Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C409G6 Lonicera japonica HOM05D005082 ORTHO05D006474 5.6e-110 401.0 207 100.0
Lj5C170T16 Lonicera japonica HOM05D005082 ORTHO05D006474 6.1e-72 274.6 190 74.7
GSVIVG01023855001 Vitis vinifera HOM05D005082 ORTHO05D006474 1.8e-71 273.1 190 74.2
Dinv14185 Davidia involucrata HOM05D005082 ORTHO05D006474 1.5e-70 270.0 190 74.2
Rhsim04G0008200 Rhododendron simsii HOM05D005082 ORTHO05D006474 1.5e-70 270.0 190 73.2
Dinv41859 Davidia involucrata HOM05D005082 ORTHO05D006474 2.6e-70 269.2 188 73.9
TAR628G0288 Trochodendron aralioides HOM05D005082 ORTHO05D006474 3.3e-70 268.9 189 73.5
CiPaw.05G095000 Carya illinoinensis HOM05D005082 ORTHO05D006474 3.7e-69 265.4 189 73.0
QL11p056821 Quercus lobata HOM05D005082 ORTHO05D006474 1.8e-68 263.1 189 73.0
Oeu006114.1 Olea europaea HOM05D005082 ORTHO05D006474 3.1e-68 262.3 190 70.5
PGR042G3506 Punica granatum HOM05D005082 ORTHO05D006474 2.6e-67 259.2 190 71.1
MD10G1011800 Malus domestica HOM05D005082 ORTHO05D006474 3.5e-67 258.8 190 70.0
Duzib132G0508 Durio zibethinus HOM05D005082 ORTHO05D006474 1.0e-66 257.3 189 69.3
MD05G1011800 Malus domestica HOM05D005082 ORTHO05D006474 1.0e-66 257.3 190 69.5
Cfa005396 Carpinus fangiana HOM05D005082 ORTHO05D006474 1.3e-66 256.9 189 72.0
Ciclev10028098m.g Citrus clementina HOM05D005082 ORTHO05D006474 2.9e-66 255.8 190 69.5
Thecc.02G148100 Theobroma cacao HOM05D005082 ORTHO05D006474 8.5e-66 254.2 190 68.9
Prupe.8G016800 Prunus persica HOM05D005082 ORTHO05D006474 1.1e-65 253.8 190 68.9
MSTRG.16959 Avicennia marina HOM05D005082 ORTHO05D006474 1.5e-65 253.4 190 69.5
Cpa.g.c29182.1 Carica papaya HOM05D005082 ORTHO05D006474 1.5e-65 253.4 190 68.4
ClCG02G003240 Citrullus lanatus HOM05D005082 ORTHO05D006474 1.5e-65 253.4 190 67.4
Actinidia20586 Actinidia chinensis HOM05D005082 ORTHO05D006474 2.5e-65 252.7 190 68.9
AL8G41310 Arabidopsis lyrata HOM05D005082 ORTHO05D006474 3.2e-65 252.3 190 67.9
PSO210G0895 Papaver somniferum HOM05D005082 ORTHO05D006474 9.4e-65 250.8 190 68.4
CsaV3_7G002150 Cucumis sativus L. HOM05D005082 ORTHO05D006474 1.2e-64 250.4 190 66.3
Gorai.002G014600 Gossypium raimondii HOM05D005082 ORTHO05D006474 1.2e-64 250.4 188 67.0
PSO675G0919 Papaver somniferum HOM05D005082 ORTHO05D006474 2.1e-64 249.6 190 68.4
Sp2g27120 Schrenkiella parvula HOM05D005082 ORTHO05D006474 2.1e-64 249.6 190 67.4
AT5G64050 Arabidopsis thaliana HOM05D005082 ORTHO05D006474 3.6e-64 248.8 189 67.2
MELO3C015693.2 Cucumis melo HOM05D005082 ORTHO05D006474 4.7e-64 248.4 190 66.3
Duzib248G1564 Durio zibethinus HOM05D005082 ORTHO05D006474 4.7e-64 248.4 189 67.2
Gohir.A01G011600 Gossypium hirsutum HOM05D005082 ORTHO05D006474 4.7e-64 248.4 190 65.3
Carub.0008s2483 Capsella rubella HOM05D005082 ORTHO05D006474 6.1e-64 248.1 190 66.8
Hund06352 Selenicereus undatus HOM05D005082 ORTHO05D006474 6.1e-64 248.1 190 68.4
Gohir.D01G012800 Gossypium hirsutum HOM05D005082 ORTHO05D006474 8.0e-64 247.7 188 66.0
THA.LOC104800058 Tarenaya hassleriana HOM05D005082 ORTHO05D006474 8.0e-64 247.7 190 66.3
Migut.B00003 Erythranthe guttata HOM05D005082 ORTHO05D006474 1.4e-63 246.9 192 67.2
Manes.02G091600 Manihot esculenta HOM05D005082 ORTHO05D006474 1.4e-63 246.9 190 65.8
ATR0605G166 Amborella trichopoda HOM05D005082 ORTHO05D006474 3.0e-63 245.7 189 66.1
CARHR277960 Cardamine hirsuta HOM05D005082 ORTHO05D006474 3.0e-63 245.7 190 66.3
Eucgr.H05005 Eucalyptus grandis HOM05D005082 ORTHO05D006474 3.0e-63 245.7 208 64.4
Nitab4.5_0010601g0010 Nicotiana tabacum HOM05D005082 ORTHO05D006474 3.0e-63 245.7 189 67.7
SGA_v2.0_scaffold5G02667 Striga asiatica HOM05D005082 ORTHO05D006474 3.0e-63 245.7 195 67.2
Sabra04G0140300 Salix brachista HOM05D005082 ORTHO05D006474 4.0e-63 245.4 188 66.0
Aa31LG1G17860 Aethionema arabicum HOM05D005082 ORTHO05D006474 5.2e-63 245.0 189 65.1
Glyma.07G124000 Glycine max HOM05D005082 ORTHO05D006474 5.2e-63 245.0 190 64.7
Atru.BG.54.p Acer truncatum HOM05D005082 ORTHO05D006474 8.8e-63 244.2 190 65.3
Nitab4.5_0001220g0040 Nicotiana tabacum HOM05D005082 ORTHO05D006474 8.8e-63 244.2 189 67.2
Sed0020521 Sechium edule HOM05D005082 ORTHO05D006474 1.2e-62 243.8 190 64.7
Thhalv10003868m.g Eutrema salsugineum HOM05D005082 ORTHO05D006474 2.0e-62 243.0 189 66.7
Lj3g0023171 Lotus japonicus HOM05D005082 ORTHO05D006474 2.0e-62 243.0 189 64.6
Peaxi162Scf00362g00137 Petunia axillaris HOM05D005082 ORTHO05D006474 2.0e-62 243.0 189 67.2
Aqoxy6G02995 Aquilegia oxysepala HOM05D005082 ORTHO05D006474 2.6e-62 242.7 189 65.6
RcHm_v2.0_Chr6g0277491 Rosa chinensis HOM05D005082 ORTHO05D006474 4.4e-62 241.9 192 65.6
TWI59G1375 Tripterygium wilfordii HOM05D005082 ORTHO05D006474 4.4e-62 241.9 190 66.3
Cc09_g10910 Coffea canephora HOM05D005082 ORTHO05D006474 9.7e-62 240.7 189 65.6
Potri.009G169700 Populus trichocarpa HOM05D005082 ORTHO05D006474 1.3e-61 240.4 188 64.9
Glyma.03G097900 Glycine max HOM05D005082 ORTHO05D006474 1.7e-61 240.0 190 64.7
BcaB02g09792 Brassica carinata HOM05D005082 ORTHO05D006474 2.2e-61 239.6 190 64.7
Phvul.010G038400 Phaseolus vulgaris HOM05D005082 ORTHO05D006474 2.8e-61 239.2 190 65.3
EL10Ac9g21557 Beta vulgaris HOM05D005082 ORTHO05D006474 3.7e-61 238.8 190 65.8
BcaC01g02661 Brassica carinata HOM05D005082 ORTHO05D006474 3.7e-61 238.8 190 64.7
A06p30760 Brassica napus HOM05D005082 ORTHO05D006474 3.7e-61 238.8 190 64.7
C03p62220 Brassica napus HOM05D005082 ORTHO05D006474 3.7e-61 238.8 190 64.7
BraA06t26018Z Brassica rapa HOM05D005082 ORTHO05D006474 3.7e-61 238.8 190 64.7
Ah.01g017700 Amaranthus hybridus HOM05D005082 ORTHO05D006474 4.8e-61 238.4 190 63.2
AUR62010207 Chenopodium quinoa HOM05D005082 ORTHO05D006474 4.8e-61 238.4 190 64.7
CAN.G1645.8 Capsicum annuum HOM05D005082 ORTHO05D006474 8.2e-61 237.7 189 65.1
COL.COLO4_03850 Corchorus olitorius HOM05D005082 ORTHO05D006474 8.2e-61 237.7 189 64.0
BolC3t18485H Brassica oleracea HOM05D005082 ORTHO05D006474 1.1e-60 237.3 190 64.7
Solyc01g112290.4 Solanum lycopersicum HOM05D005082 ORTHO05D006474 1.4e-60 236.9 189 65.6
Sopen01g054400 Solanum pennellii HOM05D005082 ORTHO05D006474 1.4e-60 236.9 189 65.6
AUR62013197 Chenopodium quinoa HOM05D005082 ORTHO05D006474 2.4e-60 236.1 190 64.2
HanXRQChr14g0455171 Helianthus annuus HOM05D005082 ORTHO05D006474 2.4e-60 236.1 186 65.6
VMungo0331G1808 Vigna mungo HOM05D005082 ORTHO05D006474 4.1e-60 235.3 190 63.7
MBI01_g28404_MAGBIO Magnolia biondii HOM05D005082 ORTHO05D006474 5.3e-60 235.0 224 58.5
vmacro16288 Vaccinium macrocarpon HOM05D005082 ORTHO05D006474 7.0e-60 234.6 247 54.7
ECA233G3220 Erigeron canadensis HOM05D005082 ORTHO05D006474 1.6e-59 233.4 189 63.5
FAN24G2999 Fragaria x ananassa HOM05D005082 ORTHO05D006474 2.0e-59 233.0 192 64.6
Ca_25889_v3 Cicer arietinum L. HOM05D005082 ORTHO05D006474 2.7e-59 232.6 190 61.1
SalBow1G4726 Salvia bowleyana HOM05D005082 ORTHO05D006474 2.7e-59 232.6 190 64.7
Lsat_1_v5_gn_8_119500 Lactuca sativa HOM05D005082 ORTHO05D006474 7.7e-59 231.1 189 61.9
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 7.7e-59 231.1 190 60.5
FAN20G1299 Fragaria x ananassa HOM05D005082 ORTHO05D006474 1.0e-58 230.7 192 63.5
FAN15G2332 Fragaria x ananassa HOM05D005082 ORTHO05D006474 1.7e-58 229.9 192 63.5
FAN27G0598 Fragaria x ananassa HOM05D005082 ORTHO05D006474 2.2e-58 229.6 192 63.0
CDE06G2564 Ceratophyllum demersum HOM05D005082 ORTHO05D006474 6.5e-58 228.0 189 59.8
DCAR_001519 Daucus carota HOM05D005082 ORTHO05D006474 1.1e-57 227.3 190 63.7
Os02g0121000 Oryza sativa ssp. japonica HOM05D005082 ORTHO05D006474 1.1e-57 227.3 189 61.9
arahy.Tifrunner.gnm1.ann1.44ERQ5 Arachis hypogaea HOM05D005082 ORTHO05D006474 1.5e-57 226.9 189 58.7
DCAR_006224 Daucus carota HOM05D005082 ORTHO05D006474 1.9e-57 226.5 190 63.2
Zm00001eb208250 Zea mays HOM05D005082 ORTHO05D006474 3.2e-57 225.7 189 60.3
arahy.Tifrunner.gnm1.ann1.M18VWQ Arachis hypogaea HOM05D005082 ORTHO05D006474 7.2e-57 224.6 189 58.2
Medtr8g009900 Medicago truncatula HOM05D005082 ORTHO05D006474 7.2e-57 224.6 190 59.5
Zm00001eb230310 Zea mays HOM05D005082 ORTHO05D006474 2.1e-56 223.0 189 60.8
Lalb_Chr07g0194811 Lupinus albus HOM05D005082 ORTHO05D006474 4.7e-56 221.9 190 59.5
Lalb_Chr12g0210191 Lupinus albus HOM05D005082 ORTHO05D006474 1.8e-55 219.9 190 59.5
TPR.G17355 Trifolium pratense HOM05D005082 ORTHO05D006474 4.4e-54 215.3 228 50.9
SEGI_01300 Sequoiadendron giganteum HOM05D005082 ORTHO05D006474 4.8e-53 211.8 186 55.9
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 2.9e-50 202.6 193 54.9
Nitab4.5_0005317g0010 Nicotiana tabacum HOM05D005082 ORTHO05D006474 1.9e-49 199.9 158 69.0
SGA_v2.0_scaffold104G30258 Striga asiatica HOM05D005082 ORTHO05D006474 1.2e-43 180.6 141 67.4
Mapoly0005s0181 Marchantia polymorpha HOM05D005082 ORTHO05D006474 9.5e-41 171.0 189 45.5
AagrBONN_evm.TU.Sc2ySwM_117.3203 Anthoceros agrestis HOM05D005082 ORTHO05D006474 4.7e-40 168.7 189 46.6
Psat4g215760 Pisum sativum HOM05D005082 ORTHO05D006474 4.7e-40 168.7 141 59.6
Sc08g0002050 Simmondsia chinensis HOM05D005082 ORTHO05D006474 6.1e-40 168.3 138 65.2
Haze_01956 Corylus avellana HOM05D005082 ORTHO05D006474 3.4e-38 162.5 189 52.9
CSS0018221 Camellia sinensis var. sinensis HOM05D005082 ORTHO05D006474 2.2e-37 159.8 95 81.1
SMO134G0063 Selaginella moellendorffii HOM05D005082 ORTHO05D006474 6.4e-37 158.3 187 46.5
Pp3c1_10010 Physcomitrium patens HOM05D005082 ORTHO05D006474 1.9e-36 156.8 189 43.9
CBR_g25940 Chara braunii HOM05D005082 ORTHO05D006474 4.6e-35 152.1 182 42.3
PGR142G3202 Punica granatum HOM05D005082 ORTHO05D006474 8.6e-34 147.9 99 72.7
PGR004G1860 Punica granatum HOM05D005082 ORTHO05D006474 1.9e-33 146.7 99 71.7
Cre07.g313700 Chlamydomonas reinhardtii HOM05D005082 ORTHO05D006474 8.0e-32 141.4 193 40.4
PRCOL_00001874 Prasinoderma coloniale HOM05D005082 ORTHO05D006474 4.6e-27 125.6 198 36.9
Sed0003916 Sechium edule HOM05D005082 ORTHO05D006474 8.1e-24 114.8 107 57.9
MCO11G616 Micromonas commoda HOM05D005082 ORTHO05D006474 9.9e-22 107.8 172 34.9
CSS0015047 Camellia sinensis var. sinensis HOM05D005082 ORTHO05D006474 3.2e-20 102.8 85 68.2
Aa31LG6G3290 Aethionema arabicum HOM05D005082 ORTHO05D006474 6.0e-19 98.6 70 72.9
HPP92_019666 Vanilla planifolia HOM05D005082 ORTHO05D006474 1.2e-11 74.3 169 34.3
Pp3c2_37890 Physcomitrium patens HOM05D005082 ORTHO05D006474 1.6e-11 73.9 197 29.4
QL04p064927 Quercus lobata HOM05D005082 ORTHO05D006474 6.2e-08 62.0 32 87.5
FAN04G1942 Fragaria x ananassa HOM05D005082 ORTHO05D006474 4.0e-07 59.3 106 34.9
FvH4_2g14910 Fragaria vesca HOM05D005082 ORTHO05D006474 1.5e-06 57.4 32 81.2
Atru.chr5.3580 Acer truncatum HOM05D005082 ORTHO05D006474 2.6e-06 56.6 32 71.9


User provided reference genes

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