Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI09_g21103_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 1.6e-74 282.7 150 100.0
MBI17_g19035_MAGBIO Magnolia biondii HOM05D013691 ORTHO05D004199 1.8e-28 129.8 134 63.4
MBI05_g00255_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 1.2e-21 107.1 99 66.7
MBI12_g17812_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 5.1e-20 101.7 60 91.7
Ciclev10004183m.g Citrus clementina HOM05D002696 ORTHO05D003940 5.7e-19 98.2 61 90.2
MBI10_g30245_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 7.4e-19 97.8 92 67.4
Zm00001eb144310 Zea mays HOM05D002696 ORTHO05D003940 9.7e-19 97.4 62 87.1
EL10Ac2g04892 Beta vulgaris HOM05D002696 ORTHO05D003940 1.3e-18 97.1 60 90.0
AUR62012301 Chenopodium quinoa HOM05D002696 ORTHO05D003940 1.3e-18 97.1 60 90.0
AUR62022940 Chenopodium quinoa HOM05D002696 ORTHO05D003940 1.3e-18 97.1 60 90.0
Sed0008600 Sechium edule HOM05D002696 ORTHO05D003940 1.3e-18 97.1 60 90.0
Sabra01G0096100 Salix brachista HOM05D002696 ORTHO05D003940 1.6e-18 96.7 61 88.5
MD01G1182300 Malus domestica HOM05D002696 ORTHO05D003940 2.2e-18 96.3 59 91.5
Os01g0904400 Oryza sativa ssp. japonica HOM05D002696 ORTHO05D003940 2.2e-18 96.3 62 87.1
Potri.001G125000 Populus trichocarpa HOM05D002696 ORTHO05D003940 2.2e-18 96.3 59 91.5
Prupe.2G276400 Prunus persica HOM05D002696 ORTHO05D003940 2.2e-18 96.3 59 91.5
QL09p005526 Quercus lobata HOM05D002696 ORTHO05D003940 2.2e-18 96.3 59 91.5
QL09p005648 Quercus lobata HOM05D002696 ORTHO05D003940 2.2e-18 96.3 59 91.5
CANSAT56G0989 Cannabis sativa HOM05D002696 ORTHO05D003940 2.8e-18 95.9 59 89.8
ClCG05G007340 Citrullus lanatus HOM05D002696 ORTHO05D003940 2.8e-18 95.9 60 90.0
Hund13894 Selenicereus undatus HOM05D002696 ORTHO05D003940 2.8e-18 95.9 60 88.3
MBI08_g12708_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D000022 3.7e-18 95.5 60 90.0
Oeu022477.1 Olea europaea HOM05D002696 ORTHO05D003940 3.7e-18 95.5 61 88.5
PSO339G0313 Papaver somniferum HOM05D002696 ORTHO05D003940 3.7e-18 95.5 62 87.1
PSO384G2493 Papaver somniferum HOM05D002696 ORTHO05D003940 3.7e-18 95.5 62 87.1
Ah.16g103870 Amaranthus hybridus HOM05D002696 ORTHO05D003940 4.8e-18 95.1 60 88.3
Atru.chr1.739 Acer truncatum HOM05D002696 ORTHO05D003940 6.3e-18 94.7 61 86.9
Cfa008155 Carpinus fangiana HOM05D002696 ORTHO05D003940 6.3e-18 94.7 59 89.8
CiPaw.04G059400 Carya illinoinensis HOM05D002696 ORTHO05D003940 6.3e-18 94.7 59 89.8
Haze_13890 Corylus avellana HOM05D002696 ORTHO05D003940 6.3e-18 94.7 59 89.8
FAN03G1522 Fragaria x ananassa HOM05D002696 ORTHO05D003940 6.3e-18 94.7 61 88.5
MBI02_g02068_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 6.3e-18 94.7 61 86.9
MBI12_g22449_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 6.3e-18 94.7 57 80.7
Nn4g25061 Nelumbo nucifera HOM05D002696 ORTHO05D003940 6.3e-18 94.7 61 86.9
arahy.Tifrunner.gnm1.ann1.BTDY3I Arachis hypogaea HOM05D002696 ORTHO05D003940 8.2e-18 94.4 59 89.8
arahy.Tifrunner.gnm1.ann1.P8M8R5 Arachis hypogaea HOM05D002696 ORTHO05D003940 8.2e-18 94.4 59 89.8
COL.COLO4_14108 Corchorus olitorius HOM05D002696 ORTHO05D003940 8.2e-18 94.4 60 86.7
Duzib068G1251 Durio zibethinus HOM05D002696 ORTHO05D003940 8.2e-18 94.4 60 86.7
Gohir.A03G059100 Gossypium hirsutum HOM05D002696 ORTHO05D003940 8.2e-18 94.4 60 86.7
Gohir.D03G107000 Gossypium hirsutum HOM05D002696 ORTHO05D003940 8.2e-18 94.4 60 86.7
Gorai.003G113400 Gossypium raimondii HOM05D002696 ORTHO05D003940 8.2e-18 94.4 60 86.7
MBI14_g23360_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 8.2e-18 94.4 61 86.9
MD07G1252800 Malus domestica HOM05D002696 ORTHO05D003940 8.2e-18 94.4 59 89.8
Psat4g148760 Pisum sativum HOM05D002696 ORTHO05D003940 8.2e-18 94.4 59 89.8
Potri.003G108400 Populus trichocarpa HOM05D002696 ORTHO05D003940 8.2e-18 94.4 59 89.8
SGA_v2.0_scaffold2G01216 Striga asiatica HOM05D002696 ORTHO05D003940 8.2e-18 94.4 61 86.9
CSS0019414 Camellia sinensis var. sinensis HOM05D002696 ORTHO05D003940 1.1e-17 94.0 59 89.8
CSS0021515 Camellia sinensis var. sinensis HOM05D002696 ORTHO05D003940 1.1e-17 94.0 59 89.8
Ca_23897_v3 Cicer arietinum L. HOM05D002696 ORTHO05D003940 1.1e-17 94.0 59 88.1
FAN01G1209 Fragaria x ananassa HOM05D002696 ORTHO05D003940 1.1e-17 94.0 61 86.9
FAN06G3257 Fragaria x ananassa HOM05D002696 ORTHO05D003940 1.1e-17 94.0 61 86.9
FAN06G4355 Fragaria x ananassa HOM05D002696 ORTHO05D003940 1.1e-17 94.0 61 86.9
FAN06G4966 Fragaria x ananassa HOM05D002696 ORTHO05D003940 1.1e-17 94.0 61 86.9
Lj1A979T80 Lonicera japonica HOM05D002696 ORTHO05D003940 1.1e-17 94.0 59 89.8
Phvul.011G211100 Phaseolus vulgaris HOM05D002696 ORTHO05D003940 1.1e-17 94.0 59 88.1
RcHm_v2.0_Chr1g0374201 Rosa chinensis HOM05D002696 ORTHO05D003940 1.1e-17 94.0 61 86.9
Sc10g0002620 Simmondsia chinensis HOM05D002696 ORTHO05D003940 1.1e-17 94.0 60 86.7
TAR633G0051 Trochodendron aralioides HOM05D002696 ORTHO05D003940 1.1e-17 94.0 59 89.8
TAR633G1694 Trochodendron aralioides HOM05D002696 ORTHO05D003940 1.1e-17 94.0 59 89.8
CAN.G48.39 Capsicum annuum HOM05D002696 ORTHO05D003940 1.4e-17 93.6 61 85.2
CsaV3_3G016100 Cucumis sativus L. HOM05D002696 ORTHO05D003940 1.4e-17 93.6 60 88.3
Dinv06564 Davidia involucrata HOM05D002696 ORTHO05D003940 1.4e-17 93.6 59 88.1
Eucgr.A02895 Eucalyptus grandis HOM05D002696 ORTHO05D003940 1.4e-17 93.6 59 89.8
Lsat_1_v5_gn_8_8781 Lactuca sativa HOM05D002696 ORTHO05D003940 1.4e-17 93.6 59 89.8
Nitab4.5_0002816g0060 Nicotiana tabacum HOM05D002696 ORTHO05D003940 1.4e-17 93.6 61 85.2
Nitab4.5_0003490g0070 Nicotiana tabacum HOM05D002696 ORTHO05D003940 1.4e-17 93.6 61 85.2
Solyc03g093260.3 Solanum lycopersicum HOM05D002696 ORTHO05D003940 1.4e-17 93.6 61 85.2
Sopen03g024050 Solanum pennellii HOM05D002696 ORTHO05D003940 1.4e-17 93.6 61 85.2
MSTRG.8828 Avicennia marina HOM05D002696 ORTHO05D003940 1.8e-17 93.2 61 85.2
MBI18_g32983_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 1.8e-17 93.2 58 89.7
SalBow8G1580 Salvia bowleyana HOM05D002696 ORTHO05D003940 1.8e-17 93.2 61 86.9
THA.LOC104818260 Tarenaya hassleriana HOM05D002696 ORTHO05D003940 1.8e-17 93.2 59 89.8
THA.LOC104821413 Tarenaya hassleriana HOM05D002696 ORTHO05D003940 1.8e-17 93.2 59 89.8
BcaC01g01822 Brassica carinata HOM05D002696 ORTHO05D003940 2.4e-17 92.8 62 85.5
A06p20190 Brassica napus HOM05D002696 ORTHO05D003940 2.4e-17 92.8 62 85.5
C03p71600 Brassica napus HOM05D002696 ORTHO05D003940 2.4e-17 92.8 62 85.5
BolC3t19451H Brassica oleracea HOM05D002696 ORTHO05D003940 2.4e-17 92.8 62 85.5
BraA06t25103Z Brassica rapa HOM05D002696 ORTHO05D003940 2.4e-17 92.8 62 85.5
Cpa.g.sc3.331 Carica papaya HOM05D002696 ORTHO05D003940 2.4e-17 92.8 59 88.1
FvH4_7g25682 Fragaria vesca HOM05D002696 ORTHO05D003940 2.4e-17 92.8 61 85.2
Lj3g0024722 Lotus japonicus HOM05D002696 ORTHO05D003940 2.4e-17 92.8 59 88.1
Lalb_Chr01g0008021 Lupinus albus HOM05D002696 ORTHO05D003940 2.4e-17 92.8 59 88.1
Lalb_Chr03g0034121 Lupinus albus HOM05D002696 ORTHO05D003940 2.4e-17 92.8 59 86.4
Medtr8g037325 Medicago truncatula HOM05D002696 ORTHO05D003940 2.4e-17 92.8 59 88.1
TPR.G1877 Trifolium pratense HOM05D002696 ORTHO05D003940 2.4e-17 92.8 59 88.1
VMungo1127G1101 Vigna mungo HOM05D002696 ORTHO05D003940 2.4e-17 92.8 61 85.2
Aa31LG4G16260 Aethionema arabicum HOM05D002696 ORTHO05D003940 3.1e-17 92.4 62 83.9
CSS0022672 Camellia sinensis var. sinensis HOM05D002696 ORTHO05D003940 3.1e-17 92.4 59 86.4
Cc06_g23360 Coffea canephora HOM05D002696 ORTHO05D003940 3.1e-17 92.4 59 88.1
ECA234G3187 Erigeron canadensis HOM05D002696 ORTHO05D003940 3.1e-17 92.4 59 88.1
Rhsim03G0166400 Rhododendron simsii HOM05D002696 ORTHO05D003940 3.1e-17 92.4 59 88.1
Thecc.03G154800 Theobroma cacao HOM05D002696 ORTHO05D003940 3.1e-17 92.4 59 86.4
vmacro06809 Vaccinium macrocarpon HOM05D002696 ORTHO05D003940 3.1e-17 92.4 59 88.1
HPP92_013639 Vanilla planifolia HOM05D002696 ORTHO05D003940 3.1e-17 92.4 62 82.3
Atru.chr8.1045 Acer truncatum HOM05D002696 ORTHO05D003940 4.1e-17 92.0 61 85.2
ATR0618G100 Amborella trichopoda HOM05D002696 ORTHO05D003940 5.3e-17 91.7 61 85.2
Migut.F00482 Erythranthe guttata HOM05D002696 ORTHO05D003940 5.3e-17 91.7 61 85.2
Thhalv10010077m.g Eutrema salsugineum HOM05D002696 ORTHO05D003940 5.3e-17 91.7 62 83.9
Glyma.12G236600 Glycine max HOM05D002696 ORTHO05D003940 5.3e-17 91.7 59 86.4
HanXRQChr08g0223041 Helianthus annuus HOM05D002696 ORTHO05D003940 5.3e-17 91.7 59 88.1
Manes.14G036500 Manihot esculenta HOM05D002696 ORTHO05D003940 5.3e-17 91.7 59 86.4
Sp5g14420 Schrenkiella parvula HOM05D002696 ORTHO05D003940 6.9e-17 91.3 62 83.9
BcaB02g09643 Brassica carinata HOM05D002696 ORTHO05D003940 9.0e-17 90.9 62 83.9
BcaC01g02465 Brassica carinata HOM05D002696 ORTHO05D003940 9.0e-17 90.9 62 83.9
A06p29110 Brassica napus HOM05D002696 ORTHO05D003940 9.0e-17 90.9 62 83.9
C03p64490 Brassica napus HOM05D002696 ORTHO05D003940 9.0e-17 90.9 62 83.9
BraA06t25859Z Brassica rapa HOM05D002696 ORTHO05D003940 9.0e-17 90.9 62 83.9
Glyma.13G202100 Glycine max HOM05D002696 ORTHO05D003940 9.0e-17 90.9 59 86.4
GSVIVG01018715001 Vitis vinifera HOM05D002696 ORTHO05D003940 9.0e-17 90.9 61 83.6
BcaB01g00921 Brassica carinata HOM05D002696 ORTHO05D003940 1.2e-16 90.5 62 83.9
CARHR276190 Cardamine hirsuta HOM05D002696 ORTHO05D003940 1.2e-16 90.5 62 82.3
AL5G26680 Arabidopsis lyrata HOM05D002696 ORTHO05D003940 1.5e-16 90.1 62 83.9
CSS0048401 Camellia sinensis var. sinensis HOM05D002696 ORTHO05D011600 2.0e-16 89.7 59 84.7
SEGI_01462 Sequoiadendron giganteum HOM05D002696 ORTHO05D003940 2.0e-16 89.7 62 82.3
SEGI_28050 Sequoiadendron giganteum HOM05D002696 ORTHO05D003940 2.0e-16 89.7 62 82.3
AL8G39240 Arabidopsis lyrata HOM05D002696 ORTHO05D003940 2.6e-16 89.4 61 83.6
AT3G47460 Arabidopsis thaliana HOM05D002696 ORTHO05D003940 2.6e-16 89.4 62 82.3
AT5G62410 Arabidopsis thaliana HOM05D002696 ORTHO05D003940 2.6e-16 89.4 61 83.6
arahy.Tifrunner.gnm1.ann1.REY0GV Arachis hypogaea HOM05D002696 ORTHO05D011600 2.6e-16 89.4 58 81.0
BolC3t18703H Brassica oleracea HOM05D002696 ORTHO05D003940 2.6e-16 89.4 62 82.3
Carub.0008s2309 Capsella rubella HOM05D002696 ORTHO05D003940 2.6e-16 89.4 61 83.6
FAN06G4003 Fragaria x ananassa HOM05D002696 ORTHO05D003940 2.6e-16 89.4 60 85.0
Peaxi162Scf00241g00034 Petunia axillaris HOM05D002696 ORTHO05D003940 2.6e-16 89.4 61 82.0
SGA_v2.0_scaffold44G16551 Striga asiatica HOM05D002696 ORTHO05D003940 2.6e-16 89.4 73 72.6
CARHR156100 Cardamine hirsuta HOM05D002696 ORTHO05D003940 3.4e-16 89.0 60 85.0
MBI05_g15481_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 4.5e-16 88.6 61 83.6
CSS0006386 Camellia sinensis var. sinensis HOM05D002696 ORTHO05D011600 5.9e-16 88.2 59 83.1
CSS0008974 Camellia sinensis var. sinensis HOM05D002696 ORTHO05D011600 5.9e-16 88.2 59 83.1
Carub.0005s1355 Capsella rubella HOM05D002696 ORTHO05D003940 7.6e-16 87.8 62 80.6
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.6e-16 87.8 61 83.6
Thhalv10003541m.g Eutrema salsugineum HOM05D002696 ORTHO05D003940 1.0e-15 87.4 62 82.3
Sp2g25590 Schrenkiella parvula HOM05D002696 ORTHO05D003940 1.0e-15 87.4 62 82.3
HanXRQChr05g0144341 Helianthus annuus HOM05D002696 ORTHO05D003940 1.7e-15 86.7 59 83.1
PGR042G0896 Punica granatum HOM05D002696 ORTHO05D003940 1.7e-15 86.7 59 84.7
Gohir.A07G041900 Gossypium hirsutum HOM05D002696 ORTHO05D003940 1.1e-14 84.0 62 77.4
Gohir.D07G046000 Gossypium hirsutum HOM05D002696 ORTHO05D003940 1.1e-14 84.0 62 77.4
MBI14_g00416_MAGBIO Magnolia biondii HOM05D002410 ORTHO05D011600 1.1e-14 84.0 55 87.3
FAN06G3863 Fragaria x ananassa HOM05D002696 ORTHO05D011600 1.4e-14 83.6 53 88.7
CSS0033325 Camellia sinensis var. sinensis HOM05D002696 ORTHO05D011600 2.5e-14 82.8 98 58.2
Gorai.001G049100 Gossypium raimondii HOM05D002696 ORTHO05D003940 2.5e-14 82.8 62 75.8
PSO423G0248 Papaver somniferum HOM05D002696 ORTHO05D003940 2.5e-14 82.8 62 75.8
DCAR_020185 Daucus carota HOM05D002696 ORTHO05D003940 7.2e-14 81.3 59 78.0
Duzib205G1343 Durio zibethinus HOM05D002696 ORTHO05D003940 9.3e-14 80.9 60 76.7
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 1.6e-13 80.1 52 80.8
MBI18_g38010_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 1.6e-13 80.1 64 71.9
Actinidia20692 Actinidia chinensis HOM05D002696 ORTHO05D003940 2.1e-13 79.7 93 58.1
MBI18_g43604_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 2.7e-13 79.3 59 78.0
arahy.Tifrunner.gnm1.ann1.8HSJ02 Arachis hypogaea HOM05D002696 ORTHO05D011600 3.6e-13 79.0 51 80.4
Aqoxy2G00559 Aquilegia oxysepala HOM05D002696 ORTHO05D003940 4.6e-13 78.6 59 74.6
FvH4_7g27643 Fragaria vesca HOM05D002696 ORTHO05D003940 7.9e-13 77.8 61 77.0
FAN03G1343 Fragaria x ananassa HOM05D002696 ORTHO05D003940 2.3e-12 76.3 62 75.8
arahy.Tifrunner.gnm1.ann1.MK0HFG Arachis hypogaea HOM05D002696 ORTHO05D011600 3.0e-12 75.9 49 79.6
CBR_g40808 Chara braunii HOM05D002696 ORTHO05D003940 3.0e-12 75.9 62 67.7
MBI11_g16498_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 3.0e-12 75.9 99 52.5
MBI13_g39738_MAGBIO Magnolia biondii HOM05D002410 ORTHO05D011600 5.7e-11 71.6 58 77.6
Mapoly0005s0174 Marchantia polymorpha HOM05D002696 ORTHO05D003940 5.7e-11 71.6 61 60.7
AagrBONN_evm.TU.Sc2ySwM_344.3408 Anthoceros agrestis HOM05D002696 ORTHO05D003940 3.1e-09 65.9 60 61.7
Aqoxy7G02845 Aquilegia oxysepala HOM05D002696 ORTHO05D003940 9.1e-09 64.3 62 59.7
FAN06G0900 Fragaria x ananassa HOM05D002696 ORTHO05D003940 5.9e-08 61.6 56 64.3
SMO076G0001 Selaginella moellendorffii HOM05D002696 ORTHO05D003940 5.9e-08 61.6 62 59.7
MCO13G593 Micromonas commoda HOM05D002696 ORTHO05D003940 1.0e-07 60.8 60 60.0
Pp3c13_8840 Physcomitrium patens HOM05D002696 ORTHO05D003940 2.2e-07 59.7 62 58.1
MBI18_g00540_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 2.9e-07 59.3 87 47.1
FAN10G0513 Fragaria x ananassa HOM05D002696 ORTHO05D011600 1.4e-06 57.0 31 93.5
PRCOL_00001774 Prasinoderma coloniale HOM05D002696 ORTHO05D003940 3.2e-06 55.8 62 53.2
arahy.Tifrunner.gnm1.ann1.D9AMXU Arachis hypogaea HOM05D004200 ORTHO05D004996 5.5e-06 55.1 32 87.5
MBI18_g19950_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 5.5e-06 55.1 33 87.9
CSS0036675 Camellia sinensis var. sinensis HOM05D002696 ORTHO05D003940 9.4e-06 54.3 60 58.3
MBI10_g16742_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 9.4e-06 54.3 45 66.7


User provided reference genes

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