Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g43576_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 2.1e-172 609.0 317 100.0
MBI06_g38706_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 5.9e-135 484.6 315 83.8
MBI19_g39580_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012304 1.2e-90 337.4 290 66.9
TAR626G0081 Trochodendron aralioides HOM05D000228 ORTHO05D004880 6.4e-81 305.1 349 50.1
Dinv22035 Davidia involucrata HOM05D000228 ORTHO05D004880 1.3e-76 290.8 244 63.1
Aqoxy7G04198 Aquilegia oxysepala HOM05D000228 ORTHO05D004880 2.1e-76 290.0 245 61.2
Hma1.2p1_1202F.1_g266790 Hydrangea macrophylla HOM05D000228 ORTHO05D004880 2.8e-76 289.7 244 62.3
Aqoxy6G01013 Aquilegia oxysepala HOM05D000228 ORTHO05D004880 2.4e-75 286.6 255 59.6
PSO782G2240 Papaver somniferum HOM05D000228 ORTHO05D004880 9.0e-75 284.6 339 49.0
PSO063G0693 Papaver somniferum HOM05D000228 ORTHO05D004880 1.3e-73 280.8 339 48.7
GSVIVG01013491001 Vitis vinifera HOM05D000228 ORTHO05D004880 2.5e-72 276.6 245 57.6
Haze_03043 Corylus avellana HOM05D000228 ORTHO05D004880 1.2e-71 274.2 241 56.8
Atru.chr12.1341 Acer truncatum HOM05D000228 ORTHO05D004880 7.9e-71 271.6 245 56.7
CiPaw.13G013500 Carya illinoinensis HOM05D000228 ORTHO05D004880 3.0e-70 269.6 255 56.5
vmacro12694 Vaccinium macrocarpon HOM05D000228 ORTHO05D004880 3.3e-69 266.2 270 52.6
Thecc.10G157200 Theobroma cacao HOM05D000228 ORTHO05D004880 1.6e-68 263.8 255 52.5
CSS0032728 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D004880 4.8e-68 262.3 337 46.6
Nn6g31494 Nelumbo nucifera HOM05D000228 ORTHO05D004880 6.3e-68 261.9 245 55.9
Actinidia21520 Actinidia chinensis HOM05D000228 ORTHO05D004880 8.2e-68 261.5 245 55.9
Duzib114G0608 Durio zibethinus HOM05D000228 ORTHO05D004880 1.1e-67 261.2 256 51.2
Gohir.A06G175400 Gossypium hirsutum HOM05D000228 ORTHO05D004880 6.9e-67 258.5 256 50.8
Gohir.D06G185200 Gossypium hirsutum HOM05D000228 ORTHO05D004880 9.0e-67 258.1 256 50.8
Eucgr.J01182 Eucalyptus grandis HOM05D000228 ORTHO05D004880 1.2e-66 257.7 244 53.3
Gorai.010G216600 Gossypium raimondii HOM05D000228 ORTHO05D004880 1.2e-66 257.7 256 50.8
Manes.04G159600 Manihot esculenta HOM05D000228 ORTHO05D004880 1.5e-66 257.3 244 53.7
FAN01G1291 Fragaria x ananassa HOM05D000228 ORTHO05D004880 4.5e-66 255.8 276 51.1
ClCG01G007520 Citrullus lanatus HOM05D000228 ORTHO05D004880 1.7e-65 253.8 245 53.5
FvH4_7g03040 Fragaria vesca HOM05D000228 ORTHO05D004880 3.8e-65 252.7 276 50.7
Potri.001G027232 Populus trichocarpa HOM05D000228 ORTHO05D004880 5.0e-65 252.3 244 54.1
COL.COLO4_20753 Corchorus olitorius HOM05D000228 ORTHO05D004880 6.5e-65 251.9 256 50.0
MD07G1039700 Malus domestica HOM05D000228 ORTHO05D004880 6.5e-65 251.9 245 53.9
FAN06G4504 Fragaria x ananassa HOM05D000228 ORTHO05D004880 8.5e-65 251.5 276 50.4
FAN03G2523 Fragaria x ananassa HOM05D000228 ORTHO05D004880 1.4e-64 250.8 276 50.4
Sed0021971 Sechium edule HOM05D000228 ORTHO05D004880 2.5e-64 250.0 245 53.1
Sabra03G0146600 Salix brachista HOM05D000228 ORTHO05D004880 3.2e-64 249.6 245 53.9
Hund27778 Selenicereus undatus HOM05D000228 ORTHO05D004880 5.5e-64 248.8 255 53.3
Hund27781 Selenicereus undatus HOM05D000228 ORTHO05D004880 5.5e-64 248.8 255 53.3
CsaV3_5G024490 Cucumis sativus L. HOM05D000228 ORTHO05D004880 7.2e-64 248.4 245 52.7
Cc02_g30260 Coffea canephora HOM05D000228 ORTHO05D004880 9.3e-64 248.1 245 50.6
RcHm_v2.0_Chr1g0324091 Rosa chinensis HOM05D000228 ORTHO05D004880 1.2e-63 247.7 276 49.6
MELO3C005153.2 Cucumis melo HOM05D000228 ORTHO05D004880 1.6e-63 247.3 245 52.2
Sc11g0006440 Simmondsia chinensis HOM05D000228 ORTHO05D004880 1.6e-63 247.3 301 47.8
Lj7A585G29 Lonicera japonica HOM05D000228 ORTHO05D004880 3.6e-63 246.1 245 52.2
Potri.003G196900 Populus trichocarpa HOM05D000228 ORTHO05D004880 3.6e-63 246.1 244 53.3
FAN10G2682 Fragaria x ananassa HOM05D000228 ORTHO05D004880 7.9e-63 245.0 276 50.0
MD02G1287600 Malus domestica HOM05D000228 ORTHO05D004880 7.9e-63 245.0 245 52.7
Sed0005526 Sechium edule HOM05D000228 ORTHO05D004880 8.7e-62 241.5 245 51.0
Prupe.2G035500 Prunus persica HOM05D000228 ORTHO05D004880 3.3e-61 239.6 245 51.8
Ciclev10004129m.g Citrus clementina HOM05D000228 ORTHO05D004880 1.3e-60 237.7 245 52.2
CANSAT56G3974 Cannabis sativa HOM05D000228 ORTHO05D004880 3.7e-60 236.1 337 43.6
Ah.10g030570 Amaranthus hybridus HOM05D000228 ORTHO05D004880 1.1e-59 234.6 255 49.4
Ah.10g030560 Amaranthus hybridus HOM05D000228 ORTHO05D004880 2.4e-59 233.4 255 49.4
CAN.G1045.38 Capsicum annuum HOM05D000228 ORTHO05D004880 5.3e-59 232.3 245 49.8
HPP92_010995 Vanilla planifolia HOM05D000228 ORTHO05D004880 1.2e-58 231.1 339 41.0
EL10Ac2g02803 Beta vulgaris HOM05D000228 ORTHO05D004880 4.5e-58 229.2 255 49.8
Lsat_1_v5_gn_7_31901 Lactuca sativa HOM05D006097 ORTHO05D004880 5.9e-58 228.8 245 44.5
CDE02G4035 Ceratophyllum demersum HOM05D000228 ORTHO05D004880 1.7e-57 227.3 307 43.3
AUR62026863 Chenopodium quinoa HOM05D000228 ORTHO05D004880 1.7e-57 227.3 265 47.2
AUR62032652 Chenopodium quinoa HOM05D000228 ORTHO05D004880 3.8e-57 226.1 265 46.8
DCAR_022342 Daucus carota HOM05D000228 ORTHO05D004880 3.8e-57 226.1 241 47.3
Solyc01g096390.4 Solanum lycopersicum HOM05D000228 ORTHO05D004880 5.0e-57 225.7 245 49.0
Sopen01g040120 Solanum pennellii HOM05D000228 ORTHO05D004880 5.0e-57 225.7 245 49.0
ECA236G0597 Erigeron canadensis HOM05D000228 ORTHO05D004880 1.4e-56 224.2 276 43.1
SalBow5G3376 Salvia bowleyana HOM05D000228 ORTHO05D004880 1.4e-56 224.2 245 51.0
SGA_v2.0_scaffold124G33613 Striga asiatica HOM05D000228 ORTHO05D004880 1.4e-56 224.2 260 48.8
Migut.B01227 Erythranthe guttata HOM05D000228 ORTHO05D004880 1.9e-56 223.8 246 50.0
HanXRQChr15g0481481 Helianthus annuus HOM05D000228 ORTHO05D004880 3.2e-56 223.0 286 40.2
Oeu038177.1 Olea europaea HOM05D000228 ORTHO05D004880 4.2e-56 222.6 246 50.0
SalBow5G5050 Salvia bowleyana HOM05D000228 ORTHO05D004880 4.2e-56 222.6 245 50.6
HanXRQChr01g0022531 Helianthus annuus HOM05D000228 ORTHO05D004880 9.4e-56 221.5 286 40.9
Lalb_Chr03g0032731 Lupinus albus HOM05D000228 ORTHO05D004880 1.2e-55 221.1 246 47.2
Glyma.15G235900 Glycine max HOM05D000228 ORTHO05D004880 1.6e-55 220.7 244 48.4
Lalb_Chr01g0007761 Lupinus albus HOM05D000228 ORTHO05D004880 1.6e-55 220.7 246 46.3
Peaxi162Scf00767g00417 Petunia axillaris HOM05D000228 ORTHO05D004880 2.7e-55 219.9 244 48.0
Glyma.13G196900 Glycine max HOM05D000228 ORTHO05D004880 7.9e-55 218.4 244 48.4
arahy.Tifrunner.gnm1.ann1.50BPU8 Arachis hypogaea HOM05D000228 ORTHO05D004880 1.4e-54 217.6 244 45.9
Ca_23957_v3 Cicer arietinum L. HOM05D000228 ORTHO05D004880 8.8e-54 214.9 244 47.5
Ca_30885_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 8.8e-54 214.9 244 47.5
VMungo1127G1028 Vigna mungo HOM05D000228 ORTHO05D004880 1.1e-53 214.5 244 45.9
Medtr8g038990 Medicago truncatula HOM05D000228 ORTHO05D004880 1.5e-53 214.2 244 46.7
arahy.Tifrunner.gnm1.ann1.K566NY Arachis hypogaea HOM05D000228 ORTHO05D004880 2.6e-53 213.4 244 45.1
Cpa.g.sc271.2 Carica papaya HOM05D000228 ORTHO05D004880 3.7e-52 209.5 244 50.4
Phvul.011G206900 Phaseolus vulgaris HOM05D000228 ORTHO05D004880 4.8e-52 209.1 244 45.9
PGR044G0122 Punica granatum HOM05D000228 ORTHO05D004880 8.2e-52 208.4 252 45.6
Psat4g144400 Pisum sativum HOM05D000228 ORTHO05D004880 1.4e-51 207.6 244 45.9
Zm00001eb207920 Zea mays HOM05D000228 ORTHO05D004880 2.0e-50 203.8 255 44.3
Lj3g0014961 Lotus japonicus HOM05D000228 ORTHO05D004880 4.5e-50 202.6 244 44.7
Lj3g0006268 Lotus japonicus HOM05D000228 ORTHO05D004880 5.5e-48 195.7 244 44.3
unitig_0.g1386 Utricularia gibba HOM05D000228 ORTHO05D004880 1.7e-44 184.1 229 42.4
MBI17_g42027_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004199 6.3e-44 182.2 117 83.8
Aa31LG5G19570 Aethionema arabicum HOM05D000228 ORTHO05D004880 3.1e-43 179.9 245 45.3
AL4G37670 Arabidopsis lyrata HOM05D000228 ORTHO05D004880 7.0e-43 178.7 245 44.5
THA.LOC104809820 Tarenaya hassleriana HOM05D000228 ORTHO05D004880 9.1e-43 178.3 244 44.7
Carub.0004s2219 Capsella rubella HOM05D000228 ORTHO05D004880 2.0e-42 177.2 245 44.1
AT2G40030 Arabidopsis thaliana HOM05D000228 ORTHO05D004880 3.5e-42 176.4 245 44.1
Lj4P514T6 Lonicera japonica HOM05D000228 ORTHO05D004880 3.5e-42 176.4 209 45.9
TPR.G25078 Trifolium pratense HOM05D000228 ORTHO05D004880 1.3e-41 174.5 198 45.5
CARHR134990 Cardamine hirsuta HOM05D000228 ORTHO05D004880 2.2e-41 173.7 274 41.6
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 3.2e-40 169.9 92 96.7
Sp4g22340 Schrenkiella parvula HOM05D000228 ORTHO05D004880 2.7e-39 166.8 245 42.0
Thhalv10016128m.g Eutrema salsugineum HOM05D000228 ORTHO05D004880 4.7e-39 166.0 274 39.8
BolC3t15049H Brassica oleracea HOM05D000228 ORTHO05D004880 2.3e-38 163.7 245 41.2
BcaC01g05442 Brassica carinata HOM05D000228 ORTHO05D004880 3.0e-38 163.3 245 41.2
A03p22490 Brassica napus HOM05D000228 ORTHO05D004880 3.0e-38 163.3 245 41.2
BraA03t11476Z Brassica rapa HOM05D000228 ORTHO05D004880 3.0e-38 163.3 245 41.2
C03p26640 Brassica napus HOM05D000228 ORTHO05D004880 1.5e-37 161.0 245 40.8
BcaB01g03594 Brassica carinata HOM05D000228 ORTHO05D004880 2.6e-37 160.2 245 41.2
BcaB02g09059 Brassica carinata HOM05D000228 ORTHO05D004880 6.3e-36 155.6 272 38.6
Rhsim01G0124000 Rhododendron simsii HOM05D000228 ORTHO05D004880 6.5e-33 145.6 343 33.2
MBI09_g32567_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 1.1e-32 144.8 80 90.0
TWI15G0020 Tripterygium wilfordii HOM05D000228 ORTHO05D004880 2.5e-32 143.7 270 35.2
MBI12_g41338_MAGBIO Magnolia biondii HOM05D000887 ORTHO05D012304 9.4e-32 141.7 177 54.2
MBI15_g40394_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D010488 9.4e-32 141.7 82 91.5
TWI38G1715 Tripterygium wilfordii HOM05D000228 ORTHO05D004880 1.4e-27 127.9 245 34.7
SEGI_18016 Sequoiadendron giganteum HOM05D000228 ORTHO05D004880 2.7e-26 123.6 280 32.1
MBI06_g41726_MAGBIO Magnolia biondii HOM05D002407 ORTHO05D002476 2.5e-24 117.1 167 47.3
MBI15_g05486_MAGBIO Magnolia biondii HOM05D002407 ORTHO05D002476 5.5e-24 115.9 167 47.3
BcaC01g05443 Brassica carinata HOM05D000228 ORTHO05D004880 1.1e-19 101.7 149 43.0
TPR.G27818 Trifolium pratense HOM05D000228 ORTHO05D004880 2.7e-18 97.1 207 33.8
Os01g0965000 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D004880 8.6e-17 92.0 238 31.5
MBI15_g20025_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 1.2e-15 88.2 58 74.1
Lj3C124T2 Lonicera japonica HOM05D000228 ORTHO05D004880 3.6e-15 86.7 91 52.7
SEGI_22706 Sequoiadendron giganteum HOM05D000228 ORTHO05D004880 5.2e-14 82.8 258 31.0
Zm00001eb119350 Zea mays HOM05D000228 ORTHO05D004880 4.4e-13 79.7 173 33.5
AagrBONN_evm.TU.Sc2ySwM_344.2431 Anthoceros agrestis HOM05D000228 ORTHO05D006129 4.6e-10 69.7 294 24.8
Lj5P411T2 Lonicera japonica HOM05D000228 ORTHO05D036479 7.8e-10 68.9 86 39.5
SEGI_40451 Sequoiadendron giganteum HOM05D000228 ORTHO05D004880 1.7e-09 67.8 214 29.4
AagrBONN_evm.TU.Sc2ySwM_362.2559 Anthoceros agrestis HOM05D000228 ORTHO05D004880 9.5e-08 62.0 153 30.1
MBI19_g40205_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 2.8e-07 60.5 116 37.9
Mapoly0006s0043 Marchantia polymorpha HOM05D000228 ORTHO05D006129 6.2e-07 59.3 124 33.1
MBI15_g01161_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 1.4e-06 58.2 32 84.4


User provided reference genes

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