Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 0.0e+00 1362.4 690 100.0
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 2.6e-276 955.3 687 72.8
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 1.2e-273 946.4 684 73.2
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 6.8e-269 930.6 641 74.4
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 1.1e-266 923.3 638 74.3
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 3.2e-266 921.8 677 70.6
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 3.4e-260 901.7 695 68.6
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 9.2e-258 893.6 682 67.9
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 4.3e-255 884.8 638 72.9
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 5.6e-255 884.4 650 69.1
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 1.2e-254 883.2 632 71.4
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 8.1e-254 880.6 688 67.9
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 2.4e-253 879.0 678 68.9
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 6.8e-253 877.5 691 66.7
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 2.6e-252 875.5 684 67.7
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 1.4e-250 869.8 687 67.0
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 2.4e-250 869.0 637 69.1
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 5.4e-250 867.8 668 67.8
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 9.2e-250 867.1 666 67.0
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 9.2e-250 867.1 672 67.3
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 1.2e-249 866.7 699 66.0
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 1.2e-249 866.7 700 66.6
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.7e-249 865.5 667 67.0
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 2.7e-249 865.5 665 67.4
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 3.5e-249 865.1 651 68.5
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.3e-248 863.2 637 68.8
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 1.1e-247 860.1 696 66.1
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 4.3e-247 858.2 673 67.0
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 1.6e-246 856.3 648 67.9
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 2.4e-245 852.4 660 68.0
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 3.1e-245 852.0 691 64.7
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.3e-245 851.3 666 65.5
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 1.5e-244 849.7 666 66.1
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 2.0e-244 849.4 657 67.4
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 5.8e-244 847.8 638 69.1
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 6.4e-243 844.3 690 65.7
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 8.4e-243 844.0 660 65.5
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 1.1e-242 843.6 628 67.2
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 3.2e-242 842.0 687 65.4
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 1.6e-241 839.7 632 69.5
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 5.1e-240 834.7 641 67.2
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 6.6e-240 834.3 647 66.3
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 2.5e-239 832.4 658 65.7
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 2.5e-239 832.4 666 66.4
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 7.3e-239 830.9 671 65.1
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.6e-238 829.7 669 64.3
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 6.2e-238 827.8 676 64.2
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 1.4e-237 826.6 676 64.6
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 6.9e-237 824.3 691 63.4
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 2.0e-236 822.8 636 67.8
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 3.4e-236 822.0 660 64.8
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 9.9e-236 820.5 676 64.5
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 2.9e-235 818.9 708 62.6
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 3.8e-235 818.5 673 64.8
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 1.1e-234 817.0 676 64.5
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 2.4e-234 815.8 692 59.7
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 3.5e-233 812.0 669 64.6
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 1.9e-231 806.2 679 62.2
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 2.5e-231 805.8 670 64.0
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 1.6e-230 803.1 644 64.4
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 2.8e-230 802.4 645 65.1
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 1.1e-229 800.4 683 61.5
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 1.4e-229 800.0 638 65.4
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 1.4e-229 800.0 629 65.3
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 4.0e-229 798.5 632 64.9
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 9.0e-229 797.3 638 64.1
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 2.6e-228 795.8 657 63.5
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 3.4e-228 795.4 636 64.9
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 7.6e-228 794.3 656 63.7
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 9.9e-228 793.9 658 63.2
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 1.3e-227 793.5 657 63.3
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 2.2e-227 792.7 658 63.1
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 2.9e-227 792.3 725 60.8
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 6.4e-227 791.2 658 62.9
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 1.1e-226 790.4 640 64.7
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 1.6e-225 786.6 562 72.2
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 1.5e-223 780.0 695 61.6
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 1.6e-222 776.5 643 63.8
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 2.1e-222 776.2 695 61.2
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 3.4e-220 768.8 619 61.7
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 5.5e-218 761.5 769 55.9
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 9.7e-215 750.7 647 59.5
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 3.7e-214 748.8 629 62.8
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 3.1e-213 745.7 691 59.2
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 5.9e-212 741.5 585 62.2
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 5.0e-211 738.4 563 68.6
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 4.2e-210 735.3 566 67.1
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 5.5e-210 734.9 561 63.3
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 4.6e-209 731.9 680 56.8
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 4.5e-204 715.3 821 50.3
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 6.7e-200 701.4 562 61.9
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 8.0e-193 677.9 581 57.7
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 7.7e-188 661.4 605 59.8
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 8.0e-185 651.4 684 53.4
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 1.2e-183 647.5 477 70.0
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 4.5e-164 582.4 782 45.7
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 1.7e-139 500.7 380 66.3
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 3.1e-136 490.0 434 60.6
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 3.2e-133 479.9 431 55.5
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 4.9e-126 456.1 349 69.1
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 3.8e-110 403.3 549 43.2
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 1.5e-103 381.3 555 42.5
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.2e-87 328.6 265 63.4
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.0e-83 315.5 282 59.6
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.0e-83 315.5 282 59.6
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 3.5e-79 300.4 560 35.7
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 6.1e-76 289.7 249 58.2
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 2.3e-75 287.7 242 60.7
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 1.2e-68 265.4 218 62.4
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 8.5e-62 242.7 218 58.7
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 4.9e-49 200.3 573 29.0
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 9.8e-42 176.0 146 65.8
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 9.8e-42 176.0 229 44.5
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 5.6e-37 160.2 123 66.7
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 2.2e-25 121.7 142 48.6
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 2.4e-24 118.2 139 45.3


User provided reference genes

Program Settings