Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P413T16 Lonicera japonica HOM05D003624 ORTHO05D004188 3.0e-154 548.5 281 100.0
Lj2C36T16 Lonicera japonica HOM05D003624 ORTHO05D004188 5.4e-132 474.6 342 76.9
Dinv27204 Davidia involucrata HOM05D003624 ORTHO05D004188 1.8e-106 389.8 342 64.9
Rhsim05G0153700 Rhododendron simsii HOM05D003624 ORTHO05D004188 3.0e-106 389.0 338 66.6
Rhsim03G0131100 Rhododendron simsii HOM05D003624 ORTHO05D004188 5.1e-106 388.3 338 66.0
Nitab4.5_0001992g0010 Nicotiana tabacum HOM05D003624 ORTHO05D004188 1.9e-105 386.3 348 62.1
Nitab4.5_0006489g0020 Nicotiana tabacum HOM05D003624 ORTHO05D004188 4.3e-105 385.2 347 62.5
Nn6g34375 Nelumbo nucifera HOM05D003624 ORTHO05D004188 2.8e-104 382.5 332 64.2
Cc07_g19190 Coffea canephora HOM05D003624 ORTHO05D004188 1.4e-103 380.2 339 62.8
Cc04_g09670 Coffea canephora HOM05D003624 ORTHO05D004188 2.4e-103 379.4 339 63.4
Peaxi162Scf00001g00045 Petunia axillaris HOM05D003624 ORTHO05D004188 2.4e-103 379.4 347 61.4
Peaxi162Scf00015g10126 Petunia axillaris HOM05D003624 ORTHO05D004188 4.1e-103 378.6 347 61.1
CSS0018661 Camellia sinensis var. sinensis HOM05D003624 ORTHO05D004188 5.3e-103 378.3 342 62.6
TAR636G1411 Trochodendron aralioides HOM05D003624 ORTHO05D004188 3.4e-102 375.6 344 62.8
Lsat_1_v5_gn_3_22041 Lactuca sativa HOM05D003624 ORTHO05D004188 5.9e-102 374.8 338 63.9
Hma1.2p1_0493F.1_g164850 Hydrangea macrophylla HOM05D003624 ORTHO05D004188 2.2e-101 372.9 344 62.5
vmacro17110 Vaccinium macrocarpon HOM05D003624 ORTHO05D004188 2.9e-101 372.5 339 64.9
HanXRQChr08g0234751 Helianthus annuus HOM05D003624 ORTHO05D004188 4.2e-100 368.6 340 62.6
Sc10g0001520 Simmondsia chinensis HOM05D003624 ORTHO05D004188 1.2e-99 367.1 342 59.6
CANSAT54G1653 Cannabis sativa HOM05D003624 ORTHO05D004188 1.8e-98 363.2 342 61.1
Oeu048253.2 Olea europaea HOM05D003624 ORTHO05D004188 1.8e-98 363.2 350 60.6
DCAR_001936 Daucus carota HOM05D003624 ORTHO05D004188 2.3e-98 362.8 342 59.9
Eucgr.C04375 Eucalyptus grandis HOM05D003624 ORTHO05D004188 1.5e-97 360.1 349 58.2
PGR142G3002 Punica granatum HOM05D003624 ORTHO05D004188 1.5e-97 360.1 338 60.9
AT5G51795 Arabidopsis thaliana HOM05D003624 ORTHO05D004188 4.4e-97 358.6 281 66.2
ClCG01G013570 Citrullus lanatus HOM05D003624 ORTHO05D004188 7.4e-97 357.8 346 58.7
PSO384G3632 Papaver somniferum HOM05D003624 ORTHO05D004188 9.7e-97 357.5 346 59.5
ECA247G0176 Erigeron canadensis HOM05D003624 ORTHO05D004188 1.3e-96 357.1 339 60.2
ECA232G3640 Erigeron canadensis HOM05D003624 ORTHO05D004188 2.8e-96 355.9 343 59.8
MBI12_g10423_MAGBIO Magnolia biondii HOM05D003624 ORTHO05D004188 1.1e-95 354.0 341 60.1
CDE04G0801 Ceratophyllum demersum HOM05D003624 ORTHO05D004188 1.4e-95 353.6 342 58.5
ClCG05G013440 Citrullus lanatus HOM05D003624 ORTHO05D004188 1.4e-95 353.6 346 58.4
PSO339G0082 Papaver somniferum HOM05D003624 ORTHO05D004188 1.8e-95 353.2 346 59.0
MELO3C014877.2 Cucumis melo HOM05D003624 ORTHO05D004188 2.4e-95 352.8 347 58.2
CsaV3_3G027090 Cucumis sativus L. HOM05D003624 ORTHO05D004188 2.4e-95 352.8 347 57.9
Rhsim05G0154000 Rhododendron simsii HOM05D003624 ORTHO05D004188 5.3e-95 351.7 300 67.3
Prupe.2G234600 Prunus persica HOM05D003624 ORTHO05D004188 1.2e-94 350.5 342 59.6
Aqoxy2G03154 Aquilegia oxysepala HOM05D003624 ORTHO05D004188 7.7e-94 347.8 347 57.9
CAN.G862.53 Capsicum annuum HOM05D003624 ORTHO05D004188 1.0e-93 347.4 344 56.7
Duzib114G1042 Durio zibethinus HOM05D003624 ORTHO05D004188 2.2e-93 346.3 336 57.4
Prupe.4G141300 Prunus persica HOM05D003624 ORTHO05D004188 5.0e-93 345.1 343 59.5
Gohir.D10G228000 Gossypium hirsutum HOM05D003624 ORTHO05D004188 6.5e-93 344.7 342 56.7
Gorai.011G260400 Gossypium raimondii HOM05D003624 ORTHO05D004188 6.5e-93 344.7 342 56.7
CSS0014624 Camellia sinensis var. sinensis HOM05D003624 ORTHO05D004188 1.1e-92 344.0 334 60.8
Sed0019448 Sechium edule HOM05D003624 ORTHO05D004188 1.4e-92 343.6 348 56.9
Gohir.A10G218400 Gossypium hirsutum HOM05D003624 ORTHO05D004188 1.9e-92 343.2 342 56.4
Prupe.6G266400 Prunus persica HOM05D003624 ORTHO05D004188 4.2e-92 342.0 333 59.8
PGSC0003DMG400023427 Solanum tuberosum HOM05D003624 ORTHO05D004188 9.4e-92 340.9 345 56.2
Peaxi162Scf00271g00059 Petunia axillaris HOM05D003624 ORTHO05D004188 3.6e-91 339.0 322 60.6
Cpa.g.sc1.400 Carica papaya HOM05D003624 ORTHO05D004188 4.7e-91 338.6 349 57.9
Nn3g21232 Nelumbo nucifera HOM05D003624 ORTHO05D004188 4.7e-91 338.6 318 61.0
Migut.B01491 Erythranthe guttata HOM05D003624 ORTHO05D004188 1.0e-90 337.4 346 54.3
Ah.16g102270 Amaranthus hybridus HOM05D003624 ORTHO05D004188 1.8e-90 336.7 344 56.4
CiPaw.01G286800 Carya illinoinensis HOM05D003624 ORTHO05D004188 1.8e-90 336.7 337 59.3
Peaxi162Scf00015g01215 Petunia axillaris HOM05D003624 ORTHO05D004188 3.0e-90 335.9 322 60.2
Manes.07G115700 Manihot esculenta HOM05D003624 ORTHO05D004188 5.2e-90 335.1 348 56.0
Aa31LG10G790 Aethionema arabicum HOM05D003624 ORTHO05D004188 8.8e-90 334.3 359 54.9
AUR62031721 Chenopodium quinoa HOM05D003624 ORTHO05D004188 8.8e-90 334.3 347 54.2
AT1G55460 Arabidopsis thaliana HOM05D003624 ORTHO05D004188 1.7e-88 330.1 361 54.0
RcHm_v2.0_Chr1g0367021 Rosa chinensis HOM05D003624 ORTHO05D004188 3.7e-88 328.9 344 55.5
Carub.0001s4395 Capsella rubella HOM05D003624 ORTHO05D004188 4.8e-88 328.6 360 53.3
EL10Ac2g04634 Beta vulgaris HOM05D003624 ORTHO05D004188 8.2e-88 327.8 347 54.8
unitig_749.g13772 Utricularia gibba HOM05D003624 ORTHO05D004188 8.2e-88 327.8 343 55.4
Duzib106G0342 Durio zibethinus HOM05D003624 ORTHO05D004188 1.1e-87 327.4 340 57.4
Potri.010G204900 Populus trichocarpa HOM05D003624 ORTHO05D004188 1.4e-87 327.0 350 56.0
CARHR045130 Cardamine hirsuta HOM05D003624 ORTHO05D004188 2.4e-87 326.2 359 53.5
Solyc05g054500.1 Solanum lycopersicum HOM05D003624 ORTHO05D004188 3.1e-87 325.9 345 53.9
Sopen05g032980 Solanum pennellii HOM05D003624 ORTHO05D004188 3.1e-87 325.9 345 53.9
Potri.008G055300 Populus trichocarpa HOM05D003624 ORTHO05D004188 4.1e-87 325.5 346 56.4
Atru.chr4.2829 Acer truncatum HOM05D003624 ORTHO05D004188 5.3e-87 325.1 346 54.0
AL185U10020 Arabidopsis lyrata HOM05D003624 ORTHO05D004188 7.0e-87 324.7 332 56.3
Psat2g013120 Pisum sativum HOM05D003624 ORTHO05D004188 7.0e-87 324.7 345 53.9
AUR62032608 Chenopodium quinoa HOM05D003624 ORTHO05D004188 1.2e-86 323.9 348 53.4
ATR0691G007 Amborella trichopoda HOM05D003624 ORTHO05D004188 3.5e-86 322.4 335 55.5
FvH4_7g22390 Fragaria vesca HOM05D003624 ORTHO05D004188 2.9e-85 319.3 342 54.4
FAN06G1965 Fragaria x ananassa HOM05D003624 ORTHO05D004188 2.9e-85 319.3 342 54.4
FAN06G4942 Fragaria x ananassa HOM05D003624 ORTHO05D004188 2.9e-85 319.3 342 54.4
Lalb_Chr03g0040441 Lupinus albus HOM05D003624 ORTHO05D004188 2.9e-85 319.3 348 54.6
Sp1g41070 Schrenkiella parvula HOM05D003624 ORTHO05D004188 2.9e-85 319.3 363 52.3
Ciclev10005088m.g Citrus clementina HOM05D003624 ORTHO05D004188 5.0e-85 318.5 355 53.5
Haze_15559 Corylus avellana HOM05D003624 ORTHO05D004188 6.5e-85 318.2 335 54.9
AL1G63460 Arabidopsis lyrata HOM05D003624 ORTHO05D004188 1.1e-84 317.4 359 52.9
Thecc.10G043100 Theobroma cacao HOM05D003624 ORTHO05D004188 1.5e-84 317.0 339 56.0
Phvul.003G195200 Phaseolus vulgaris HOM05D003624 ORTHO05D004188 1.9e-84 316.6 346 53.8
QL06p008449 Quercus lobata HOM05D003624 ORTHO05D004188 3.2e-84 315.8 336 56.5
Thhalv10011527m.g Eutrema salsugineum HOM05D003624 ORTHO05D004188 4.2e-84 315.5 361 51.8
Mapoly0087s0013 Marchantia polymorpha HOM05D003624 ORTHO05D004188 4.2e-84 315.5 355 51.8
Nitab4.5_0000578g0060 Nicotiana tabacum HOM05D003624 ORTHO05D004188 4.2e-84 315.5 325 56.6
QL09p007395 Quercus lobata HOM05D003624 ORTHO05D004188 5.5e-84 315.1 340 55.9
QL93p0214_0025 Quercus lobata HOM05D003624 ORTHO05D004188 5.5e-84 315.1 340 55.9
HPP92_019187 Vanilla planifolia HOM05D003624 ORTHO05D004188 7.2e-84 314.7 356 51.4
Ca_06309_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 1.6e-83 313.5 345 53.0
Phvul.008G264800 Phaseolus vulgaris HOM05D003624 ORTHO05D004188 2.1e-83 313.2 345 54.2
VMungo0647G0302 Vigna mungo HOM05D003624 ORTHO05D004188 2.1e-83 313.2 348 52.9
Lalb_Chr04g0248651 Lupinus albus HOM05D003624 ORTHO05D004188 2.7e-83 312.8 348 53.4
Lj3g0027074 Lotus japonicus HOM05D003624 ORTHO05D004188 3.6e-83 312.4 342 55.0
MD01G1133500 Malus domestica HOM05D003624 ORTHO05D004188 3.0e-82 309.3 325 57.2
CDE07G1603 Ceratophyllum demersum HOM05D003624 ORTHO05D004188 5.2e-82 308.5 315 57.1
FAN10G3681 Fragaria x ananassa HOM05D003624 ORTHO05D004188 8.8e-82 307.8 327 54.7
Glyma.14G026000 Glycine max HOM05D003624 ORTHO05D004188 5.7e-81 305.1 345 53.0
TPR.G29126 Trifolium pratense HOM05D003624 ORTHO05D004188 5.7e-81 305.1 344 52.6
Sabra08G0039900 Salix brachista HOM05D003624 ORTHO05D004188 9.7e-81 304.3 346 54.0
TWI60G1571 Tripterygium wilfordii HOM05D003624 ORTHO05D004188 3.7e-80 302.4 343 53.1
Aqoxy6G02821 Aquilegia oxysepala HOM05D003624 ORTHO05D004188 6.3e-80 301.6 346 52.6
Glyma.02G288800 Glycine max HOM05D003624 ORTHO05D004188 8.2e-80 301.2 344 52.0
Lj3g0001422 Lotus japonicus HOM05D003624 ORTHO05D004188 8.2e-80 301.2 342 52.6
Medtr5g092130 Medicago truncatula HOM05D003624 ORTHO05D004188 1.4e-79 300.4 343 51.6
FAN01G2477 Fragaria x ananassa HOM05D003624 ORTHO05D004188 5.3e-79 298.5 327 53.5
arahy.Tifrunner.gnm1.ann1.2R0TK7 Arachis hypogaea HOM05D003624 ORTHO05D004188 5.9e-78 295.0 347 50.7
THA.LOC104815670 Tarenaya hassleriana HOM05D003624 ORTHO05D004188 1.0e-77 294.3 360 51.7
FAN03G2437 Fragaria x ananassa HOM05D003624 ORTHO05D004188 2.9e-77 292.7 342 51.5
Zm00001eb232160 Zea mays HOM05D003624 ORTHO05D004188 2.9e-77 292.7 372 49.2
FAN01G1443 Fragaria x ananassa HOM05D003624 ORTHO05D004188 5.0e-77 292.0 342 51.5
LjContig00310g0027848 Lotus japonicus HOM05D003624 ORTHO05D004188 1.5e-76 290.4 344 52.0
BcaB02g10822 Brassica carinata HOM05D003624 ORTHO05D004188 3.2e-76 289.3 342 49.4
BcaC08g44198 Brassica carinata HOM05D003624 ORTHO05D004188 7.2e-76 288.1 345 49.0
A05p17470 Brassica napus HOM05D003624 ORTHO05D004188 7.2e-76 288.1 344 49.7
BolC6t36805H Brassica oleracea HOM05D003624 ORTHO05D004188 7.2e-76 288.1 345 49.0
BraA05t20642Z Brassica rapa HOM05D003624 ORTHO05D004188 7.2e-76 288.1 344 49.7
C06p16060 Brassica napus HOM05D003624 ORTHO05D004188 1.2e-75 287.3 345 49.0
BcaB04g16957 Brassica carinata HOM05D003624 ORTHO05D004188 8.0e-75 284.6 349 49.0
COL.COLO4_15033 Corchorus olitorius HOM05D003624 ORTHO05D004188 1.2e-73 280.8 315 53.7
Nitab4.5_0004476g0070 Nicotiana tabacum HOM05D003624 ORTHO05D004188 1.5e-73 280.4 286 56.3
Os03g0570300 Oryza sativa ssp. japonica HOM05D003624 ORTHO05D004188 2.6e-73 279.6 374 47.3
Pp3c24_1610 Physcomitrium patens HOM05D003624 ORTHO05D004188 4.4e-73 278.9 354 46.9
Psat2g013800 Pisum sativum HOM05D003624 ORTHO05D004188 1.4e-71 273.9 316 50.9
AagrBONN_evm.TU.Sc2ySwM_368.2590 Anthoceros agrestis HOM05D003624 ORTHO05D004188 1.8e-71 273.5 352 48.3
COL.COLO4_34579 Corchorus olitorius HOM05D003624 ORTHO05D004188 1.6e-70 270.4 332 49.7
C03p92710 Brassica napus HOM05D003624 ORTHO05D004188 2.9e-69 266.2 348 47.1
A08p00650 Brassica napus HOM05D003624 ORTHO05D004188 8.6e-69 264.6 344 47.4
BraA08t32123Z Brassica rapa HOM05D003624 ORTHO05D004188 8.6e-69 264.6 344 47.4
DCAR_027848 Daucus carota HOM05D003624 ORTHO05D004188 1.1e-68 264.2 336 47.0
BcaC01g01521 Brassica carinata HOM05D003624 ORTHO05D004188 1.5e-68 263.8 342 47.1
BolSC126t60220H Brassica oleracea HOM05D003624 ORTHO05D004188 1.5e-68 263.8 342 47.1
SMO358G0194 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 2.5e-68 263.1 341 45.7
Zm00001eb208070 Zea mays HOM05D003624 ORTHO05D004188 7.2e-68 261.5 371 45.6
GSVIVG01008269001 Vitis vinifera HOM05D003624 ORTHO05D004188 1.8e-66 256.9 288 54.9
Atru.chr11.11 Acer truncatum HOM05D003624 ORTHO05D004188 2.3e-66 256.5 283 50.9
SMO142G0061 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 6.8e-66 255.0 306 47.1
SEGI_37535 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 1.4e-63 247.3 361 44.0
Prupe.1G588200 Prunus persica HOM05D003624 ORTHO05D004188 1.5e-60 237.3 232 61.2
EL10Ac6g13458 Beta vulgaris HOM05D003624 ORTHO05D004188 2.3e-58 229.9 333 40.8
CAN.G1013.23 Capsicum annuum HOM05D003624 ORTHO05D004188 5.2e-58 228.8 340 42.4
CARHR218910 Cardamine hirsuta HOM05D003624 ORTHO05D004188 2.1e-51 206.8 191 59.2
QL08p059869 Quercus lobata HOM05D003624 ORTHO05D004188 2.8e-51 206.5 305 46.2
Ca_06298_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 8.0e-51 204.9 235 53.6
Lj8P417T12 Lonicera japonica HOM05D003624 ORTHO05D004188 2.0e-49 200.3 133 80.5
Actinidia02952 Actinidia chinensis HOM05D003624 ORTHO05D004188 1.3e-48 197.6 192 56.8
AUR62001070 Chenopodium quinoa HOM05D003624 ORTHO05D004188 1.1e-47 194.5 187 56.1
MD07G1197800 Malus domestica HOM05D003624 ORTHO05D004188 1.5e-44 184.1 216 54.6
Cpa.g.sc80.54 Carica papaya HOM05D003624 ORTHO05D004188 2.5e-44 183.3 135 69.6
Ca_20539_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 3.7e-40 169.5 190 51.6
RcHm_v2.0_Chr4g0406621 Rosa chinensis HOM05D003624 ORTHO05D004188 1.1e-39 167.9 236 47.0
CBR_g36354 Chara braunii HOM05D003624 ORTHO05D004188 7.1e-39 165.2 130 65.4
Cre16.g654350 Chlamydomonas reinhardtii HOM05D003624 ORTHO05D004188 6.0e-38 162.2 383 31.9
SEGI_09016 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 1.1e-36 157.9 139 59.0
SEGI_33076 Sequoiadendron giganteum HOM05D003919 ORTHO05D004188 7.3e-36 155.2 151 55.6
arahy.Tifrunner.gnm1.ann1.8ZK91E Arachis hypogaea HOM05D003624 ORTHO05D004188 9.5e-36 154.8 92 81.5
MCO11G291 Micromonas commoda HOM05D003624 ORTHO05D004188 6.2e-35 152.1 356 31.7
RcHm_v2.0_Chr2g0124981 Rosa chinensis HOM05D003624 ORTHO05D004188 2.4e-34 150.2 187 53.5
arahy.Tifrunner.gnm1.ann1.Y1WZEQ Arachis hypogaea HOM05D003624 ORTHO05D004188 2.6e-33 146.7 205 45.9
unitig_26.g9714 Utricularia gibba HOM05D001237 ORTHO05D001827 9.9e-33 144.8 146 54.1
ATR0691G167 Amborella trichopoda HOM05D003624 ORTHO05D004188 8.4e-32 141.7 90 74.4
Duzib106G1275 Durio zibethinus HOM05D003624 ORTHO05D004188 9.2e-31 138.3 217 43.8
SEGI_08994 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 1.3e-29 134.4 124 59.7
SEGI_35739 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 1.3e-29 134.4 124 59.7
CBR_g4138 Chara braunii HOM05D003624 ORTHO05D004188 1.1e-28 131.3 183 42.1
Carub.0001s4393 Capsella rubella HOM05D003624 ORTHO05D004188 1.9e-28 130.6 72 80.6
arahy.Tifrunner.gnm1.ann1.P0I32D Arachis hypogaea HOM05D003624 ORTHO05D004188 1.2e-27 127.9 92 70.7
Prupe.4G141400 Prunus persica HOM05D003624 ORTHO05D004188 2.4e-26 123.6 80 80.0
SMO347G0189 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 2.6e-25 120.2 339 28.9
COL.COLO4_15032 Corchorus olitorius HOM05D003624 ORTHO05D004188 1.1e-23 114.8 72 69.4
RcHm_v2.0_Chr4g0406611 Rosa chinensis HOM05D003624 ORTHO05D004188 2.4e-23 113.6 80 75.0
Actinidia07728 Actinidia chinensis HOM05D003624 ORTHO05D004188 2.7e-22 110.2 73 75.3
HPP92_019195 Vanilla planifolia HOM05D003624 ORTHO05D004188 3.5e-22 109.8 77 74.0
unitig_26.g9713 Utricularia gibba HOM05D003624 ORTHO05D004188 2.8e-19 100.1 77 68.8
arahy.Tifrunner.gnm1.ann1.T8I7QW Arachis hypogaea HOM05D003624 ORTHO05D004188 2.9e-16 90.1 92 55.4
DCAR_004680 Daucus carota HOM05D003624 ORTHO05D004188 1.2e-14 84.7 54 74.1
SEGI_06253 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 2.1e-14 84.0 94 54.3
Lj8P608T25 Lonicera japonica HOM05D003624 ORTHO05D004188 9.6e-12 75.1 74 60.8
Ca_06299_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 2.4e-10 70.5 129 41.9
Cfa024674 Carpinus fangiana HOM05D003624 ORTHO05D004188 2.0e-09 67.4 71 38.0
SEGI_33130 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 1.2e-06 58.2 61 55.7


User provided reference genes

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