Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI03_g28305_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 7.2e-209 730.3 370 100.0
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 2.0e-113 413.3 299 72.2
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 5.9e-110 401.7 300 70.0
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 7.7e-110 401.4 291 70.4
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 1.3e-101 374.0 305 64.3
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 1.7e-101 373.6 305 64.3
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 6.1e-99 365.2 295 66.4
ATR0665G194 Amborella trichopoda HOM05D004426 ORTHO05D005417 1.4e-98 364.0 295 61.7
Dinv31767 Davidia involucrata HOM05D004426 ORTHO05D005417 1.5e-97 360.5 300 64.0
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 3.1e-95 352.8 300 65.0
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 4.1e-95 352.4 300 64.3
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 7.7e-94 348.2 305 61.6
CSS0006601 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 4.2e-92 342.4 305 62.0
CSS0032246 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 4.2e-92 342.4 305 62.0
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.2e-91 340.9 305 59.7
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 1.0e-90 337.8 302 62.3
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 1.8e-90 337.0 295 63.1
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 3.0e-90 336.3 305 61.6
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.2e-89 334.3 300 61.3
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 2.0e-89 333.6 295 61.7
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 3.4e-89 332.8 300 61.3
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 3.4e-89 332.8 304 61.2
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 5.7e-89 332.0 300 61.0
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 9.8e-89 331.3 300 62.0
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 1.7e-88 330.5 305 61.0
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 2.2e-88 330.1 295 62.7
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 2.9e-88 329.7 295 61.4
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 3.7e-88 329.3 300 61.0
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 4.9e-88 328.9 300 60.7
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 4.9e-88 328.9 299 59.5
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 1.4e-87 327.4 305 60.7
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 1.6e-86 323.9 305 58.4
Haze_20160 Corylus avellana HOM05D004426 ORTHO05D005417 2.0e-86 323.6 343 55.1
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 2.0e-86 323.6 306 61.8
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 2.7e-86 323.2 305 58.0
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 3.5e-86 322.8 299 60.2
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 1.0e-85 321.2 305 58.7
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 1.3e-85 320.9 305 57.4
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 2.3e-85 320.1 305 58.0
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 2.9e-85 319.7 278 63.3
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 2.9e-85 319.7 305 58.7
MD12G1041400 Malus domestica HOM05D004426 ORTHO05D005417 3.9e-85 319.3 300 58.7
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 5.0e-85 318.9 299 60.5
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 6.6e-85 318.5 305 58.4
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 3.3e-84 316.2 302 56.3
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 5.6e-84 315.5 306 59.8
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 2.1e-83 313.5 296 58.4
HPP92_005908 Vanilla planifolia HOM05D004426 ORTHO05D005417 6.2e-83 312.0 290 58.3
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 1.2e-81 307.8 304 57.2
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 5.8e-81 305.4 345 52.8
Sc22g0002960 Simmondsia chinensis HOM05D004426 ORTHO05D005417 7.5e-81 305.1 295 56.9
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 6.4e-80 302.0 296 56.8
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 1.4e-79 300.8 300 55.3
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 2.4e-79 300.1 306 55.9
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 5.4e-79 298.9 229 69.9
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 2.0e-78 297.0 272 59.6
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 1.3e-77 294.3 272 58.8
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 1.3e-77 294.3 263 60.1
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 6.6e-77 292.0 295 55.3
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 1.5e-76 290.8 296 54.7
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 2.5e-76 290.0 298 57.0
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 2.5e-76 290.0 303 55.8
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 4.3e-76 289.3 307 53.7
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 9.5e-76 288.1 307 54.1
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 3.6e-75 286.2 296 55.7
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 4.7e-75 285.8 306 55.9
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 4.7e-75 285.8 306 52.3
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 8.1e-75 285.0 295 53.6
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 8.1e-75 285.0 295 53.6
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 1.1e-74 284.6 310 51.6
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 1.8e-74 283.9 303 54.8
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 2.6e-73 280.0 288 54.5
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 4.1e-71 272.7 291 54.3
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 5.4e-71 272.3 311 52.1
AUR62040133 Chenopodium quinoa HOM05D004426 ORTHO05D005417 2.7e-70 270.0 274 56.9
Actinidia03882 Actinidia chinensis HOM05D004426 ORTHO05D005417 3.0e-69 266.5 164 82.3
CDE07G0146 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 8.6e-69 265.0 153 82.4
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 2.1e-67 260.4 320 47.8
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 1.2e-65 254.6 266 53.0
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 1.5e-65 254.2 225 60.0
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 2.6e-65 253.4 226 58.8
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 4.4e-65 252.7 225 59.1
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 7.6e-65 251.9 226 58.4
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 9.9e-65 251.5 225 58.7
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 9.9e-65 251.5 225 58.2
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 1.3e-64 251.1 226 58.0
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 2.2e-64 250.4 225 58.2
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 8.4e-64 248.4 225 57.8
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 1.9e-63 247.3 225 57.8
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 5.1e-61 239.2 225 55.6
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 6.6e-61 238.8 196 62.8
Lj1A1205T55 Lonicera japonica HOM05D004426 ORTHO05D005417 1.6e-59 234.2 247 54.7
AUR62027347 Chenopodium quinoa HOM05D004426 ORTHO05D005417 8.1e-59 231.9 245 55.9
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 1.8e-58 230.7 250 53.6
Cpa.g.sc104.20 Carica papaya HOM05D004426 ORTHO05D005417 8.4e-56 221.9 158 69.6
Oeu036110.1 Olea europaea HOM05D004426 ORTHO05D005417 5.3e-50 202.6 250 50.4
Rhsim04G0136900 Rhododendron simsii HOM05D004426 ORTHO05D005417 6.0e-46 189.1 228 51.3
Actinidia03991 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.5e-41 174.5 112 77.7
Mapoly0014s0197 Marchantia polymorpha HOM05D004426 ORTHO05D005417 1.0e-37 161.8 276 37.0
CDE04G3616 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.4e-34 151.4 188 47.3
AagrBONN_evm.TU.Sc2ySwM_368.1933 Anthoceros agrestis HOM05D004426 ORTHO05D005417 1.0e-29 135.2 136 49.3
Pp3c22_17700 Physcomitrium patens HOM05D004426 ORTHO05D005417 1.4e-26 124.8 270 35.9
SHI25008 Sapria himalayana HOM05D004426 ORTHO05D000002 6.5e-24 115.9 192 39.6
SHI25011 Sapria himalayana HOM05D000023 ORTHO05D000014 6.5e-24 115.9 79 65.8
CBR_g906 Chara braunii HOM05D004426 ORTHO05D005417 1.1e-20 105.1 127 40.2
BNapus_Darmor_BZH_scaffold_118p00130 Brassica napus HOM05D004426 ORTHO05D005417 3.9e-13 80.1 200 32.5
Mapoly0074s0069 Marchantia polymorpha HOM05D004426 ORTHO05D005417 6.7e-13 79.3 133 33.1
Psat0s2215g0200 Pisum sativum HOM05D004426 ORTHO05D005417 1.0e-08 65.5 161 31.7
Psat5g098480 Pisum sativum HOM05D004426 ORTHO05D005417 5.0e-08 63.2 147 36.1
Psat2g053520 Pisum sativum HOM05D004426 ORTHO05D005417 6.5e-08 62.8 124 34.7
Psat6g150080 Pisum sativum HOM05D004426 ORTHO05D005417 1.4e-07 61.6 109 35.8


User provided reference genes

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