Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g14240_MAGBIO Magnolia biondii HOM05D005846 ORTHO05D007369 2.7e-122 442.2 255 100.0
Aqoxy5G03824 Aquilegia oxysepala HOM05D005846 ORTHO05D007369 3.1e-94 349.0 214 84.1
CiPaw.06G031700 Carya illinoinensis HOM05D005846 ORTHO05D007369 5.3e-94 348.2 215 84.2
Cfa011122 Carpinus fangiana HOM05D005846 ORTHO05D007369 1.0e-92 344.0 215 85.1
QL04p035021 Quercus lobata HOM05D005846 ORTHO05D007369 1.0e-92 344.0 214 83.6
Prupe.2G134200 Prunus persica HOM05D005846 ORTHO05D007369 1.3e-92 343.6 213 84.5
COL.COLO4_35176 Corchorus olitorius HOM05D005846 ORTHO05D007369 5.0e-92 341.7 213 83.6
MD07G1110700 Malus domestica HOM05D005846 ORTHO05D007369 6.5e-92 341.3 215 83.3
Dinv44098 Davidia involucrata HOM05D005846 ORTHO05D007369 8.5e-92 340.9 215 84.2
arahy.Tifrunner.gnm1.ann1.DPE9LE Arachis hypogaea HOM05D005846 ORTHO05D007369 1.1e-91 340.5 210 84.3
arahy.Tifrunner.gnm1.ann1.SA9NP4 Arachis hypogaea HOM05D005846 ORTHO05D007369 1.1e-91 340.5 210 84.3
HanXRQChr06g0168821 Helianthus annuus HOM05D005846 ORTHO05D007369 1.1e-91 340.5 214 82.7
Haze_02742 Corylus avellana HOM05D005846 ORTHO05D007369 1.5e-91 340.1 224 82.1
Thecc.01G387400 Theobroma cacao HOM05D005846 ORTHO05D007369 2.5e-91 339.3 213 83.6
TWI14G0811 Tripterygium wilfordii HOM05D005846 ORTHO05D007369 5.5e-91 338.2 212 83.0
vmacro13469 Vaccinium macrocarpon HOM05D005846 ORTHO05D007369 5.5e-91 338.2 215 80.9
Duzib116G0440 Durio zibethinus HOM05D005846 ORTHO05D007369 1.2e-90 337.0 211 82.5
CSS0006984 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 1.6e-90 336.7 215 81.9
Potri.014G057000 Populus trichocarpa HOM05D005846 ORTHO05D007369 1.6e-90 336.7 211 83.4
Rhsim02G0216700 Rhododendron simsii HOM05D005846 ORTHO05D007369 2.1e-90 336.3 213 80.8
CSS0013945 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 2.7e-90 335.9 215 81.9
Ciclev10019079m.g Citrus clementina HOM05D005846 ORTHO05D007369 3.6e-90 335.5 215 81.4
ECA236G0469 Erigeron canadensis HOM05D005846 ORTHO05D007369 3.6e-90 335.5 209 82.8
Actinidia22778 Actinidia chinensis HOM05D005846 ORTHO05D007369 4.7e-90 335.1 209 84.2
Actinidia22833 Actinidia chinensis HOM05D005846 ORTHO05D007369 4.7e-90 335.1 209 84.2
PGR004G1251 Punica granatum HOM05D005846 ORTHO05D007369 4.7e-90 335.1 212 82.1
GSVIVG01018216001 Vitis vinifera HOM05D005846 ORTHO05D007369 1.8e-89 333.2 215 80.5
Psat3g158120 Pisum sativum HOM05D005846 ORTHO05D007369 2.3e-89 332.8 215 81.9
RcHm_v2.0_Chr1g0348261 Rosa chinensis HOM05D005846 ORTHO05D007369 3.0e-89 332.4 209 83.7
Manes.05G051500 Manihot esculenta HOM05D005846 ORTHO05D007369 4.0e-89 332.0 207 84.1
TPR.G39153 Trifolium pratense HOM05D005846 ORTHO05D007369 6.8e-89 331.3 215 81.4
Lsat_1_v5_gn_7_11161 Lactuca sativa HOM05D005846 ORTHO05D007369 1.2e-88 330.5 218 80.3
Medtr7g045280 Medicago truncatula HOM05D005846 ORTHO05D007369 1.2e-88 330.5 213 81.2
Sabra14G0041600 Salix brachista HOM05D002053 ORTHO05D002135 1.5e-88 330.1 204 84.3
Atru.chr5.196 Acer truncatum HOM05D005846 ORTHO05D007369 2.0e-88 329.7 209 81.8
VMungo1383G2837 Vigna mungo HOM05D005846 ORTHO05D007369 2.0e-88 329.7 210 81.9
CsaV3_6G009050 Cucumis sativus L. HOM05D005846 ORTHO05D007369 2.6e-88 329.3 214 80.8
Lj9C561G11 Lonicera japonica HOM05D005846 ORTHO05D007369 2.6e-88 329.3 212 79.2
CANSAT21G1379 Cannabis sativa HOM05D005846 ORTHO05D007369 3.4e-88 328.9 215 80.0
Eucgr.D02512 Eucalyptus grandis HOM05D005846 ORTHO05D007369 5.7e-88 328.2 209 81.8
FAN03G1473 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.7e-88 328.2 216 80.6
DCAR_031886 Daucus carota HOM05D005846 ORTHO05D007369 7.5e-88 327.8 209 80.4
FAN06G0321 Fragaria x ananassa HOM05D005846 ORTHO05D007369 9.7e-88 327.4 215 79.5
Glyma.01G074700 Glycine max HOM05D005846 ORTHO05D007369 9.7e-88 327.4 214 80.4
Phvul.007G143350 Phaseolus vulgaris HOM05D005846 ORTHO05D007369 9.7e-88 327.4 213 79.8
FAN01G1706 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.3e-87 327.0 215 79.5
FAN10G4209 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.3e-87 327.0 215 79.5
AL4G44100 Arabidopsis lyrata HOM05D005846 ORTHO05D007369 2.2e-87 326.2 210 79.5
FAN10G1341 Fragaria x ananassa HOM05D005846 ORTHO05D007369 2.2e-87 326.2 215 79.5
AT2G45000 Arabidopsis thaliana HOM05D005846 ORTHO05D007369 8.3e-87 324.3 210 79.5
Gohir.D11G145600 Gossypium hirsutum HOM05D005846 ORTHO05D007369 8.3e-87 324.3 214 80.4
SGA_v2.0_scaffold52G19202 Striga asiatica HOM05D005846 ORTHO05D007369 8.3e-87 324.3 211 79.1
Carub.0004s2760 Capsella rubella HOM05D005846 ORTHO05D007369 1.1e-86 323.9 210 79.0
Lj1g0009878 Lotus japonicus HOM05D005846 ORTHO05D007369 1.1e-86 323.9 214 79.0
CARHR140260 Cardamine hirsuta HOM05D005846 ORTHO05D007369 1.4e-86 323.6 210 79.0
Glyma.11G162365 Glycine max HOM05D005846 ORTHO05D007369 1.4e-86 323.6 210 81.4
FAN06G3163 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.8e-86 323.2 215 78.6
Nitab4.5_0003110g0060 Nicotiana tabacum HOM05D005846 ORTHO05D007369 1.8e-86 323.2 208 79.8
Thhalv10001339m.g Eutrema salsugineum HOM05D005846 ORTHO05D007369 3.1e-86 322.4 238 71.8
Sp4g27070 Schrenkiella parvula HOM05D005846 ORTHO05D007369 3.1e-86 322.4 254 68.9
ATR0559G037 Amborella trichopoda HOM05D005846 ORTHO05D007369 5.3e-86 321.6 257 72.0
THA.LOC104802481 Tarenaya hassleriana HOM05D005846 ORTHO05D007369 5.3e-86 321.6 213 80.3
BraA05t19484Z Brassica rapa HOM05D005846 ORTHO05D007369 7.0e-86 321.2 213 77.9
Cc02_g24740 Coffea canephora HOM05D005846 ORTHO05D007369 7.0e-86 321.2 213 77.9
A05p05100 Brassica napus HOM05D005846 ORTHO05D007369 9.1e-86 320.9 211 78.7
Migut.B01566 Erythranthe guttata HOM05D005846 ORTHO05D007369 1.6e-85 320.1 213 78.4
Gohir.A11G139400 Gossypium hirsutum HOM05D005846 ORTHO05D007369 1.6e-85 320.1 214 79.0
Sed0022623 Sechium edule HOM05D005846 ORTHO05D007369 1.6e-85 320.1 229 75.5
CAN.G899.26 Capsicum annuum HOM05D005846 ORTHO05D007369 2.0e-85 319.7 212 78.3
Solyc01g090670.3 Solanum lycopersicum HOM05D005846 ORTHO05D007369 2.7e-85 319.3 208 79.8
CDE04G1707 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 3.5e-85 318.9 260 68.5
BcaC02g12270 Brassica carinata HOM05D005846 ORTHO05D007369 4.5e-85 318.5 214 77.1
PSO675G5996 Papaver somniferum HOM05D005846 ORTHO05D007369 4.5e-85 318.5 259 70.7
Hund27391 Selenicereus undatus HOM05D005846 ORTHO05D007369 7.7e-85 317.8 206 80.1
Gorai.007G156100 Gossypium raimondii HOM05D005846 ORTHO05D007369 1.0e-84 317.4 221 77.8
Sopen01g036400 Solanum pennellii HOM05D005846 ORTHO05D007369 1.3e-84 317.0 208 79.3
MSTRG.28219 Avicennia marina HOM05D005846 ORTHO05D007369 3.8e-84 315.5 209 78.5
C04p05950 Brassica napus HOM05D005846 ORTHO05D007369 3.8e-84 315.5 214 76.6
BolC4t22226H Brassica oleracea HOM05D005846 ORTHO05D007369 3.8e-84 315.5 214 76.6
CDE02G2440 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 6.5e-84 314.7 260 67.3
Ca_26287_v3 Cicer arietinum L. HOM05D005846 ORTHO05D007369 8.5e-84 314.3 255 73.7
Ah.05g173450 Amaranthus hybridus HOM05D005846 ORTHO05D007369 1.1e-83 313.9 207 78.3
PSO541G5798 Papaver somniferum HOM05D005846 ORTHO05D007369 1.5e-83 313.5 259 70.7
Aa31LG1G26590 Aethionema arabicum HOM05D005846 ORTHO05D007369 7.2e-83 311.2 213 75.6
Lalb_Chr19g0126671 Lupinus albus HOM05D005846 ORTHO05D007369 1.6e-82 310.1 216 76.4
TAR375G0515 Trochodendron aralioides HOM05D005846 ORTHO05D007369 2.1e-82 309.7 185 89.2
MELO3C022237.2 Cucumis melo HOM05D005846 ORTHO05D007369 6.1e-82 308.1 253 68.4
ClCG06G002930 Citrullus lanatus HOM05D005846 ORTHO05D007369 3.0e-81 305.8 196 81.6
EL10Ac1g00809 Beta vulgaris HOM05D005846 ORTHO05D007369 1.2e-80 303.9 202 78.7
Nn6g33892 Nelumbo nucifera HOM05D005846 ORTHO05D007369 2.6e-80 302.8 211 78.7
Peaxi162Scf00377g00722 Petunia axillaris HOM05D005846 ORTHO05D007369 9.8e-80 300.8 195 79.0
unitig_26.g8879 Utricularia gibba HOM05D005846 ORTHO05D007369 1.8e-78 296.6 214 73.4
Zm00001eb367060 Zea mays HOM05D005846 ORTHO05D007369 3.1e-78 295.8 212 72.2
HanXRQChr04g0123471 Helianthus annuus HOM05D005846 ORTHO05D007369 1.9e-75 286.6 186 80.6
Oeu061505.1 Olea europaea HOM05D005846 ORTHO05D007369 4.7e-74 282.0 184 79.9
FvH4_7g10470 Fragaria vesca HOM05D005846 ORTHO05D007369 6.1e-74 281.6 186 79.6
AagrBONN_evm.TU.Sc2ySwM_117.1077 Anthoceros agrestis HOM05D005846 ORTHO05D007369 3.4e-72 275.8 198 70.2
HPP92_027757 Vanilla planifolia HOM05D005846 ORTHO05D007369 1.1e-70 270.8 192 72.4
Pp3c15_14630 Physcomitrium patens HOM05D005846 ORTHO05D007369 1.8e-70 270.0 210 66.2
Mapoly0005s0221 Marchantia polymorpha HOM05D005846 ORTHO05D007369 9.2e-70 267.7 207 66.7
arahy.Tifrunner.gnm1.ann1.2XVX2B Arachis hypogaea HOM05D005846 ORTHO05D007369 1.1e-67 260.8 225 65.3
AUR62004139 Chenopodium quinoa HOM05D005846 ORTHO05D007369 1.3e-63 247.3 203 66.0
PGR004G1857 Punica granatum HOM05D005846 ORTHO05D007369 1.6e-61 240.4 157 81.5
AUR62013700 Chenopodium quinoa HOM05D005846 ORTHO05D007369 1.2e-58 230.7 188 67.0
Sc02g0002920 Simmondsia chinensis HOM05D005846 ORTHO05D007369 1.6e-58 230.3 179 72.1
Nitab4.5_0001823g0090 Nicotiana tabacum HOM05D005846 ORTHO05D007369 2.0e-56 223.4 171 71.3
CBR_g21126 Chara braunii HOM05D005846 ORTHO05D007369 7.1e-54 214.9 190 62.6
HPP92_002750 Vanilla planifolia HOM05D005846 ORTHO05D007369 1.7e-44 183.7 150 64.0
Os01g0856600 Oryza sativa ssp. japonica HOM05D005846 ORTHO05D007369 2.4e-33 146.7 115 63.5
Atru.chr5.198 Acer truncatum HOM05D002424 ORTHO05D002640 4.9e-31 139.0 94 74.5
Cre16.g677700 Chlamydomonas reinhardtii HOM05D005846 ORTHO05D007369 7.9e-29 131.7 212 39.2
arahy.Tifrunner.gnm1.ann1.V1AVP1 Arachis hypogaea HOM05D005846 ORTHO05D007369 3.9e-28 129.4 103 72.8
QL04p035108 Quercus lobata HOM05D005846 ORTHO05D007369 4.0e-25 119.4 79 73.4
Cpa.g.sc22.5 Carica papaya HOM05D005846 ORTHO05D007369 5.8e-24 115.5 88 72.7
PRCOL_00002612 Prasinoderma coloniale HOM05D005846 ORTHO05D007369 1.1e-22 111.3 207 35.3
QL05p084337 Quercus lobata HOM05D005846 ORTHO05D007369 4.2e-22 109.4 64 87.5
Cpa.g.sc22.4 Carica papaya HOM05D005846 ORTHO05D007369 1.6e-21 107.5 113 54.0
QL04p035237 Quercus lobata HOM05D005846 ORTHO05D007369 2.1e-21 107.1 76 69.7
HanXRQChr12g0364311 Helianthus annuus HOM05D005846 ORTHO05D007369 1.1e-17 94.7 56 83.9
HPP92_006013 Vanilla planifolia HOM05D005846 ORTHO05D007369 1.4e-17 94.4 107 50.5
Lsat_1_v5_gn_4_126501 Lactuca sativa HOM05D005846 ORTHO05D007369 9.0e-17 91.7 63 76.2
Atru.chr5.201 Acer truncatum HOM05D005846 ORTHO05D007369 2.0e-16 90.5 63 68.3
HPP92_002751 Vanilla planifolia HOM05D005846 ORTHO05D007369 2.6e-16 90.1 100 52.0
HanXRQChr16g0530801 Helianthus annuus HOM05D005846 ORTHO05D007369 5.8e-16 89.0 180 36.7
C09p68450 Brassica napus HOM05D005846 ORTHO05D007369 3.8e-15 86.3 64 70.3
HanXRQChr01g0009681 Helianthus annuus HOM05D005846 ORTHO05D007369 3.2e-14 83.2 168 36.3
MCO01G259 Micromonas commoda HOM05D005846 ORTHO05D007369 7.9e-13 78.6 138 32.6
MCO01G299 Micromonas commoda HOM05D005846 ORTHO05D007369 7.9e-13 78.6 138 32.6
A05p20700 Brassica napus HOM05D005846 ORTHO05D007369 3.9e-12 76.3 52 71.2
HanXRQChr02g0053971 Helianthus annuus HOM05D005846 ORTHO05D000176 6.7e-12 75.5 159 35.8
SalBow5G1215 Salvia bowleyana HOM05D005846 ORTHO05D007369 3.4e-08 63.2 58 63.8
HanXRQChr12g0366671 Helianthus annuus HOM05D005846 ORTHO05D007369 1.3e-07 61.2 36 80.6
BolC9t59592H Brassica oleracea HOM05D022734 ORTHO05D024517 5.0e-07 59.3 35 77.1
Cfa023102 Carpinus fangiana HOM05D000298 ORTHO05D125655 2.5e-06 57.0 150 25.3


User provided reference genes

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