Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g34406_MAGBIO Magnolia biondii HOM05D005801 ORTHO05D008555 2.5e-283 978.4 599 100.0
TAR636G1320 Trochodendron aralioides HOM05D005801 ORTHO05D008555 9.4e-158 561.2 401 73.8
Cc06_g10480 Coffea canephora HOM05D005801 ORTHO05D008555 5.7e-147 525.4 403 68.7
CSS0008146 Camellia sinensis var. sinensis HOM05D005801 ORTHO05D008555 2.4e-145 520.0 398 69.1
Dinv36686 Davidia involucrata HOM05D005801 ORTHO05D008555 2.4e-145 520.0 399 69.7
Thecc.09G100600 Theobroma cacao HOM05D005801 ORTHO05D008555 2.7e-144 516.5 401 68.1
vmacro06253 Vaccinium macrocarpon HOM05D005801 ORTHO05D008555 4.2e-142 509.2 404 68.1
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 5.6e-142 508.8 397 68.3
Gohir.A07G009500 Gossypium hirsutum HOM05D005801 ORTHO05D008555 5.6e-142 508.8 426 65.5
Duzib132G0722 Durio zibethinus HOM05D005801 ORTHO05D008555 7.2e-142 508.4 345 75.9
Gorai.001G010100 Gossypium raimondii HOM05D005801 ORTHO05D008555 8.0e-141 505.0 425 65.4
Cfa003179 Carpinus fangiana HOM05D005801 ORTHO05D008555 1.8e-140 503.8 396 67.2
QL02p041581 Quercus lobata HOM05D005801 ORTHO05D008555 1.8e-140 503.8 399 65.4
Gohir.D07G009800 Gossypium hirsutum HOM05D005801 ORTHO05D008555 2.3e-140 503.4 425 65.2
Lj4P387T11 Lonicera japonica HOM05D005801 ORTHO05D008555 8.9e-140 501.5 405 67.7
Prupe.7G219800 Prunus persica HOM05D005801 ORTHO05D008555 1.2e-139 501.1 406 65.0
Oeu053186.1 Olea europaea HOM05D005801 ORTHO05D008555 2.6e-139 500.0 398 66.8
Nitab4.5_0000066g0110 Nicotiana tabacum HOM05D005801 ORTHO05D008555 1.3e-138 497.7 391 68.5
CiPaw.04G157900 Carya illinoinensis HOM05D005801 ORTHO05D008555 1.7e-138 497.3 345 73.6
COL.COLO4_34743 Corchorus olitorius HOM05D005801 ORTHO05D008555 4.1e-137 492.7 402 65.7
Nitab4.5_0001703g0010 Nicotiana tabacum HOM05D005801 ORTHO05D008555 4.1e-137 492.7 391 67.8
Aqoxy7G01401 Aquilegia oxysepala HOM05D005801 ORTHO05D008555 5.4e-137 492.3 338 73.7
Sopen05g014540 Solanum pennellii HOM05D005801 ORTHO05D008555 5.4e-137 492.3 390 67.7
Manes.16G108700 Manihot esculenta HOM05D005801 ORTHO05D008555 9.2e-137 491.5 348 72.7
Peaxi162Scf00720g00044 Petunia axillaris HOM05D005801 ORTHO05D008555 2.0e-136 490.3 393 66.9
RcHm_v2.0_Chr2g0091911 Rosa chinensis HOM05D005801 ORTHO05D008555 2.0e-136 490.3 398 64.3
Solyc05g017990.4 Solanum lycopersicum HOM05D005801 ORTHO05D008555 2.0e-136 490.3 390 67.7
PGSC0003DMG400038162 Solanum tuberosum HOM05D005801 ORTHO05D008555 2.0e-136 490.3 390 67.2
FAN23G0343 Fragaria x ananassa HOM05D005801 ORTHO05D008555 2.7e-136 490.0 346 71.1
FAN19G1715 Fragaria x ananassa HOM05D005801 ORTHO05D008555 3.5e-136 489.6 346 70.8
FvH4_1g06150 Fragaria vesca HOM05D005801 ORTHO05D008555 7.8e-136 488.4 346 70.5
Potri.018G087800 Populus trichocarpa HOM05D005801 ORTHO05D008555 1.7e-135 487.3 347 73.2
TWI63G0976 Tripterygium wilfordii HOM05D005801 ORTHO05D008555 2.3e-135 486.9 359 70.5
FAN28G2516 Fragaria x ananassa HOM05D005801 ORTHO05D008555 6.6e-135 485.3 420 61.2
Rhsim03G0236600 Rhododendron simsii HOM05D005801 ORTHO05D008555 1.9e-134 483.8 404 65.8
CAN.G370.29 Capsicum annuum HOM05D005801 ORTHO05D008555 2.5e-134 483.4 392 66.1
Lalb_Chr05g0223241 Lupinus albus HOM05D005801 ORTHO05D008555 7.3e-134 481.9 345 73.0
DCAR_028663 Daucus carota HOM05D005801 ORTHO05D008555 1.2e-133 481.1 345 72.8
FAN26G1273 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.2e-133 481.1 346 69.7
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 1.2e-133 481.1 391 66.8
Sabra18G0076100 Salix brachista HOM05D005801 ORTHO05D008555 1.6e-133 480.7 398 65.8
CANSAT21G1751 Cannabis sativa HOM05D005801 ORTHO05D008555 2.1e-133 480.3 380 66.6
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 2.1e-133 480.3 398 64.1
VMungo0251G1949 Vigna mungo HOM05D005801 ORTHO05D008555 2.8e-133 479.9 345 71.6
MELO3C015412.2 Cucumis melo HOM05D005801 ORTHO05D008555 4.7e-133 479.2 397 63.2
arahy.Tifrunner.gnm1.ann1.BF4XTR Arachis hypogaea HOM05D005801 ORTHO05D008555 6.2e-133 478.8 347 70.9
FAN19G0317 Fragaria x ananassa HOM05D005801 ORTHO05D008555 8.0e-133 478.4 337 70.3
EL10Ac8g18377 Beta vulgaris HOM05D005801 ORTHO05D008555 1.0e-132 478.0 395 64.6
SalBow1G2797 Salvia bowleyana HOM05D005801 ORTHO05D008555 1.8e-132 477.2 399 65.9
Phvul.002G308600 Phaseolus vulgaris HOM05D005801 ORTHO05D008555 5.2e-132 475.7 345 71.0
MD02G1065700 Malus domestica HOM05D005801 ORTHO05D008555 5.8e-131 472.2 345 68.4
FAN26G1315 Fragaria x ananassa HOM05D005801 ORTHO05D008555 9.8e-131 471.5 346 69.1
Eucgr.C00997 Eucalyptus grandis HOM05D005801 ORTHO05D008555 1.7e-130 470.7 348 71.0
MSTRG.10602 Avicennia marina HOM05D005801 ORTHO05D008555 2.9e-130 469.9 405 62.5
Glyma.08G033500 Glycine max HOM05D005801 ORTHO05D008555 4.9e-130 469.2 345 71.3
THA.LOC104814572 Tarenaya hassleriana HOM05D005801 ORTHO05D008555 4.9e-130 469.2 346 70.2
PSO063G7511 Papaver somniferum HOM05D005801 ORTHO05D008555 9.2e-129 464.9 291 80.4
Psat7g016720 Pisum sativum HOM05D005801 ORTHO05D008555 1.2e-128 464.5 342 69.9
PSO832G4312 Papaver somniferum HOM05D005801 ORTHO05D008555 2.0e-128 463.8 291 80.1
Sc18g0001500 Simmondsia chinensis HOM05D005801 ORTHO05D008555 2.7e-128 463.4 404 62.6
ATR0681G166 Amborella trichopoda HOM05D005801 ORTHO05D008555 4.6e-128 462.6 345 69.0
Lj4g0016627 Lotus japonicus HOM05D005801 ORTHO05D008555 4.6e-128 462.6 341 70.4
Ca_17365_v3 Cicer arietinum L. HOM05D005801 ORTHO05D008555 1.7e-127 460.7 360 66.7
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 2.3e-127 460.3 402 61.7
Migut.K00541 Erythranthe guttata HOM05D005801 ORTHO05D008555 3.9e-127 459.5 411 61.6
unitig_46.g18397 Utricularia gibba HOM05D005801 ORTHO05D008555 5.0e-127 459.1 345 67.8
Ciclev10007826m.g Citrus clementina HOM05D005801 ORTHO05D008555 4.3e-126 456.1 342 68.1
Sed0027809 Sechium edule HOM05D005801 ORTHO05D008555 2.8e-125 453.4 409 61.1
Medtr8g102480 Medicago truncatula HOM05D005801 ORTHO05D008555 2.3e-124 450.3 333 69.7
CDE04G1187 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 8.3e-122 441.8 433 57.7
Sp3g33210 Schrenkiella parvula HOM05D005801 ORTHO05D008555 3.2e-121 439.9 398 60.1
Thhalv10002296m.g Eutrema salsugineum HOM05D005801 ORTHO05D008555 2.1e-120 437.2 401 59.6
AL3G48350 Arabidopsis lyrata HOM05D005801 ORTHO05D008555 1.0e-119 434.9 422 58.3
Carub.0003s3414 Capsella rubella HOM05D005801 ORTHO05D008555 5.1e-119 432.6 403 59.8
CARHR110310 Cardamine hirsuta HOM05D005801 ORTHO05D008555 1.9e-118 430.6 429 56.9
SGA_v2.0_scaffold129G34141 Striga asiatica HOM05D005801 ORTHO05D008555 2.5e-118 430.3 406 59.1
AT2G19870 Arabidopsis thaliana HOM05D005801 ORTHO05D008555 3.3e-118 429.9 425 58.4
ECA234G2262 Erigeron canadensis HOM05D005801 ORTHO05D008555 3.6e-117 426.4 347 65.4
Actinidia32650 Actinidia chinensis HOM05D005801 ORTHO05D008555 2.0e-115 420.6 315 70.5
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 5.8e-115 419.1 454 53.3
BcaB03g16775 Brassica carinata HOM05D005801 ORTHO05D008555 7.6e-115 418.7 377 61.5
BcaC06g36648 Brassica carinata HOM05D005801 ORTHO05D008555 2.2e-114 417.2 349 65.9
BolC7t40588H Brassica oleracea HOM05D005801 ORTHO05D008555 2.2e-114 417.2 349 65.9
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 7.1e-113 412.1 341 64.5
A07p00840 Brassica napus HOM05D005801 ORTHO05D008555 4.6e-112 409.5 387 61.5
Aa31LG8G16820 Aethionema arabicum HOM05D005801 ORTHO05D008555 6.0e-112 409.1 406 56.7
BraA07t27882Z Brassica rapa HOM05D005801 ORTHO05D008555 7.8e-112 408.7 376 62.2
C07p01810 Brassica napus HOM05D005801 ORTHO05D008555 1.7e-111 407.5 409 58.4
Cpa.g.sc40.94 Carica papaya HOM05D005801 ORTHO05D008555 1.8e-108 397.5 272 73.2
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 3.8e-106 389.8 276 73.2
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 3.8e-106 389.8 276 73.2
AUR62021403 Chenopodium quinoa HOM05D005801 ORTHO05D008555 4.9e-106 389.4 451 49.7
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 9.3e-105 385.2 276 72.8
SHI02689 Sapria himalayana HOM05D005801 ORTHO05D008555 2.1e-104 384.0 410 53.2
AUR62010892 Chenopodium quinoa HOM05D005801 ORTHO05D008555 1.9e-102 377.5 428 50.9
MD15G1196600 Malus domestica HOM05D005801 ORTHO05D008555 5.4e-97 359.4 248 72.6
Mapoly0135s0034 Marchantia polymorpha HOM05D005801 ORTHO05D008555 1.1e-76 292.0 376 46.3
Pp3c17_17180 Physcomitrium patens HOM05D005801 ORTHO05D008555 3.2e-73 280.4 280 52.9
FvH4_1g06190 Fragaria vesca HOM05D005801 ORTHO05D008555 7.2e-73 279.3 174 78.2
CBR_g20364 Chara braunii HOM05D005801 ORTHO05D008555 1.4e-68 265.0 286 49.0
SMO367G0373 Selaginella moellendorffii HOM05D005801 ORTHO05D008555 3.3e-62 243.8 273 49.8
Lj6C67T4 Lonicera japonica HOM05D005801 ORTHO05D008555 9.7e-62 242.3 189 67.7
Lalb_Chr09g0331541 Lupinus albus HOM05D005801 ORTHO05D008555 8.2e-61 239.2 206 63.1
CAN.G640.23 Capsicum annuum HOM05D005801 ORTHO05D008555 1.6e-51 208.4 208 55.3
Cre13.g566150 Chlamydomonas reinhardtii HOM05D005801 ORTHO05D008555 1.2e-48 198.7 235 46.4
MCO03G539 Micromonas commoda HOM05D005801 ORTHO05D008555 1.5e-46 191.8 297 41.4
Os01g0742000 Oryza sativa ssp. japonica HOM05D005801 ORTHO05D008555 1.5e-46 191.8 141 68.8
PRCOL_00003145 Prasinoderma coloniale HOM05D005801 ORTHO05D008555 1.5e-46 191.8 280 41.8
CAN.G775.15 Capsicum annuum HOM05D005801 ORTHO05D008555 2.0e-46 191.4 285 42.5
CDE02G3237 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 1.3e-42 178.7 142 67.6
CAN.G1277.2 Capsicum annuum HOM05D005801 ORTHO05D008555 2.2e-34 151.4 287 38.3
HanXRQChr12g0378121 Helianthus annuus HOM05D005801 ORTHO05D008555 2.7e-27 127.9 148 45.9
Lalb_Chr09g0331551 Lupinus albus HOM05D005801 ORTHO05D008555 4.4e-22 110.5 163 43.6
CAN.G77.3 Capsicum annuum HOM05D005801 ORTHO05D008555 1.0e-18 99.4 77 62.3
BcaC04g20246 Brassica carinata HOM05D005801 ORTHO05D016715 7.3e-17 93.2 83 54.2
BolC9t57462H Brassica oleracea HOM05D005801 ORTHO05D016715 7.3e-17 93.2 83 54.2
EL10Ac8g19871 Beta vulgaris HOM05D005801 ORTHO05D008555 1.2e-16 92.4 69 65.2
C09p45950 Brassica napus HOM05D005801 ORTHO05D016715 1.2e-16 92.4 83 53.0
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 6.8e-15 86.7 191 30.9
A07p26140 Brassica napus HOM05D005801 ORTHO05D013666 2.6e-14 84.7 70 58.6
BcaC03g16316 Brassica carinata HOM05D005801 ORTHO05D016715 5.8e-14 83.6 71 56.3
C03p54440 Brassica napus HOM05D005801 ORTHO05D041341 1.3e-13 82.4 56 66.1
BolC3t17730H Brassica oleracea HOM05D005801 ORTHO05D041341 1.3e-13 82.4 56 66.1
BraA07t30260Z Brassica rapa HOM05D005801 ORTHO05D013666 1.3e-13 82.4 70 57.1
BcaC04g22492 Brassica carinata HOM05D005801 ORTHO05D016715 6.0e-11 73.6 64 59.4
BcaB08g34890 Brassica carinata HOM05D005801 ORTHO05D008555 1.4e-07 62.4 81 50.6
BcaB07g33268 Brassica carinata HOM05D005801 ORTHO05D016715 2.6e-06 58.2 89 42.7
BcaB07g33439 Brassica carinata HOM05D005801 ORTHO05D016715 2.6e-06 58.2 89 42.7


User provided reference genes

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