Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g22031_MAGBIO Magnolia biondii HOM05D004190 ORTHO05D004692 6.2e-184 647.5 371 100.0
ATR0559G266 Amborella trichopoda HOM05D004190 ORTHO05D004692 8.4e-40 168.7 211 46.9
CDE02G2475 Ceratophyllum demersum HOM05D004190 ORTHO05D004692 1.1e-36 158.3 200 45.5
TAR623G1294 Trochodendron aralioides HOM05D004190 ORTHO05D004692 1.4e-34 151.4 181 49.2
Nn2g13344 Nelumbo nucifera HOM05D004190 ORTHO05D004692 2.9e-32 143.7 333 35.4
Eucgr.J02050 Eucalyptus grandis HOM05D004190 ORTHO05D004692 1.4e-31 141.4 187 45.5
CiPaw.13G093900 Carya illinoinensis HOM05D004190 ORTHO05D004692 5.7e-28 129.4 191 40.8
Gohir.A13G227300 Gossypium hirsutum HOM05D004190 ORTHO05D004692 2.8e-27 127.1 233 36.9
CsaV3_1G034280 Cucumis sativus L. HOM05D004190 ORTHO05D004692 4.8e-27 126.3 165 44.8
ClCG03G001470 Citrullus lanatus HOM05D004190 ORTHO05D004692 1.4e-26 124.8 187 41.2
CiPaw.04G135700 Carya illinoinensis HOM05D004190 ORTHO05D004692 9.1e-26 122.1 190 37.9
Sc21g0005810 Simmondsia chinensis HOM05D004190 ORTHO05D004692 1.2e-25 121.7 167 44.3
FvH4_3g36180 Fragaria vesca HOM05D004190 ORTHO05D004692 2.6e-25 120.6 165 41.2
Thecc.09G321100 Theobroma cacao HOM05D004190 ORTHO05D004692 2.6e-25 120.6 174 42.0
FAN25G3130 Fragaria x ananassa HOM05D004190 ORTHO05D004692 3.4e-25 120.2 216 37.5
SEGI_09707 Sequoiadendron giganteum HOM05D004190 ORTHO05D004692 3.4e-25 120.2 166 45.8
Sed0024869 Sechium edule HOM05D004190 ORTHO05D004692 5.9e-25 119.4 178 40.4
Sc24g0002450 Simmondsia chinensis HOM05D004190 ORTHO05D004692 5.9e-25 119.4 211 38.4
FAN21G2646 Fragaria x ananassa HOM05D004190 ORTHO05D004692 1.0e-24 118.6 165 40.0
RcHm_v2.0_Chr5g0064931 Rosa chinensis HOM05D004190 ORTHO05D004692 1.0e-24 118.6 213 37.6
Gorai.013G263700 Gossypium raimondii HOM05D004190 ORTHO05D004692 1.3e-24 118.2 233 35.2
Sed0018693 Sechium edule HOM05D004190 ORTHO05D004692 1.7e-24 117.9 165 43.6
FAN16G2398 Fragaria x ananassa HOM05D004190 ORTHO05D004692 2.2e-24 117.5 215 39.5
COL.COLO4_18512 Corchorus olitorius HOM05D004190 ORTHO05D004692 2.9e-24 117.1 225 36.9
Duzib170G0106 Durio zibethinus HOM05D004190 ORTHO05D004692 2.9e-24 117.1 224 37.1
FAN11G2049 Fragaria x ananassa HOM05D004190 ORTHO05D004692 2.9e-24 117.1 165 40.0
PGR119G1862 Punica granatum HOM05D004190 ORTHO05D004692 3.8e-24 116.7 217 37.3
CANSAT54G1895 Cannabis sativa HOM05D004190 ORTHO05D004692 6.5e-24 115.9 163 41.1
Gohir.D13G232900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 1.1e-23 115.2 233 34.8
MD03G1092700 Malus domestica HOM05D004190 ORTHO05D004692 1.9e-23 114.4 188 38.8
EL10Ac7g16022 Beta vulgaris HOM05D004190 ORTHO05D004692 2.5e-23 114.0 163 39.9
Duzib150G1353 Durio zibethinus HOM05D004190 ORTHO05D004692 4.2e-23 113.2 200 38.5
Hund04953 Selenicereus undatus HOM05D004190 ORTHO05D004692 4.2e-23 113.2 225 35.6
Prupe.6G076700 Prunus persica HOM05D004190 ORTHO05D004692 7.2e-23 112.5 163 42.3
Cpa.g.sc81.141 Carica papaya HOM05D004190 ORTHO05D004692 1.6e-22 111.3 186 37.6
Manes.01G173632 Manihot esculenta HOM05D004190 ORTHO05D004692 4.6e-22 109.8 157 38.2
GSVIVG01024954001 Vitis vinifera HOM05D004190 ORTHO05D004692 4.6e-22 109.8 161 37.9
Gohir.D05G095900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 6.1e-22 109.4 189 37.0
Gorai.009G099200 Gossypium raimondii HOM05D004190 ORTHO05D004692 7.9e-22 109.0 189 37.0
Potri.009G031100 Populus trichocarpa HOM05D004190 ORTHO05D004692 1.0e-21 108.6 213 35.7
Ah.08g219540 Amaranthus hybridus HOM05D004190 ORTHO05D004692 1.8e-21 107.8 197 37.1
Atru.chr3.3912 Acer truncatum HOM05D004190 ORTHO05D004692 2.3e-21 107.5 160 40.0
TWI31G0561 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 3.0e-21 107.1 170 38.8
Gohir.A05G095600 Gossypium hirsutum HOM05D004190 ORTHO05D004692 5.1e-21 106.3 189 36.5
CARHR285750 Cardamine hirsuta HOM05D004190 ORTHO05D004692 1.1e-20 105.1 167 37.1
Hund18906 Selenicereus undatus HOM05D004190 ORTHO05D004692 1.1e-20 105.1 208 33.2
Actinidia07264 Actinidia chinensis HOM05D004190 ORTHO05D004692 1.5e-20 104.8 201 32.3
Thhalv10014530m.g Eutrema salsugineum HOM05D004190 ORTHO05D004692 2.6e-20 104.0 201 31.8
MD11G1107500 Malus domestica HOM05D004190 ORTHO05D004692 2.6e-20 104.0 165 38.2
Ciclev10029152m.g Citrus clementina HOM05D004190 ORTHO05D004692 4.4e-20 103.2 174 37.9
THA.LOC104814877 Tarenaya hassleriana HOM05D004190 ORTHO05D004692 4.4e-20 103.2 229 31.4
CDE08G1317 Ceratophyllum demersum HOM05D004190 ORTHO05D004692 7.4e-20 102.4 155 43.9
TWI79G1380 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 7.4e-20 102.4 169 39.6
BraA10t43742Z Brassica rapa HOM05D000173 ORTHO05D000316 1.7e-19 101.3 162 37.7
Ah.15g097420 Amaranthus hybridus HOM05D004190 ORTHO05D004692 2.2e-19 100.9 220 33.6
BcaC04g19780 Brassica carinata HOM05D004190 ORTHO05D004692 4.8e-19 99.8 163 37.4
C09p51780 Brassica napus HOM05D000173 ORTHO05D004692 4.8e-19 99.8 163 37.4
BolC9t58040H Brassica oleracea HOM05D000173 ORTHO05D004692 4.8e-19 99.8 163 37.4
BraA02t05794Z Brassica rapa HOM05D004190 ORTHO05D004692 1.1e-18 98.6 161 36.0
Sp6g21060 Schrenkiella parvula HOM05D004190 ORTHO05D004692 1.1e-18 98.6 171 35.1
Oeu048854.1 Olea europaea HOM05D004190 ORTHO05D004692 1.8e-18 97.8 171 34.5
AT5G59380 Arabidopsis thaliana HOM05D004190 ORTHO05D004692 5.3e-18 96.3 162 36.4
BcaC03g14013 Brassica carinata HOM05D004190 ORTHO05D004692 5.3e-18 96.3 187 35.3
BolC2t07349H Brassica oleracea HOM05D004190 ORTHO05D004692 5.3e-18 96.3 187 35.3
Nitab4.5_0003516g0050 Nicotiana tabacum HOM05D004190 ORTHO05D004692 6.9e-18 95.9 179 35.8
Carub.0005s1285 Capsella rubella HOM05D004190 ORTHO05D004692 9.1e-18 95.5 187 33.2
Aa31sc23G430 Aethionema arabicum HOM05D004190 ORTHO05D004692 1.5e-17 94.7 181 35.4
AL5G25450 Arabidopsis lyrata HOM05D004190 ORTHO05D004692 1.5e-17 94.7 162 32.7
BcaC01g06528 Brassica carinata HOM05D004190 ORTHO05D004692 1.5e-17 94.7 155 37.4
Haze_24100 Corylus avellana HOM05D004190 ORTHO05D004692 1.5e-17 94.7 258 30.2
AT3G46580 Arabidopsis thaliana HOM05D004190 ORTHO05D004692 2.0e-17 94.4 193 31.6
Dinv22804 Davidia involucrata HOM05D004190 ORTHO05D004692 2.0e-17 94.4 190 35.3
Thhalv10002683m.g Eutrema salsugineum HOM05D004190 ORTHO05D004692 2.0e-17 94.4 170 34.7
Solyc11g068740.2 Solanum lycopersicum HOM05D004190 ORTHO05D004692 2.0e-17 94.4 228 33.3
Sopen11g027450 Solanum pennellii HOM05D004190 ORTHO05D004692 2.6e-17 94.0 215 34.4
C02p12490 Brassica napus HOM05D000173 ORTHO05D000316 3.4e-17 93.6 187 34.8
Dinv08914 Davidia involucrata HOM05D004190 ORTHO05D004692 5.9e-17 92.8 156 37.2
AUR62001782 Chenopodium quinoa HOM05D004190 ORTHO05D004692 7.7e-17 92.4 214 31.8
BraA03t10485Z Brassica rapa HOM05D004190 ORTHO05D004692 1.0e-16 92.0 191 34.6
Carub.0008s2005 Capsella rubella HOM05D004190 ORTHO05D004692 1.0e-16 92.0 162 35.8
Nitab4.5_0001135g0020 Nicotiana tabacum HOM05D004190 ORTHO05D004692 1.0e-16 92.0 179 35.8
Peaxi162Scf00224g00513 Petunia axillaris HOM05D004190 ORTHO05D004692 1.0e-16 92.0 173 35.3
PGSC0003DMG400026344 Solanum tuberosum HOM05D004190 ORTHO05D004692 1.0e-16 92.0 167 38.3
HanXRQChr03g0089211 Helianthus annuus HOM05D004190 ORTHO05D004692 1.3e-16 91.7 209 34.9
Aa31LG4G15580 Aethionema arabicum HOM05D004190 ORTHO05D004692 1.7e-16 91.3 166 33.1
Aqoxy4G02933 Aquilegia oxysepala HOM05D004190 ORTHO05D004692 2.2e-16 90.9 173 35.3
BcaB05g22507 Brassica carinata HOM05D004190 ORTHO05D004692 2.2e-16 90.9 207 32.4
BolC3t13827H Brassica oleracea HOM05D004190 ORTHO05D004692 2.9e-16 90.5 155 38.1
AL8G35820 Arabidopsis lyrata HOM05D004190 ORTHO05D004692 3.8e-16 90.1 187 32.1
THA.LOC104810778 Tarenaya hassleriana HOM05D004190 ORTHO05D004692 6.5e-16 89.4 203 33.0
Cc01_g08740 Coffea canephora HOM05D004190 ORTHO05D004692 8.5e-16 89.0 165 38.8
BcaC09g49754 Brassica carinata HOM05D004190 ORTHO05D004692 1.1e-15 88.6 172 36.0
Sabra09G0021900 Salix brachista HOM05D004190 ORTHO05D004692 1.1e-15 88.6 214 29.9
SEGI_27640 Sequoiadendron giganteum HOM05D027190 ORTHO05D004692 1.1e-15 88.6 161 36.0
BcaB01g04590 Brassica carinata HOM05D004190 ORTHO05D004692 1.4e-15 88.2 180 33.9
C01p33300 Brassica napus HOM05D004190 ORTHO05D004692 1.4e-15 88.2 183 34.4
BolC1t03263H Brassica oleracea HOM05D004190 ORTHO05D004692 1.4e-15 88.2 183 34.4
BraA01t02543Z Brassica rapa HOM05D004190 ORTHO05D004692 1.4e-15 88.2 183 34.4
Sp5g15120 Schrenkiella parvula HOM05D004190 ORTHO05D004692 1.9e-15 87.8 163 35.0
AUR62009570 Chenopodium quinoa HOM05D004190 ORTHO05D004692 3.2e-15 87.0 214 30.4
C03p13790 Brassica napus HOM05D004190 ORTHO05D004692 4.2e-15 86.7 156 37.2
BcaB01g04586 Brassica carinata HOM05D004190 ORTHO05D004692 5.5e-15 86.3 187 32.6
Rhsim13G0195100 Rhododendron simsii HOM05D004190 ORTHO05D004692 7.2e-15 85.9 266 27.8
SEGI_27595 Sequoiadendron giganteum HOM05D027190 ORTHO05D004692 9.4e-15 85.5 158 33.5
Cfa011508 Carpinus fangiana HOM05D004190 ORTHO05D004692 1.2e-14 85.1 110 48.2
CAN.G745.23 Capsicum annuum HOM05D004190 ORTHO05D004692 1.6e-14 84.7 251 29.9
SHI05942 Sapria himalayana HOM05D004190 ORTHO05D004692 2.7e-14 84.0 221 30.3
BcaB08g36263 Brassica carinata HOM05D004190 ORTHO05D004692 3.6e-14 83.6 163 35.0
SEGI_38205 Sequoiadendron giganteum HOM05D027190 ORTHO05D004692 7.9e-14 82.4 153 37.3
Lsat_1_v5_gn_3_111560 Lactuca sativa HOM05D004190 ORTHO05D004692 3.0e-13 80.5 247 30.0
PGSC0003DMG400024773 Solanum tuberosum HOM05D004190 ORTHO05D004692 3.0e-13 80.5 170 31.2
Potri.001G240100 Populus trichocarpa HOM05D004190 ORTHO05D004692 3.9e-13 80.1 79 55.7
SEGI_35246 Sequoiadendron giganteum HOM05D004190 ORTHO05D004692 6.7e-13 79.3 94 47.9
BcaB05g23553 Brassica carinata HOM05D004190 ORTHO05D004692 8.8e-13 79.0 159 31.4
QL01p031797 Quercus lobata HOM05D004190 ORTHO05D004692 8.8e-13 79.0 272 26.5
CAN.G1733.5 Capsicum annuum HOM05D004190 ORTHO05D004692 2.0e-12 77.8 194 32.5
Hma1.2p1_0220F.1_g093040 Hydrangea macrophylla HOM05D004190 ORTHO05D004692 3.7e-11 73.6 135 37.0
Hma1.2p1_1227F.1_g268580 Hydrangea macrophylla HOM05D004190 ORTHO05D004692 3.7e-11 73.6 135 37.0
SEGI_04263 Sequoiadendron giganteum HOM05D016141 ORTHO05D004692 6.3e-11 72.8 50 60.0
HanXRQChr13g0419771 Helianthus annuus HOM05D004190 ORTHO05D004692 3.1e-10 70.5 161 32.3
Haze_12048 Corylus avellana HOM05D004190 ORTHO05D004692 4.1e-10 70.1 332 24.1
CSS0021452 Camellia sinensis var. sinensis HOM05D004190 ORTHO05D004692 5.3e-10 69.7 137 34.3
CARHR155230 Cardamine hirsuta HOM05D004190 ORTHO05D004692 9.1e-10 68.9 187 27.3
SalBow3G0001 Salvia bowleyana HOM05D004190 ORTHO05D004692 9.1e-10 68.9 99 39.4
ECA240G3776 Erigeron canadensis HOM05D004190 ORTHO05D000203 1.2e-09 68.6 216 30.6
TAR629G1002 Trochodendron aralioides HOM05D003520 ORTHO05D003332 2.0e-09 67.8 96 43.8
CAN.G745.26 Capsicum annuum HOM05D004190 ORTHO05D004692 2.6e-09 67.4 298 25.8
Duzib093G1405 Durio zibethinus HOM05D006496 ORTHO05D004692 3.5e-09 67.0 154 31.8
FvH4_6g13651 Fragaria vesca HOM05D022761 ORTHO05D022494 5.9e-09 66.2 170 27.6
FAN09G4791 Fragaria x ananassa HOM05D004190 ORTHO05D022494 7.7e-09 65.9 170 27.6
FAN14G3185 Fragaria x ananassa HOM05D022761 ORTHO05D022494 7.7e-09 65.9 170 27.6
MBI18_g01149_MAGBIO Magnolia biondii HOM05D003520 ORTHO05D003332 7.7e-09 65.9 59 47.5
TWI31G1174 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 7.7e-09 65.9 87 46.0
Cfa012135 Carpinus fangiana HOM05D003520 ORTHO05D003332 1.0e-08 65.5 108 40.7
PGSC0003DMG400006228 Solanum tuberosum HOM05D004190 ORTHO05D004692 1.7e-08 64.7 128 34.4
Aqoxy4G00226 Aquilegia oxysepala HOM05D004190 ORTHO05D004692 3.8e-08 63.5 85 37.6
Aqoxy7G00385 Aquilegia oxysepala HOM05D003520 ORTHO05D003332 5.0e-08 63.2 202 31.2
CAN.G1733.1 Capsicum annuum HOM05D004190 ORTHO05D004692 5.0e-08 63.2 249 25.3
Thecc.03G274800 Theobroma cacao HOM05D003520 ORTHO05D003332 5.0e-08 63.2 89 42.7
CiPaw.11G138700 Carya illinoinensis HOM05D003520 ORTHO05D003332 6.5e-08 62.8 72 47.2
DCAR_002216 Daucus carota HOM05D002742 ORTHO05D002959 6.5e-08 62.8 139 32.4
Mapoly0026s0046 Marchantia polymorpha HOM05D004190 ORTHO05D004692 6.5e-08 62.8 124 36.3
unitig_8.g3659 Utricularia gibba HOM05D004190 ORTHO05D004692 6.5e-08 62.8 67 49.3
ATR0680G240 Amborella trichopoda HOM05D003520 ORTHO05D003332 1.5e-07 61.6 160 30.0
PGSC0003DMG400014327 Solanum tuberosum HOM05D012625 ORTHO05D003332 1.9e-07 61.2 78 42.3
CAN.G1733.2 Capsicum annuum HOM05D004190 ORTHO05D004692 3.2e-07 60.5 227 27.8
Duzib084G0866 Durio zibethinus HOM05D003520 ORTHO05D003332 4.2e-07 60.1 108 37.0
Migut.N02470 Erythranthe guttata HOM05D004190 ORTHO05D004692 5.5e-07 59.7 100 40.0
Nitab4.5_0000716g0220 Nicotiana tabacum HOM05D012625 ORTHO05D003332 5.5e-07 59.7 97 41.2
Solyc03g025970.3 Solanum lycopersicum HOM05D012625 ORTHO05D003332 5.5e-07 59.7 79 40.5
TWI81G1024 Tripterygium wilfordii HOM05D003520 ORTHO05D003332 5.5e-07 59.7 72 38.9
MSTRG.17696 Avicennia marina HOM05D004190 ORTHO05D004692 7.2e-07 59.3 95 36.8
Manes.14G027100 Manihot esculenta HOM05D003520 ORTHO05D003332 7.2e-07 59.3 83 41.0
PSO384G2347 Papaver somniferum HOM05D066734 ORTHO05D004692 7.2e-07 59.3 79 45.6
Dinv37667 Davidia involucrata HOM05D003520 ORTHO05D003332 9.4e-07 58.9 83 41.0
Oeu049557.4 Olea europaea HOM05D003520 ORTHO05D003332 9.4e-07 58.9 78 41.0
PSO339G5001 Papaver somniferum HOM05D066734 ORTHO05D004692 9.4e-07 58.9 79 45.6
Sopen03g004790 Solanum pennellii HOM05D012625 ORTHO05D003332 9.4e-07 58.9 79 40.5
AUR62017242 Chenopodium quinoa HOM05D003520 ORTHO05D003332 1.2e-06 58.5 141 37.6
Gorai.001G110900 Gossypium raimondii HOM05D004190 ORTHO05D004692 1.2e-06 58.5 92 41.3
PGSC0003DMG400042312 Solanum tuberosum HOM05D004190 ORTHO05D018124 1.2e-06 58.5 98 32.7
CAN.G745.25 Capsicum annuum HOM05D004190 ORTHO05D004692 1.6e-06 58.2 131 35.1
vmacro03111 Vaccinium macrocarpon HOM05D006496 ORTHO05D008390 1.6e-06 58.2 167 28.7
COL.COLO4_34422 Corchorus olitorius HOM05D003520 ORTHO05D003332 2.1e-06 57.8 100 37.0
Gohir.D07G103000 Gossypium hirsutum HOM05D004190 ORTHO05D004692 2.1e-06 57.8 48 54.2
HanXRQChr09g0253501 Helianthus annuus HOM05D003520 ORTHO05D003332 2.1e-06 57.8 119 37.8
Lj3g0009171 Lotus japonicus HOM05D006496 ORTHO05D008390 2.1e-06 57.8 192 27.6
Dinv28454 Davidia involucrata HOM05D003520 ORTHO05D003332 2.7e-06 57.4 140 35.0
MD06G1076800 Malus domestica HOM05D003520 ORTHO05D003332 2.7e-06 57.4 66 43.9
Potri.009G027600 Populus trichocarpa HOM05D006496 ORTHO05D008390 2.7e-06 57.4 151 29.8
GSVIVG01019812001 Vitis vinifera HOM05D000016 ORTHO05D000109 2.7e-06 57.4 66 43.9
AUR62010600 Chenopodium quinoa HOM05D003520 ORTHO05D003332 3.6e-06 57.0 97 39.2
PSO478G3392 Papaver somniferum HOM05D003520 ORTHO05D003332 3.6e-06 57.0 109 36.7
AUR62016000 Chenopodium quinoa HOM05D025484 ORTHO05D003332 4.7e-06 56.6 128 36.7
FAN18G3894 Fragaria x ananassa HOM05D003520 ORTHO05D003332 4.7e-06 56.6 78 41.0
Manes.04G031000 Manihot esculenta HOM05D006496 ORTHO05D008390 4.7e-06 56.6 180 28.3
FAN04G1936 Fragaria x ananassa HOM05D003520 ORTHO05D003332 6.1e-06 56.2 110 31.8
Oeu002348.1 Olea europaea HOM05D004190 ORTHO05D004692 6.1e-06 56.2 142 28.9
PSO782G5503 Papaver somniferum HOM05D003520 ORTHO05D003332 6.1e-06 56.2 109 36.7
CAN.G1733.7 Capsicum annuum HOM05D000006 ORTHO05D004030 8.0e-06 55.8 189 26.5
CAN.G420.5 Capsicum annuum HOM05D006496 ORTHO05D008390 8.0e-06 55.8 186 27.4
ClCG05G007960 Citrullus lanatus HOM05D003520 ORTHO05D003332 8.0e-06 55.8 72 43.1


User provided reference genes

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