Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A499G48 Lonicera japonica HOM05D001354 ORTHO05D002582 2.7e-31 137.9 63 100.0
Nitab4.5_0001271g0100 Nicotiana tabacum HOM05D001354 ORTHO05D002582 2.7e-07 58.2 64 46.9
Nitab4.5_0003157g0040 Nicotiana tabacum HOM05D001354 ORTHO05D002582 2.7e-07 58.2 64 46.9
FAN18G2562 Fragaria x ananassa HOM05D001354 ORTHO05D002582 4.6e-07 57.4 43 60.5
Atru.chr1.2894 Acer truncatum HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Atru.chr1.2899 Acer truncatum HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Actinidia01737 Actinidia chinensis HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Actinidia15753 Actinidia chinensis HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
ATR0691G124 Amborella trichopoda HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
ATR0751G012 Amborella trichopoda HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Aqoxy7G01239 Aquilegia oxysepala HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
arahy.Tifrunner.gnm1.ann1.5IPV2R Arachis hypogaea HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
arahy.Tifrunner.gnm1.ann1.CWCJ30 Arachis hypogaea HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
arahy.Tifrunner.gnm1.ann1.DTT4AE Arachis hypogaea HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
arahy.Tifrunner.gnm1.ann1.UV9SWK Arachis hypogaea HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
MSTRG.22753 Avicennia marina HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
EL10Ac9g21880 Beta vulgaris HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
CANSAT56G2642 Cannabis sativa HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
CAN.G47.21 Capsicum annuum HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Cpa.g.sc167.7 Carica papaya HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
CDE02G0107 Ceratophyllum demersum HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
CDE04G2225 Ceratophyllum demersum HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
AUR62011509 Chenopodium quinoa HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
AUR62016327 Chenopodium quinoa HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
ClCG07G012210 Citrullus lanatus HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Ciclev10025458m.g Citrus clementina HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Cc04_g04500 Coffea canephora HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
COL.COLO4_11914 Corchorus olitorius HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
MELO3C017841.2 Cucumis melo HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
CsaV3_4G001950 Cucumis sativus L. HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Dinv30617 Davidia involucrata HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Dinv38131 Davidia involucrata HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Duzib160G0508 Durio zibethinus HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Duzib192G0646 Durio zibethinus HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
ECA232G4844 Erigeron canadensis HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Eucgr.F03884 Eucalyptus grandis HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
FvH4_2g33430 Fragaria vesca HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
FvH4_5g33730 Fragaria vesca HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
FAN20G1566 Fragaria x ananassa HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
FAN24G0262 Fragaria x ananassa HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
FAN27G1035 Fragaria x ananassa HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Glyma.13G366500 Glycine max HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Glyma.15G006700 Glycine max HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Gohir.A10G073000 Gossypium hirsutum HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Gohir.D10G078000 Gossypium hirsutum HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Gorai.011G084700 Gossypium raimondii HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
HanXRQChr02g0033421 Helianthus annuus HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
HanXRQChr04g0097901 Helianthus annuus HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Hma1.2p1_0495F.1_g165670 Hydrangea macrophylla HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Lsat_1_v5_gn_1_34301 Lactuca sativa HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Lsat_1_v5_gn_4_87641 Lactuca sativa HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Lj5C74G15 Lonicera japonica HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Lj3g0022067 Lotus japonicus HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
MBI04_g36309_MAGBIO Magnolia biondii HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Manes.04G111700 Manihot esculenta HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Manes.11G058150 Manihot esculenta HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Nn2g12780 Nelumbo nucifera HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Nn3g20753 Nelumbo nucifera HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Oeu004217.1 Olea europaea HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Oeu004222.1 Olea europaea HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Oeu004223.1 Olea europaea HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Oeu018807.1 Olea europaea HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Peaxi162Scf01093g00218 Petunia axillaris HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Phvul.005G179000 Phaseolus vulgaris HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Phvul.010G156800 Phaseolus vulgaris HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Potri.001G253500 Populus trichocarpa HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Potri.016G112800 Populus trichocarpa HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Prupe.3G089600 Prunus persica HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
PGR031G3144 Punica granatum HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Rhsim08G0212200 Rhododendron simsii HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Rhsim12G0190500 Rhododendron simsii HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
RcHm_v2.0_Chr6g0309101 Rosa chinensis HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Sabra16G0108500 Salix brachista HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Hund06551 Selenicereus undatus HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Solyc12g042740.2 Solanum lycopersicum HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Sopen12g021920 Solanum pennellii HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
PGSC0003DMG400028629 Solanum tuberosum HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
Thecc.06G030200 Theobroma cacao HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
TWI12G1327 Tripterygium wilfordii HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
TWI18G0080 Tripterygium wilfordii HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
TAR624G0075 Trochodendron aralioides HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
unitig_744.g24450 Utricularia gibba HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
vmacro19006 Vaccinium macrocarpon HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
VMungo0331G0245 Vigna mungo HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
VMungo1080G0941 Vigna mungo HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
GSVIVG01017362001 Vitis vinifera HOM05D001354 ORTHO05D002582 1.0e-06 56.2 24 95.8
PGR004G2643 Punica granatum HOM05D001354 ORTHO05D002582 1.8e-06 55.5 26 88.5
Cfa001952 Carpinus fangiana HOM05D001354 ORTHO05D002582 2.3e-06 55.1 24 91.7
CiPaw.01G249200 Carya illinoinensis HOM05D001354 ORTHO05D002582 2.3e-06 55.1 24 91.7
CiPaw.02G157800 Carya illinoinensis HOM05D001354 ORTHO05D002582 2.3e-06 55.1 24 91.7
Haze_16573 Corylus avellana HOM05D001354 ORTHO05D002582 2.3e-06 55.1 24 91.7
Eucgr.C04171 Eucalyptus grandis HOM05D001354 ORTHO05D002582 2.3e-06 55.1 24 91.7
Eucgr.L02527 Eucalyptus grandis HOM05D001354 ORTHO05D002582 2.3e-06 55.1 24 91.7
Lj9C498T12 Lonicera japonica HOM05D001354 ORTHO05D002582 2.3e-06 55.1 24 91.7
QL05p030676 Quercus lobata HOM05D001354 ORTHO05D002582 2.3e-06 55.1 24 91.7
SGA_v2.0_scaffold37G14757 Striga asiatica HOM05D001354 ORTHO05D002582 2.3e-06 55.1 24 91.7
SGA_v2.0_scaffold5G02709 Striga asiatica HOM05D001354 ORTHO05D002582 2.3e-06 55.1 24 91.7
Aqoxy7G00828 Aquilegia oxysepala HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
MSTRG.11148 Avicennia marina HOM05D001354 ORTHO05D002582 3.0e-06 54.7 23 95.7
Ca_12524_v3 Cicer arietinum L. HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
DCAR_025520 Daucus carota HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
DCAR_028114 Daucus carota HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
Migut.H01871 Erythranthe guttata HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
Glyma.07G029200 Glycine max HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
Glyma.08G213600 Glycine max HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
Lsat_1_v5_gn_4_5341 Lactuca sativa HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
Medtr4g010050 Medicago truncatula HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
Nitab4.5_0008560g0030 Nicotiana tabacum HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
Psat7g257320 Pisum sativum HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
SHI12843 Sapria himalayana HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
Sc18g0005600 Simmondsia chinensis HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
TPR.G38698 Trifolium pratense HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
TAR636G2203 Trochodendron aralioides HOM05D001354 ORTHO05D002582 3.0e-06 54.7 24 91.7
CAN.G407.72 Capsicum annuum HOM05D001354 ORTHO05D002582 3.9e-06 54.3 24 91.7
ECA247G2927 Erigeron canadensis HOM05D001354 ORTHO05D002582 3.9e-06 54.3 24 91.7
Migut.I00754 Erythranthe guttata HOM05D001354 ORTHO05D002582 3.9e-06 54.3 24 91.7
FvH4_6g09610 Fragaria vesca HOM05D001354 ORTHO05D002582 3.9e-06 54.3 24 91.7
FAN14G1841 Fragaria x ananassa HOM05D001354 ORTHO05D002582 3.9e-06 54.3 24 91.7
Lj3g0007364 Lotus japonicus HOM05D001354 ORTHO05D002582 3.9e-06 54.3 24 91.7
Sed0001805 Sechium edule HOM05D001354 ORTHO05D002582 3.9e-06 54.3 24 91.7
Sed0014737 Sechium edule HOM05D001354 ORTHO05D002582 3.9e-06 54.3 24 91.7
Sed0015105 Sechium edule HOM05D001354 ORTHO05D002582 3.9e-06 54.3 24 91.7
Sed0019227 Sechium edule HOM05D001354 ORTHO05D002582 3.9e-06 54.3 24 91.7
Sed0027732 Sechium edule HOM05D001354 ORTHO05D002582 3.9e-06 54.3 24 91.7
vmacro16880 Vaccinium macrocarpon HOM05D001354 ORTHO05D002582 3.9e-06 54.3 24 91.7
CAN.G311.91 Capsicum annuum HOM05D001354 ORTHO05D002582 5.1e-06 53.9 60 48.3
MD17G1213700 Malus domestica HOM05D001354 ORTHO05D002582 5.1e-06 53.9 24 91.7
QL04p090752 Quercus lobata HOM05D001354 ORTHO05D002582 5.1e-06 53.9 24 87.5
QL09p016638 Quercus lobata HOM05D001354 ORTHO05D002582 5.1e-06 53.9 24 87.5
Sabra16G0154300 Salix brachista HOM05D001354 ORTHO05D002582 5.1e-06 53.9 24 91.7
Rhsim04G0099100 Rhododendron simsii HOM05D001354 ORTHO05D002582 8.8e-06 53.1 26 84.6
Solyc03g116810.4 Solanum lycopersicum HOM05D001354 ORTHO05D002582 8.8e-06 53.1 24 87.5
PGSC0003DMG400000625 Solanum tuberosum HOM05D001354 ORTHO05D002582 8.8e-06 53.1 24 87.5


User provided reference genes

Program Settings