Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P608T25 Lonicera japonica HOM05D003624 ORTHO05D004188 2.0e-53 212.2 110 100.0
Lj2C36T16 Lonicera japonica HOM05D003624 ORTHO05D004188 2.3e-25 119.0 74 82.4
Oeu048253.2 Olea europaea HOM05D003624 ORTHO05D004188 4.7e-15 84.7 77 59.7
Nn3g21232 Nelumbo nucifera HOM05D003624 ORTHO05D004188 1.1e-14 83.6 96 50.0
Hma1.2p1_0493F.1_g164850 Hydrangea macrophylla HOM05D003624 ORTHO05D004188 1.8e-14 82.8 77 58.4
Rhsim05G0153700 Rhododendron simsii HOM05D003624 ORTHO05D004188 9.0e-14 80.5 86 58.1
Dinv27204 Davidia involucrata HOM05D003624 ORTHO05D004188 1.5e-13 79.7 67 67.2
Lj8P413T16 Lonicera japonica HOM05D003624 ORTHO05D004188 2.6e-13 79.0 74 60.8
Aqoxy6G02821 Aquilegia oxysepala HOM05D003624 ORTHO05D004188 4.4e-13 78.2 93 47.3
Sc10g0001520 Simmondsia chinensis HOM05D003624 ORTHO05D004188 4.4e-13 78.2 98 49.0
TAR636G1411 Trochodendron aralioides HOM05D003624 ORTHO05D004188 4.4e-13 78.2 96 45.8
Rhsim05G0154000 Rhododendron simsii HOM05D003624 ORTHO05D004188 5.8e-13 77.8 86 58.1
HanXRQChr08g0234751 Helianthus annuus HOM05D003624 ORTHO05D004188 7.6e-13 77.4 74 58.1
Peaxi162Scf00001g00045 Petunia axillaris HOM05D003624 ORTHO05D004188 7.6e-13 77.4 91 50.5
Rhsim03G0131100 Rhododendron simsii HOM05D003624 ORTHO05D004188 1.3e-12 76.6 82 59.8
CDE04G0801 Ceratophyllum demersum HOM05D003624 ORTHO05D004188 1.7e-12 76.3 91 48.4
Duzib114G1042 Durio zibethinus HOM05D003624 ORTHO05D004188 1.7e-12 76.3 74 52.7
Nitab4.5_0000578g0060 Nicotiana tabacum HOM05D003624 ORTHO05D004188 1.7e-12 76.3 97 46.4
Nn6g34375 Nelumbo nucifera HOM05D003624 ORTHO05D004188 2.2e-12 75.9 52 73.1
PSO384G3632 Papaver somniferum HOM05D003624 ORTHO05D004188 2.9e-12 75.5 89 51.7
Peaxi162Scf00015g01215 Petunia axillaris HOM05D003624 ORTHO05D004188 3.8e-12 75.1 91 49.5
Peaxi162Scf00015g10126 Petunia axillaris HOM05D003624 ORTHO05D004188 3.8e-12 75.1 91 49.5
Peaxi162Scf00271g00059 Petunia axillaris HOM05D003624 ORTHO05D004188 3.8e-12 75.1 91 49.5
Aqoxy2G03154 Aquilegia oxysepala HOM05D003624 ORTHO05D004188 4.9e-12 74.7 93 45.2
ECA232G3640 Erigeron canadensis HOM05D003624 ORTHO05D004188 4.9e-12 74.7 77 54.5
Nitab4.5_0001992g0010 Nicotiana tabacum HOM05D003624 ORTHO05D004188 8.4e-12 73.9 88 48.9
Atru.chr4.2829 Acer truncatum HOM05D003624 ORTHO05D004188 1.1e-11 73.6 81 51.9
CDE07G1603 Ceratophyllum demersum HOM05D003624 ORTHO05D004188 1.1e-11 73.6 89 47.2
MBI12_g10423_MAGBIO Magnolia biondii HOM05D003624 ORTHO05D004188 1.1e-11 73.6 88 55.7
Lsat_1_v5_gn_3_22041 Lactuca sativa HOM05D003624 ORTHO05D004188 1.4e-11 73.2 90 52.2
Gohir.A10G218400 Gossypium hirsutum HOM05D003624 ORTHO05D004188 2.4e-11 72.4 74 55.4
CAN.G862.53 Capsicum annuum HOM05D003624 ORTHO05D004188 3.2e-11 72.0 66 60.6
Gohir.D10G228000 Gossypium hirsutum HOM05D003624 ORTHO05D004188 3.2e-11 72.0 74 55.4
Gorai.011G260400 Gossypium raimondii HOM05D003624 ORTHO05D004188 3.2e-11 72.0 74 55.4
DCAR_001936 Daucus carota HOM05D003624 ORTHO05D004188 4.2e-11 71.6 78 56.4
PSO339G0082 Papaver somniferum HOM05D003624 ORTHO05D004188 4.2e-11 71.6 89 49.4
Potri.010G204900 Populus trichocarpa HOM05D003624 ORTHO05D004188 4.2e-11 71.6 66 63.6
Cc04_g09670 Coffea canephora HOM05D003624 ORTHO05D004188 7.1e-11 70.9 96 43.8
Manes.07G115700 Manihot esculenta HOM05D003624 ORTHO05D004188 7.1e-11 70.9 65 56.9
Aa31LG10G790 Aethionema arabicum HOM05D003624 ORTHO05D004188 9.3e-11 70.5 77 54.5
PGR142G3002 Punica granatum HOM05D003624 ORTHO05D004188 9.3e-11 70.5 96 45.8
AT1G55460 Arabidopsis thaliana HOM05D003624 ORTHO05D004188 1.2e-10 70.1 78 55.1
ECA247G0176 Erigeron canadensis HOM05D003624 ORTHO05D004188 1.2e-10 70.1 77 51.9
Prupe.1G588200 Prunus persica HOM05D003624 ORTHO05D004188 1.2e-10 70.1 74 51.4
Prupe.2G234600 Prunus persica HOM05D003624 ORTHO05D004188 1.2e-10 70.1 74 51.4
Ciclev10005088m.g Citrus clementina HOM05D003624 ORTHO05D004188 1.6e-10 69.7 100 45.0
Nitab4.5_0006489g0020 Nicotiana tabacum HOM05D003624 ORTHO05D004188 1.6e-10 69.7 91 46.2
Phvul.008G264800 Phaseolus vulgaris HOM05D003624 ORTHO05D004188 1.6e-10 69.7 90 46.7
Cpa.g.sc1.400 Carica papaya HOM05D003624 ORTHO05D004188 2.1e-10 69.3 67 56.7
Cc07_g19190 Coffea canephora HOM05D003624 ORTHO05D004188 2.1e-10 69.3 96 43.8
Potri.008G055300 Populus trichocarpa HOM05D003624 ORTHO05D004188 3.5e-10 68.6 65 55.4
vmacro17110 Vaccinium macrocarpon HOM05D003624 ORTHO05D004188 3.5e-10 68.6 78 59.0
AL1G63460 Arabidopsis lyrata HOM05D003624 ORTHO05D004188 6.0e-10 67.8 69 58.0
CSS0018661 Camellia sinensis var. sinensis HOM05D003624 ORTHO05D004188 6.0e-10 67.8 82 51.2
CANSAT54G1653 Cannabis sativa HOM05D003624 ORTHO05D004188 6.0e-10 67.8 89 47.2
Carub.0001s4395 Capsella rubella HOM05D003624 ORTHO05D004188 6.0e-10 67.8 69 58.0
Sp1g41070 Schrenkiella parvula HOM05D003624 ORTHO05D004188 6.0e-10 67.8 77 51.9
Phvul.003G195200 Phaseolus vulgaris HOM05D003624 ORTHO05D004188 7.8e-10 67.4 90 45.6
unitig_749.g13772 Utricularia gibba HOM05D003624 ORTHO05D004188 1.0e-09 67.0 78 48.7
VMungo0647G0302 Vigna mungo HOM05D003624 ORTHO05D004188 1.0e-09 67.0 67 52.2
MD01G1133500 Malus domestica HOM05D003624 ORTHO05D004188 1.3e-09 66.6 72 54.2
Os03g0570300 Oryza sativa ssp. japonica HOM05D003624 ORTHO05D004188 1.3e-09 66.6 84 48.8
AL185U10020 Arabidopsis lyrata HOM05D003624 ORTHO05D004188 1.7e-09 66.2 69 56.5
Ah.16g102270 Amaranthus hybridus HOM05D003624 ORTHO05D004188 2.3e-09 65.9 76 52.6
Duzib106G0342 Durio zibethinus HOM05D003624 ORTHO05D004188 2.3e-09 65.9 51 66.7
Medtr5g092130 Medicago truncatula HOM05D003624 ORTHO05D004188 2.3e-09 65.9 91 42.9
Prupe.4G141300 Prunus persica HOM05D003624 ORTHO05D004188 2.3e-09 65.9 74 51.4
EL10Ac2g04634 Beta vulgaris HOM05D003624 ORTHO05D004188 3.0e-09 65.5 81 48.1
Lalb_Chr03g0040441 Lupinus albus HOM05D003624 ORTHO05D004188 3.0e-09 65.5 61 57.4
CARHR218910 Cardamine hirsuta HOM05D003624 ORTHO05D004188 3.9e-09 65.1 98 40.8
PGSC0003DMG400023427 Solanum tuberosum HOM05D003624 ORTHO05D004188 3.9e-09 65.1 73 49.3
HPP92_019187 Vanilla planifolia HOM05D003624 ORTHO05D004188 3.9e-09 65.1 77 49.4
ClCG01G013570 Citrullus lanatus HOM05D003624 ORTHO05D004188 5.1e-09 64.7 98 43.9
Thhalv10011527m.g Eutrema salsugineum HOM05D003624 ORTHO05D004188 5.1e-09 64.7 78 50.0
Solyc05g054500.1 Solanum lycopersicum HOM05D003624 ORTHO05D004188 5.1e-09 64.7 64 54.7
Ca_06309_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 6.6e-09 64.3 88 42.0
FAN01G2477 Fragaria x ananassa HOM05D003624 ORTHO05D004188 6.6e-09 64.3 67 53.7
MELO3C014877.2 Cucumis melo HOM05D003624 ORTHO05D004188 8.7e-09 63.9 99 41.4
Sopen05g032980 Solanum pennellii HOM05D003624 ORTHO05D004188 8.7e-09 63.9 64 54.7
Thecc.10G043100 Theobroma cacao HOM05D003624 ORTHO05D004188 8.7e-09 63.9 46 69.6
Zm00001eb232160 Zea mays HOM05D003624 ORTHO05D004188 1.1e-08 63.5 72 51.4
Ca_06298_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 1.9e-08 62.8 88 39.8
Migut.B01491 Erythranthe guttata HOM05D003624 ORTHO05D004188 1.9e-08 62.8 75 46.7
Psat2g013120 Pisum sativum HOM05D003624 ORTHO05D004188 1.9e-08 62.8 89 43.8
CARHR045130 Cardamine hirsuta HOM05D003624 ORTHO05D004188 2.5e-08 62.4 79 48.1
SEGI_37535 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 2.5e-08 62.4 51 62.7
CsaV3_3G027090 Cucumis sativus L. HOM05D003624 ORTHO05D004188 4.3e-08 61.6 99 40.4
Lalb_Chr04g0248651 Lupinus albus HOM05D003624 ORTHO05D004188 4.3e-08 61.6 61 54.1
ClCG05G013440 Citrullus lanatus HOM05D003624 ORTHO05D004188 5.6e-08 61.2 85 44.7
LjContig00310g0027848 Lotus japonicus HOM05D003624 ORTHO05D004188 5.6e-08 61.2 63 52.4
Atru.chr11.11 Acer truncatum HOM05D003624 ORTHO05D004188 7.3e-08 60.8 66 53.0
SMO358G0194 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 7.3e-08 60.8 91 44.0
CiPaw.01G286800 Carya illinoinensis HOM05D003624 ORTHO05D004188 1.3e-07 60.1 91 45.1
DCAR_027848 Daucus carota HOM05D003624 ORTHO05D004188 1.3e-07 60.1 65 56.9
RcHm_v2.0_Chr2g0124981 Rosa chinensis HOM05D003624 ORTHO05D004188 1.3e-07 60.1 65 55.4
ATR0691G007 Amborella trichopoda HOM05D003624 ORTHO05D004188 1.6e-07 59.7 87 47.1
Lj8P417T12 Lonicera japonica HOM05D003624 ORTHO05D004188 2.1e-07 59.3 32 90.6
Nitab4.5_0004476g0070 Nicotiana tabacum HOM05D003624 ORTHO05D004188 2.1e-07 59.3 90 42.2
Zm00001eb208070 Zea mays HOM05D003624 ORTHO05D004188 2.1e-07 59.3 60 55.0
Sed0019448 Sechium edule HOM05D003624 ORTHO05D004188 2.8e-07 58.9 90 42.2
Haze_15559 Corylus avellana HOM05D003624 ORTHO05D004188 4.8e-07 58.2 65 50.8
AUR62031721 Chenopodium quinoa HOM05D003624 ORTHO05D004188 6.2e-07 57.8 80 43.8
Mapoly0087s0013 Marchantia polymorpha HOM05D003624 ORTHO05D004188 6.2e-07 57.8 73 45.2
QL06p008449 Quercus lobata HOM05D003624 ORTHO05D004188 6.2e-07 57.8 82 43.9
SMO142G0061 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 6.2e-07 57.8 50 60.0
AUR62032608 Chenopodium quinoa HOM05D003624 ORTHO05D004188 8.1e-07 57.4 79 44.3
MD07G1197800 Malus domestica HOM05D003624 ORTHO05D004188 8.1e-07 57.4 68 48.5
AT5G51795 Arabidopsis thaliana HOM05D003624 ORTHO05D004188 1.8e-06 56.2 59 55.9
Prupe.6G266400 Prunus persica HOM05D003624 ORTHO05D004188 1.8e-06 56.2 43 65.1
AUR62001070 Chenopodium quinoa HOM05D003624 ORTHO05D004188 2.4e-06 55.8 80 42.5
FAN10G3681 Fragaria x ananassa HOM05D003624 ORTHO05D004188 3.1e-06 55.5 45 57.8
AagrBONN_evm.TU.Sc2ySwM_368.2590 Anthoceros agrestis HOM05D003624 ORTHO05D004188 6.9e-06 54.3 91 44.0
arahy.Tifrunner.gnm1.ann1.00HL0A Arachis hypogaea HOM05D004850 ORTHO05D004353 6.9e-06 54.3 61 45.9
GSVIVG01008269001 Vitis vinifera HOM05D003624 ORTHO05D004188 9.0e-06 53.9 66 47.0


User provided reference genes

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