Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 2.8e-280 968.0 494 100.0
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 9.6e-124 448.0 445 54.8
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 8.1e-123 444.9 453 53.4
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 3.4e-121 439.5 455 53.4
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 1.9e-119 433.7 448 53.3
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 3.9e-117 426.0 447 53.0
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 9.6e-116 421.4 458 51.5
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 3.1e-114 416.4 463 51.8
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 9.0e-114 414.8 463 52.1
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 9.3e-111 404.8 455 49.9
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 3.9e-109 399.4 455 49.9
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 4.8e-107 392.5 442 51.4
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 1.1e-106 391.3 444 50.5
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 1.8e-106 390.6 452 48.7
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.8e-106 390.6 336 60.1
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 2.2e-104 383.6 438 49.8
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 2.2e-104 383.6 442 49.3
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 2.2e-104 383.6 448 48.4
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 1.9e-103 380.6 457 48.6
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 5.5e-103 379.0 451 47.5
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 1.8e-101 374.0 466 48.1
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 3.0e-101 373.2 452 46.7
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 3.0e-101 373.2 450 47.6
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 3.3e-100 369.8 439 48.3
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 2.8e-99 366.7 447 47.9
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 2.4e-98 363.6 472 44.7
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 4.1e-98 362.8 455 47.0
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.0e-97 360.5 449 45.4
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 3.4e-97 359.8 445 46.3
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 3.4e-97 359.8 452 45.1
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 3.8e-96 356.3 463 45.6
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 2.5e-95 353.6 461 46.0
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 9.4e-95 351.7 495 44.6
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 1.2e-94 351.3 454 45.2
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 2.7e-94 350.1 454 44.9
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 2.7e-94 350.1 471 44.2
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 3.6e-94 349.7 453 46.8
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.0e-93 348.2 451 43.5
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 3.0e-93 346.7 448 44.9
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 6.7e-93 345.5 461 46.2
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 6.7e-93 345.5 458 46.1
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 6.7e-93 345.5 443 45.1
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 8.8e-93 345.1 466 43.6
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.5e-92 344.4 457 44.4
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 1.5e-92 344.4 438 44.7
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.5e-92 344.4 462 46.3
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 2.0e-92 344.0 428 47.0
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 7.4e-92 342.0 457 44.0
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 1.7e-91 340.9 454 44.1
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 1.7e-91 340.9 451 45.2
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 1.7e-91 340.9 455 43.5
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.2e-91 340.5 443 44.7
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 4.8e-91 339.3 403 47.4
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 6.3e-91 339.0 444 44.8
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 8.2e-91 338.6 468 42.5
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.1e-90 338.2 423 44.4
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 1.1e-90 338.2 438 43.4
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 1.4e-90 337.8 476 42.4
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 3.1e-90 336.7 461 43.6
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 1.2e-89 334.7 436 44.0
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.6e-89 333.6 458 45.6
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 2.6e-89 333.6 439 44.4
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 4.5e-89 332.8 450 43.6
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 3.8e-88 329.7 435 43.2
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 8.5e-88 328.6 453 42.8
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 8.5e-88 328.6 453 42.8
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 4.2e-87 326.2 415 44.1
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 5.5e-87 325.9 448 44.6
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 5.5e-87 325.9 435 44.1
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 2.7e-86 323.6 453 43.0
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 3.6e-86 323.2 443 41.8
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 4.7e-86 322.8 462 41.6
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 5.3e-82 309.3 435 44.6
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 3.5e-81 306.6 436 42.9
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 4.5e-81 306.2 436 43.1
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.0e-80 305.1 454 41.9
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 2.9e-80 303.5 436 42.9
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 8.5e-80 302.0 452 43.1
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 8.5e-80 302.0 435 42.8
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 8.5e-80 302.0 437 42.6
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.4e-79 301.2 447 42.3
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 1.9e-79 300.8 440 43.2
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.9e-79 300.8 454 42.5
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 3.6e-78 296.6 446 41.9
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 8.0e-78 295.4 460 40.7
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 5.2e-77 292.7 458 40.6
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 9.7e-76 288.5 455 41.1
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 9.7e-76 288.5 412 42.5
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 2.2e-75 287.3 472 40.0
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 1.4e-74 284.6 299 52.2
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 1.6e-73 281.2 392 42.1
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 2.6e-73 280.4 348 48.0
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.7e-72 277.7 443 39.1
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 1.1e-71 275.0 343 45.8
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.8e-66 257.7 326 46.9
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 8.8e-61 238.8 277 46.9
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 3.1e-58 230.3 432 35.0
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 1.1e-55 221.9 303 44.2
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 1.9e-39 167.9 182 49.5
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 1.7e-32 144.8 231 42.0
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 1.7e-32 144.8 348 32.5
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 6.6e-32 142.9 184 42.4
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.1e-30 137.9 153 48.4
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 8.1e-30 136.0 489 27.6
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.8e-29 134.8 153 47.7
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.8e-29 134.8 153 47.7
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.3e-24 117.9 253 33.6
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 2.5e-23 114.4 89 68.5
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 7.3e-23 112.8 119 47.9
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-22 112.1 128 50.8
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 1.1e-21 109.0 437 27.0
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 2.0e-20 104.8 165 34.5
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 2.0e-20 104.8 165 34.5
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 5.8e-20 103.2 193 36.8
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 1.1e-18 99.0 142 40.8
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 7.8e-17 92.8 438 23.5
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 2.8e-14 84.3 85 52.9
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.1e-13 82.4 94 47.9
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 2.0e-12 78.2 75 49.3
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 7.1e-10 69.7 54 59.3
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.1e-09 68.2 113 33.6
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 3.9e-08 63.9 96 37.5
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 6.6e-08 63.2 72 52.8
arahy.Tifrunner.gnm1.ann1.SUI2IU Arachis hypogaea HOM05D006143 ORTHO05D007587 3.3e-07 60.8 56 50.0


User provided reference genes

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