Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A25T22 Lonicera japonica HOM05D002899 ORTHO05D003850 2.6e-206 721.8 373 100.0
Lj9C24T10 Lonicera japonica HOM05D002899 ORTHO05D003850 8.7e-194 680.2 397 90.2
Lj5P331T27 Lonicera japonica HOM05D002899 ORTHO05D003850 1.1e-164 583.6 391 80.8
Hma1.2p1_1059F.1_g253030 Hydrangea macrophylla HOM05D002899 ORTHO05D003850 1.5e-113 413.7 411 59.6
Oeu028990.1 Olea europaea HOM05D002899 ORTHO05D003850 3.4e-113 412.5 393 64.4
Actinidia08787 Actinidia chinensis HOM05D002899 ORTHO05D003850 4.9e-112 408.7 393 61.3
Dinv04696 Davidia involucrata HOM05D002899 ORTHO05D003850 2.4e-111 406.4 404 61.1
Duzib128G1532 Durio zibethinus HOM05D002899 ORTHO05D003850 7.0e-111 404.8 407 59.7
TAR633G0361 Trochodendron aralioides HOM05D002899 ORTHO05D003850 2.0e-110 403.3 389 61.7
Nn3g21896 Nelumbo nucifera HOM05D002899 ORTHO05D003850 6.6e-109 398.3 407 59.7
Cc05_g11170 Coffea canephora HOM05D002899 ORTHO05D003850 1.9e-108 396.7 400 60.5
Sopen10g001950 Solanum pennellii HOM05D002899 ORTHO05D003850 8.9e-106 387.9 400 58.8
Nitab4.5_0009225g0010 Nicotiana tabacum HOM05D002899 ORTHO05D003850 1.5e-105 387.1 397 59.4
Peaxi162Scf01026g00001 Petunia axillaris HOM05D002899 ORTHO05D003850 7.5e-105 384.8 398 59.5
CSS0044416 Camellia sinensis var. sinensis HOM05D002899 ORTHO05D003850 2.2e-104 383.3 420 58.3
Rhsim06G0232100 Rhododendron simsii HOM05D002899 ORTHO05D003850 6.4e-104 381.7 403 57.8
DCAR_022992 Daucus carota HOM05D002899 ORTHO05D003850 1.4e-103 380.6 396 59.1
PGSC0003DMG400014409 Solanum tuberosum HOM05D002899 ORTHO05D003850 1.4e-103 380.6 402 58.2
Sed0003802 Sechium edule HOM05D002899 ORTHO05D003850 2.4e-103 379.8 412 58.7
TAR375G0529 Trochodendron aralioides HOM05D002899 ORTHO05D003850 2.4e-103 379.8 389 59.1
ECA247G1085 Erigeron canadensis HOM05D002899 ORTHO05D003850 2.0e-102 376.7 398 60.3
MSTRG.22435 Avicennia marina HOM05D002899 ORTHO05D003850 4.6e-102 375.6 394 59.6
Sed0007587 Sechium edule HOM05D002899 ORTHO05D003850 3.0e-101 372.9 395 58.7
MSTRG.8559 Avicennia marina HOM05D002899 ORTHO05D003850 2.5e-100 369.8 394 58.6
HanXRQChr15g0463941 Helianthus annuus HOM05D002899 ORTHO05D003850 3.3e-100 369.4 398 58.5
Gohir.D11G234700 Gossypium hirsutum HOM05D002899 ORTHO05D003850 4.3e-100 369.0 404 56.2
Gorai.007G247300 Gossypium raimondii HOM05D002899 ORTHO05D003850 4.3e-100 369.0 404 56.2
Gohir.A11G221200 Gossypium hirsutum HOM05D002899 ORTHO05D003850 9.5e-100 367.9 404 56.2
ClCG02G007900 Citrullus lanatus HOM05D002899 ORTHO05D003850 1.2e-99 367.5 408 58.6
unitig_21.g20691 Utricularia gibba HOM05D002899 ORTHO05D003850 1.4e-98 364.0 393 57.8
Prupe.5G048700 Prunus persica HOM05D002899 ORTHO05D003850 5.2e-98 362.1 415 55.4
MELO3C024757.2 Cucumis melo HOM05D002899 ORTHO05D003850 6.8e-98 361.7 408 56.4
Eucgr.G00845 Eucalyptus grandis HOM05D002899 ORTHO05D003850 8.9e-98 361.3 404 56.7
SGA_v2.0_scaffold39G15236 Striga asiatica HOM05D002899 ORTHO05D003850 8.9e-98 361.3 398 55.5
CsaV3_2G035840 Cucumis sativus L. HOM05D002899 ORTHO05D003850 1.5e-97 360.5 413 55.2
MBI02_g25679_MAGBIO Magnolia biondii HOM05D002899 ORTHO05D003850 3.4e-97 359.4 400 56.2
MD08G1250100 Malus domestica HOM05D002899 ORTHO05D003850 5.8e-97 358.6 417 54.7
CiPaw.05G210800 Carya illinoinensis HOM05D002899 ORTHO05D003850 2.9e-96 356.3 396 56.6
Lju926C12T4 Lonicera japonica HOM05D002899 ORTHO05D003850 3.7e-96 355.9 386 57.3
Prupe.1G587200 Prunus persica HOM05D002899 ORTHO05D003850 1.4e-95 354.0 415 54.2
Actinidia27037 Actinidia chinensis HOM05D002899 ORTHO05D003850 1.9e-95 353.6 363 60.6
MD15G1445100 Malus domestica HOM05D002899 ORTHO05D003850 4.1e-95 352.4 418 54.3
Migut.F00929 Erythranthe guttata HOM05D002899 ORTHO05D003850 7.8e-94 348.2 392 55.4
Potri.013G076000 Populus trichocarpa HOM05D002899 ORTHO05D003850 7.8e-94 348.2 408 54.4
Manes.09G130600 Manihot esculenta HOM05D002899 ORTHO05D003850 6.6e-93 345.1 409 52.8
PGR142G0302 Punica granatum HOM05D002899 ORTHO05D003850 1.5e-92 344.0 399 55.1
Atru.chr12.1814 Acer truncatum HOM05D002899 ORTHO05D003850 1.9e-92 343.6 400 53.8
CDE05G1238 Ceratophyllum demersum HOM05D002899 ORTHO05D003850 1.2e-91 340.9 383 54.6
Lsat_1_v5_gn_9_37500 Lactuca sativa HOM05D002899 ORTHO05D003850 2.1e-91 340.1 405 54.8
Cfa016110 Carpinus fangiana HOM05D002899 ORTHO05D003850 6.2e-91 338.6 407 53.3
Phvul.004G082100 Phaseolus vulgaris HOM05D002899 ORTHO05D003850 8.1e-91 338.2 415 52.8
Glyma.02G073100 Glycine max HOM05D002899 ORTHO05D003850 3.1e-90 336.3 405 54.1
arahy.Tifrunner.gnm1.ann1.VWPR3S Arachis hypogaea HOM05D002899 ORTHO05D003850 7.6e-89 331.6 405 52.8
TWI38G1169 Tripterygium wilfordii HOM05D002899 ORTHO05D003850 2.2e-88 330.1 413 52.1
ATR1098G071 Amborella trichopoda HOM05D002899 ORTHO05D003850 1.4e-87 327.4 412 51.9
Haze_00347 Corylus avellana HOM05D002899 ORTHO05D003850 2.1e-86 323.6 406 51.0
SHI02598 Sapria himalayana HOM05D002899 ORTHO05D003850 1.3e-85 320.9 407 49.4
FvH4_5g27320 Fragaria vesca HOM05D002899 ORTHO05D003850 2.3e-85 320.1 418 50.0
RcHm_v2.0_Chr7g0218481 Rosa chinensis HOM05D002899 ORTHO05D003850 2.3e-85 320.1 418 49.3
Cpa.g.sc43.153 Carica papaya HOM05D002899 ORTHO05D003850 5.1e-85 318.9 419 50.4
Atru.chr6.914 Acer truncatum HOM05D002899 ORTHO05D003850 6.6e-85 318.5 412 49.5
SEGI_23967 Sequoiadendron giganteum HOM05D002899 ORTHO05D003850 3.3e-84 316.2 398 50.8
Dinv36250 Davidia involucrata HOM05D002899 ORTHO05D003850 1.6e-83 313.9 415 53.3
Glyma.16G154400 Glycine max HOM05D002899 ORTHO05D003850 3.6e-83 312.8 405 52.1
FAN18G3509 Fragaria x ananassa HOM05D002899 ORTHO05D003850 4.7e-83 312.4 418 49.3
arahy.Tifrunner.gnm1.ann1.T623PT Arachis hypogaea HOM05D002899 ORTHO05D003850 1.2e-81 307.8 401 50.4
arahy.Tifrunner.gnm1.ann1.2Q8IWK Arachis hypogaea HOM05D002899 ORTHO05D003850 2.0e-81 307.0 402 49.5
Sc11g0002190 Simmondsia chinensis HOM05D002899 ORTHO05D003850 7.6e-81 305.1 428 47.7
Solyc10g005990.4 Solanum lycopersicum HOM05D002899 ORTHO05D003850 7.6e-81 305.1 398 50.3
FAN04G0489 Fragaria x ananassa HOM05D002899 ORTHO05D003850 1.1e-79 301.2 432 46.1
Ciclev10030682m.g Citrus clementina HOM05D002899 ORTHO05D003850 1.4e-79 300.8 413 50.1
C08p44090 Brassica napus HOM05D002899 ORTHO05D003850 2.4e-79 300.1 394 50.5
COL.COLO4_33467 Corchorus olitorius HOM05D002899 ORTHO05D003850 3.2e-79 299.7 369 50.9
PSO339G6595 Papaver somniferum HOM05D002899 ORTHO05D003850 4.2e-79 299.3 398 48.7
FAN08G1317 Fragaria x ananassa HOM05D002899 ORTHO05D003850 7.1e-79 298.5 450 45.1
VMungo0464G0921 Vigna mungo HOM05D002899 ORTHO05D003850 1.2e-78 297.7 409 49.4
BcaC07g41444 Brassica carinata HOM05D002899 ORTHO05D003850 4.6e-78 295.8 394 50.5
A09p60630 Brassica napus HOM05D002899 ORTHO05D003850 4.6e-78 295.8 395 49.4
BraA09t41433Z Brassica rapa HOM05D002899 ORTHO05D003850 4.6e-78 295.8 398 49.7
Oeu027900.2 Olea europaea HOM05D002899 ORTHO05D003850 7.8e-78 295.0 357 54.3
BolC8t51957H Brassica oleracea HOM05D002899 ORTHO05D003850 1.3e-77 294.3 394 50.3
HPP92_017274 Vanilla planifolia HOM05D002899 ORTHO05D003850 3.9e-77 292.7 385 50.9
GSVIVG01024262001 Vitis vinifera HOM05D002899 ORTHO05D003850 5.1e-77 292.4 356 52.0
Sc06g0010130 Simmondsia chinensis HOM05D002899 ORTHO05D003850 3.3e-76 289.7 428 46.0
Aa31LG11G5630 Aethionema arabicum HOM05D002899 ORTHO05D003850 2.1e-75 287.0 400 48.5
Sp1g15190 Schrenkiella parvula HOM05D002899 ORTHO05D003850 4.8e-75 285.8 396 48.2
Lalb_Chr09g0328871 Lupinus albus HOM05D002899 ORTHO05D003850 6.2e-75 285.4 410 47.3
THA.LOC104805726 Tarenaya hassleriana HOM05D002899 ORTHO05D003850 8.1e-75 285.0 420 44.8
EL10Ac2g02592 Beta vulgaris HOM05D002899 ORTHO05D003850 4.0e-74 282.7 408 48.3
Lj5P331T31 Lonicera japonica HOM05D002899 ORTHO05D003850 5.3e-74 282.3 160 91.2
Ah.12g063970 Amaranthus hybridus HOM05D002899 ORTHO05D003850 9.0e-74 281.6 414 47.8
CARHR017600 Cardamine hirsuta HOM05D002899 ORTHO05D003850 1.5e-73 280.8 398 48.7
Mapoly0085s0035 Marchantia polymorpha HOM05D002899 ORTHO05D003850 2.6e-73 280.0 401 46.6
Sabra13G0065200 Salix brachista HOM05D002899 ORTHO05D003850 5.8e-73 278.9 402 48.0
Thhalv10006789m.g Eutrema salsugineum HOM05D002899 ORTHO05D003850 7.6e-73 278.5 398 47.0
Carub.0001s1679 Capsella rubella HOM05D002899 ORTHO05D003850 2.9e-72 276.6 401 46.4
AL1G29240 Arabidopsis lyrata HOM05D002899 ORTHO05D003850 3.8e-72 276.2 410 46.8
Rhsim03G0225400 Rhododendron simsii HOM05D002899 ORTHO05D003850 1.1e-71 274.6 398 48.2
AT1G17070 Arabidopsis thaliana HOM05D002899 ORTHO05D003850 1.9e-71 273.9 410 46.3
Lj1g0022689 Lotus japonicus HOM05D002899 ORTHO05D003850 1.9e-71 273.9 419 45.6
PSO384G0661 Papaver somniferum HOM05D002899 ORTHO05D003850 3.2e-71 273.1 401 46.6
AUR62024879 Chenopodium quinoa HOM05D002899 ORTHO05D003850 1.2e-70 271.2 395 48.6
AUR62030668 Chenopodium quinoa HOM05D002899 ORTHO05D003850 1.2e-70 271.2 407 47.7
THA.LOC104823791 Tarenaya hassleriana HOM05D002899 ORTHO05D003850 6.0e-70 268.9 417 43.2
Aqoxy2G00924 Aquilegia oxysepala HOM05D002899 ORTHO05D003850 1.1e-68 264.6 412 43.9
Ah.12g064150 Amaranthus hybridus HOM05D002899 ORTHO05D003850 6.2e-67 258.8 417 46.0
Medtr8g010350 Medicago truncatula HOM05D002899 ORTHO05D003850 1.8e-66 257.3 401 44.6
HanXRQChr10g0291501 Helianthus annuus HOM05D002899 ORTHO05D003850 5.3e-66 255.8 367 48.8
Lalb_Chr16g0385381 Lupinus albus HOM05D002899 ORTHO05D003850 6.9e-66 255.4 408 42.9
Pp3c22_1760 Physcomitrium patens HOM05D002899 ORTHO05D003850 6.9e-66 255.4 392 45.4
Ca_23166_v3 Cicer arietinum L. HOM05D002899 ORTHO05D003850 1.5e-65 254.2 409 44.7
Psat4g207720 Pisum sativum HOM05D002899 ORTHO05D003850 5.8e-65 252.3 414 42.5
Mapoly0121s0014 Marchantia polymorpha HOM05D002899 ORTHO05D003850 7.6e-65 251.9 391 45.3
Sabra19G0053900 Salix brachista HOM05D002899 ORTHO05D003850 1.3e-64 251.1 313 51.4
TPR.G26966 Trifolium pratense HOM05D002899 ORTHO05D003850 3.8e-64 249.6 391 45.3
CAN.G492.37 Capsicum annuum HOM05D002899 ORTHO05D003850 2.7e-62 243.4 321 53.6
Pp3c19_6430 Physcomitrium patens HOM05D002899 ORTHO05D003850 3.5e-62 243.0 395 44.8
Thecc.05G227100 Theobroma cacao HOM05D002899 ORTHO05D003850 4.8e-59 232.6 177 69.5
TPR.G27642 Trifolium pratense HOM05D002899 ORTHO05D003850 8.2e-59 231.9 399 42.9
AagrBONN_evm.TU.Sc2ySwM_340.341 Anthoceros agrestis HOM05D002899 ORTHO05D003850 5.5e-55 219.2 398 41.5
COL.COLO4_32217 Corchorus olitorius HOM05D002899 ORTHO05D003850 1.2e-54 218.0 177 64.4
Sc09g0008570 Simmondsia chinensis HOM05D002899 ORTHO05D003850 1.0e-53 214.9 404 40.6
Potri.019G043200 Populus trichocarpa HOM05D002899 ORTHO05D003850 7.4e-52 208.8 179 64.2
Aqoxy6G01664 Aquilegia oxysepala HOM05D002899 ORTHO05D003850 2.9e-48 196.8 310 45.5
Gorai.011G214400 Gossypium raimondii HOM05D002899 ORTHO05D003850 1.9e-47 194.1 262 50.4
BcaC05g25671 Brassica carinata HOM05D002899 ORTHO05D003850 1.6e-46 191.0 315 43.2
ECA247G0541 Erigeron canadensis HOM05D002899 ORTHO05D003850 1.8e-45 187.6 365 43.3
CBR_g50354 Chara braunii HOM05D002899 ORTHO05D003850 3.0e-45 186.8 432 36.8
Peaxi162Scf00017g01725 Petunia axillaris HOM05D002899 ORTHO05D003850 3.0e-45 186.8 169 63.9
Lsat_1_v5_gn_9_37520 Lactuca sativa HOM05D002899 ORTHO05D003850 6.7e-45 185.7 351 41.9
Eucgr.G00836 Eucalyptus grandis HOM05D002899 ORTHO05D003850 1.5e-44 184.5 368 40.5
Gohir.D10G191600 Gossypium hirsutum HOM05D002899 ORTHO05D003850 7.4e-44 182.2 150 64.7
BcaB02g06683 Brassica carinata HOM05D002899 ORTHO05D003850 2.2e-43 180.6 292 45.2
Sc09g0008520 Simmondsia chinensis HOM05D002899 ORTHO05D003850 3.7e-43 179.9 264 45.5
arahy.Tifrunner.gnm1.ann1.S0X35P Arachis hypogaea HOM05D002899 ORTHO05D003850 1.1e-42 178.3 177 56.5
Lj9P219T21 Lonicera japonica HOM05D002899 ORTHO05D003850 9.1e-42 175.3 105 88.6
AL4G40710 Arabidopsis lyrata HOM05D002899 ORTHO05D003850 1.5e-41 174.5 355 36.9
Os12g0615800 Oryza sativa ssp. japonica HOM05D002899 ORTHO05D003850 1.7e-40 171.0 403 35.7
Cc07_g20660 Coffea canephora HOM05D002899 ORTHO05D003850 2.2e-40 170.6 139 68.3
BcaC07g41394 Brassica carinata HOM05D002899 ORTHO05D003850 2.9e-40 170.2 364 38.7
AT2G42330 Arabidopsis thaliana HOM05D002899 ORTHO05D003850 2.0e-36 157.5 348 36.2
Cre07.g325713 Chlamydomonas reinhardtii HOM05D002899 ORTHO05D003850 1.7e-35 154.5 475 29.5
SMO165G0034 Selaginella moellendorffii HOM05D002899 ORTHO05D003850 2.4e-34 150.6 373 33.0
Zm00001eb135930 Zea mays HOM05D002899 ORTHO05D003850 3.1e-34 150.2 396 33.3
CARHR137380 Cardamine hirsuta HOM05D002899 ORTHO05D003850 2.6e-33 147.1 342 35.1
TPR.G6614 Trifolium pratense HOM05D002899 ORTHO05D003850 2.6e-33 147.1 225 45.3
TPR.G29541 Trifolium pratense HOM05D002899 ORTHO05D003850 1.1e-31 141.7 327 36.4
Eucgr.G00703 Eucalyptus grandis HOM05D002899 ORTHO05D003850 4.7e-30 136.3 102 71.6
TPR.G2005 Trifolium pratense HOM05D002899 ORTHO05D003850 1.4e-29 134.8 336 36.6
PGR031G2485 Punica granatum HOM05D002899 ORTHO05D003850 1.8e-29 134.4 175 50.3
BolC5t30252H Brassica oleracea HOM05D002899 ORTHO05D010192 3.8e-24 116.7 202 40.6
Manes.09G098002 Manihot esculenta HOM05D002899 ORTHO05D003850 3.0e-21 107.1 70 78.6
Actinidia27038 Actinidia chinensis HOM05D002899 ORTHO05D003850 2.0e-20 104.4 64 84.4
QL03p062784 Quercus lobata HOM05D002899 ORTHO05D003850 5.7e-20 102.8 170 41.8
QL03p066723 Quercus lobata HOM05D002899 ORTHO05D003850 5.7e-20 102.8 170 41.8
C05p15440 Brassica napus HOM05D002899 ORTHO05D003850 7.5e-20 102.4 217 35.0
FAN26G2125 Fragaria x ananassa HOM05D002899 ORTHO05D022703 8.2e-19 99.0 109 52.3
DCAR_009599 Daucus carota HOM05D002899 ORTHO05D003850 3.1e-18 97.1 79 67.1
FAN28G1870 Fragaria x ananassa HOM05D002899 ORTHO05D022703 1.6e-17 94.7 94 54.3
COL.COLO4_32216 Corchorus olitorius HOM05D002899 ORTHO05D025163 2.2e-16 90.9 73 65.8
MCO06G176 Micromonas commoda HOM05D002899 ORTHO05D003850 1.9e-15 87.8 211 32.2
Medtr7g070290 Medicago truncatula HOM05D002899 ORTHO05D003850 2.6e-12 77.4 235 32.3
QL03p062749 Quercus lobata HOM05D002899 ORTHO05D003850 1.7e-11 74.7 287 32.4
Sc09g0008530 Simmondsia chinensis HOM05D002899 ORTHO05D003850 1.1e-10 72.0 52 69.2
FvH4_4g03135 Fragaria vesca HOM05D002899 ORTHO05D025163 3.5e-09 67.0 83 48.2
RcHm_v2.0_Chr6g0293811 Rosa chinensis HOM05D002899 ORTHO05D010192 3.5e-09 67.0 163 32.5
Medtr7g070300 Medicago truncatula HOM05D002899 ORTHO05D010192 5.9e-09 66.2 198 34.3
FAN14G1151 Fragaria x ananassa HOM05D002899 ORTHO05D025163 7.2e-07 59.3 75 54.7
CDE02G4151 Ceratophyllum demersum HOM05D000614 ORTHO05D000463 1.2e-06 58.5 92 42.4
FvH4_2g25582 Fragaria vesca HOM05D002899 ORTHO05D010192 2.1e-06 57.8 119 38.7
FAN14G1119 Fragaria x ananassa HOM05D002899 ORTHO05D025163 2.1e-06 57.8 52 61.5
AUR62014872 Chenopodium quinoa HOM05D002899 ORTHO05D003850 2.8e-06 57.4 379 25.3


User provided reference genes

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