marina HOM05D004958 ORTHO05D005983 2.1e-59 233.4 223 57.4
Peaxi162Scf01294g00034 Petunia axillaris HOM05D004958 ORTHO05D005983 1.7e-58 230.3 223 56.5
SEGI_09748 Sequoiadendron giganteum HOM05D004958 ORTHO05D005983 1.1e-57 227.6 227 54.2
ECA240G3664 Erigeron canadensis HOM05D004958 ORTHO05D005983 1.5e-57 227.3 228 54.8
EL10Ac5g12729 Beta vulgaris HOM05D004958 ORTHO05D005983 3.3e-57 226.1 231 56.3
FAN11G1832 Fragaria x ananassa HOM05D000097 ORTHO05D005983 1.6e-56 223.8 231 55.4
COL.COLO4_09338 Corchorus olitorius HOM05D001926 ORTHO05D002121 2.1e-56 223.4 228 57.9
vmacro13919 Vaccinium macrocarpon HOM05D004958 ORTHO05D005983 2.8e-56 223.0 223 56.5
Cfa012106 Carpinus fangiana HOM05D004958 ORTHO05D005983 1.2e-54 217.6 232 54.3
THA.LOC104823571 Tarenaya hassleriana HOM05D004958 ORTHO05D005983 1.2e-54 217.6 220 53.2
Medtr6g075250 Medicago truncatula HOM05D004958 ORTHO05D005983 4.4e-54 215.7 230 52.6
Os09g0525200 Oryza sativa ssp. japonica HOM05D004958 ORTHO05D005983 3.8e-53 212.6 226 54.0
Cc08_g14020 Coffea canephora HOM05D004958 ORTHO05D005983 4.6e-51 205.7 227 53.3
AL1G24110 Arabidopsis lyrata HOM05D004958 ORTHO05D005983 2.3e-50 203.4 218 51.4
QL12p017317 Quercus lobata HOM05D004958 ORTHO05D005983 1.1e-49 201.1 286 44.1
AT1G12650 Arabidopsis thaliana HOM05D004958 ORTHO05D005983 1.5e-49 200.7 220 50.5
Rhsim07G0094600 Rhododendron simsii HOM05D004958 ORTHO05D005983 1.5e-49 200.7 197 57.4
CARHR012940 Cardamine hirsuta HOM05D004958 ORTHO05D005983 2.5e-49 199.9 215 50.2
Sp1g11240 Schrenkiella parvula HOM05D004958 ORTHO05D005983 5.6e-49 198.7 223 49.8
MD11G1165500 Malus domestica HOM05D004958 ORTHO05D005983 2.1e-48 196.8 285 46.0
SalBow7G2511 Salvia bowleyana HOM05D004958 ORTHO05D005983 4.8e-48 195.7 191 59.7
BolC8t52265H Brassica oleracea HOM05D004958 ORTHO05D005983 6.2e-48 195.3 215 50.2
Zm00001eb103160 Zea mays HOM05D004958 ORTHO05D005983 6.2e-48 195.3 227 50.2
Haze_20475 Corylus avellana HOM05D004958 ORTHO05D005983 8.1e-48 194.9 276 44.9
unitig_899.g14861 Utricularia gibba HOM05D004958 ORTHO05D005983 1.1e-47 194.5 242 48.3
A09p63740 Brassica napus HOM05D004958 ORTHO05D005983 1.4e-47 194.1 215 49.8
BraA09t41722Z Brassica rapa HOM05D004958 ORTHO05D005983 1.4e-47 194.1 215 49.8
BcaB08g34261 Brassica carinata HOM05D004958 ORTHO05D005983 1.8e-47 193.7 236 46.6
Carub.0001s1234 Capsella rubella HOM05D004958 ORTHO05D005983 2.4e-47 193.4 227 47.6
C08p47240 Brassica napus HOM05D004958 ORTHO05D005983 5.3e-47 192.2 218 49.5
CDE02G4341 Ceratophyllum demersum HOM05D004958 ORTHO05D005983 2.6e-46 189.9 132 73.5
vmacro12796 Vaccinium macrocarpon HOM05D004958 ORTHO05D005983 3.4e-46 189.5 284 44.0
AUR62017291 Chenopodium quinoa HOM05D004958 ORTHO05D005983 5.8e-46 188.7 185 55.1
SMO228G0196 Selaginella moellendorffii HOM05D004958 ORTHO05D005983 5.8e-46 188.7 215 48.8
Pp3c15_19260 Physcomitrium patens HOM05D004958 ORTHO05D005983 7.6e-46 188.3 224 48.2
Sc22g0000230 Simmondsia chinensis HOM05D004958 ORTHO05D005983 2.2e-45 186.8 173 60.1
FAN21G2287 Fragaria x ananassa HOM05D000097 ORTHO05D000041 6.4e-45 185.3 182 58.2
AagrBONN_evm.TU.Sc2ySwM_362.2285 Anthoceros agrestis HOM05D004958 ORTHO05D005983 4.2e-44 182.6 224 47.3
BcaC07g41688 Brassica carinata HOM05D004958 ORTHO05D005983 4.2e-44 182.6 205 49.8
Mapoly0004s0034 Marchantia polymorpha HOM05D004958 ORTHO05D005983 7.1e-44 181.8 259 43.2
CiPaw.12G097900 Carya illinoinensis HOM05D004958 ORTHO05D005983 1.2e-43 181.0 260 44.6
Sabra01G0083200 Salix brachista HOM05D004958 ORTHO05D005983 2.7e-43 179.9 205 51.7
Atru.chr12.1359 Acer truncatum HOM05D004958 ORTHO05D005983 1.4e-39 167.5 229 44.1
Eucgr.L01965 Eucalyptus grandis HOM05D004958 ORTHO05D005983 1.4e-39 167.5 127 67.7
Aa31LG1G2030 Aethionema arabicum HOM05D004958 ORTHO05D005983 6.9e-39 165.2 215 46.0
Thhalv10008688m.g Eutrema salsugineum HOM05D004958 ORTHO05D005983 2.0e-38 163.7 196 48.5
Dinv39007 Davidia involucrata HOM05D004958 ORTHO05D005983 3.4e-38 162.9 127 67.7
AUR62010651 Chenopodium quinoa HOM05D004958 ORTHO05D005983 6.4e-37 158.7 229 43.7
Cre09.g401663 Chlamydomonas reinhardtii HOM05D004958 ORTHO05D005983 7.9e-27 125.2 235 37.9
CBR_g12215 Chara braunii HOM05D004958 ORTHO05D005983 2.3e-26 123.6 180 42.8
MBI11_g12655_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 1.1e-25 121.3 162 49.4
Phvul.009G247000 Phaseolus vulgaris HOM05D004958 ORTHO05D005983 3.7e-24 116.3 220 40.0
MBI11_g47763_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 7.6e-22 108.6 186 43.0
Haze_08945 Corylus avellana HOM05D004958 ORTHO05D005983 1.0e-21 108.2 118 51.7
PRCOL_00004135 Prasinoderma coloniale HOM05D004958 ORTHO05D005983 1.2e-19 101.3 184 35.3
FvH4_3g24970 Fragaria vesca HOM05D004958 ORTHO05D005983 2.7e-19 100.1 82 68.3
Zm00001eb297680 Zea mays HOM05D004958 ORTHO05D005983 6.1e-19 99.0 108 50.0
TAR636G1581 Trochodendron aralioides HOM05D004958 ORTHO05D005983 1.4e-18 97.8 83 65.1
Aqoxy60s002 Aquilegia oxysepala HOM05D004958 ORTHO05D005983 7.4e-17 92.0 139 44.6
SEGI_22925 Sequoiadendron giganteum HOM05D004958 ORTHO05D005983 3.4e-14 83.2 98 49.0
A09p63730 Brassica napus HOM05D007482 ORTHO05D003038 3.8e-13 79.7 99 49.5
QL02p071798 Quercus lobata HOM05D004958 ORTHO05D005983 8.5e-13 78.6 184 33.7
FAN11G3948 Fragaria x ananassa HOM05D004958 ORTHO05D005983 2.5e-12 77.0 69 65.2
Cfa023436 Carpinus fangiana HOM05D004958 ORTHO05D005983 4.2e-12 76.3 189 27.5
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 4.7e-11 72.8 58 60.3
Zm00001eb199630 Zea mays HOM05D004958 ORTHO05D005983 5.7e-09 65.9 55 58.2
Cpa.g.sc53.73 Carica papaya HOM05D004958 ORTHO05D005983 2.2e-08 63.9 47 61.7
Aqoxy107s001 Aquilegia oxysepala HOM05D004958 ORTHO05D005983 2.4e-07 60.5 76 50.0
MBI11_g31961_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D241456 4.1e-07 59.7 158 35.4
Oeu011662.1 Olea europaea HOM05D004958 ORTHO05D005983 1.2e-06 58.2 73 53.4


User provided reference genes

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