Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C254T7 Lonicera japonica HOM05D005885 ORTHO05D008127 2.4e-237 825.1 406 100.0
CSS0003633 Camellia sinensis var. sinensis HOM05D005885 ORTHO05D008127 7.7e-196 687.2 383 85.6
Dinv37758 Davidia involucrata HOM05D005885 ORTHO05D008127 6.5e-195 684.1 390 84.9
Nn4g26386 Nelumbo nucifera HOM05D005885 ORTHO05D008127 6.3e-190 667.5 393 80.7
Oeu040058.2 Olea europaea HOM05D005885 ORTHO05D008127 1.4e-189 666.4 382 81.7
Nitab4.5_0010237g0040 Nicotiana tabacum HOM05D005885 ORTHO05D008127 2.3e-187 659.1 384 81.5
Cfa012022 Carpinus fangiana HOM05D005885 ORTHO05D008127 1.1e-186 656.8 392 81.1
Cc08_g13300 Coffea canephora HOM05D005885 ORTHO05D008127 9.5e-186 653.7 397 79.3
CAN.G630.67 Capsicum annuum HOM05D005885 ORTHO05D008127 4.0e-184 648.3 381 81.9
GSVIVG01004905001 Vitis vinifera HOM05D005885 ORTHO05D008127 4.0e-184 648.3 379 83.4
Cpa.g.sc29.82 Carica papaya HOM05D005885 ORTHO05D008127 8.9e-184 647.1 382 81.4
QL12p015122 Quercus lobata HOM05D005885 ORTHO05D008127 1.2e-183 646.7 400 79.5
CANSAT21G1830 Cannabis sativa HOM05D005885 ORTHO05D008127 3.4e-183 645.2 388 80.2
Hma1.2p1_0138F.1_g063110 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 3.4e-183 645.2 390 80.5
Duzib205G0406 Durio zibethinus HOM05D005885 ORTHO05D008127 5.7e-183 644.4 401 79.3
Nitab4.5_0003534g0090 Nicotiana tabacum HOM05D005885 ORTHO05D008127 5.7e-183 644.4 427 74.0
Prupe.5G080300 Prunus persica HOM05D005885 ORTHO05D008127 9.8e-183 643.7 384 79.7
TAR375G0281 Trochodendron aralioides HOM05D005885 ORTHO05D008127 3.7e-182 641.7 390 79.0
Thecc.03G262500 Theobroma cacao HOM05D005885 ORTHO05D008127 8.3e-182 640.6 390 79.5
TWI81G1092 Tripterygium wilfordii HOM05D005885 ORTHO05D008127 8.3e-182 640.6 382 79.6
Sabra01G0089600 Salix brachista HOM05D005885 ORTHO05D008127 2.4e-181 639.0 397 79.8
Atru.chr9.1440 Acer truncatum HOM05D005885 ORTHO05D008127 4.1e-181 638.3 393 78.6
PGSC0003DMG400003932 Solanum tuberosum HOM05D005885 ORTHO05D008127 2.7e-180 635.6 381 79.0
Eucgr.D01985 Eucalyptus grandis HOM05D005885 ORTHO05D008127 7.8e-180 634.0 385 78.2
Sopen08g027900 Solanum pennellii HOM05D005885 ORTHO05D008127 2.3e-179 632.5 381 79.5
Solyc08g079530.3 Solanum lycopersicum HOM05D005885 ORTHO05D008127 2.9e-179 632.1 381 79.3
Gohir.A03G011600 Gossypium hirsutum HOM05D005885 ORTHO05D008127 5.0e-179 631.3 387 79.3
Sc07g0009420 Simmondsia chinensis HOM05D005885 ORTHO05D008127 5.0e-179 631.3 391 77.0
Hma1.2p1_0138F.1_g063120 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 8.6e-179 630.6 361 83.1
Potri.001G116800 Populus trichocarpa HOM05D005885 ORTHO05D008127 1.5e-178 629.8 391 79.0
Aqoxy7G00633 Aquilegia oxysepala HOM05D005885 ORTHO05D008127 3.3e-178 628.6 391 77.0
MD04G1078900 Malus domestica HOM05D005885 ORTHO05D008127 1.6e-177 626.3 393 77.9
PGR031G0042 Punica granatum HOM05D005885 ORTHO05D008127 1.6e-177 626.3 384 76.8
RcHm_v2.0_Chr7g0201341 Rosa chinensis HOM05D005885 ORTHO05D008127 1.6e-177 626.3 384 78.6
Manes.01G072400 Manihot esculenta HOM05D005885 ORTHO05D008127 3.6e-177 625.2 382 78.5
Lsat_1_v5_gn_6_9740 Lactuca sativa HOM05D005885 ORTHO05D008127 4.7e-177 624.8 398 76.4
ClCG01G003610 Citrullus lanatus HOM05D005885 ORTHO05D008127 1.0e-176 623.6 389 76.6
Gohir.D03G158300 Gossypium hirsutum HOM05D005885 ORTHO05D008127 2.3e-176 622.5 390 78.2
Sed0024879 Sechium edule HOM05D005885 ORTHO05D008127 3.0e-176 622.1 387 77.3
THA.LOC104809442 Tarenaya hassleriana HOM05D005885 ORTHO05D008127 3.0e-176 622.1 388 77.8
Carub.0001s1203 Capsella rubella HOM05D005885 ORTHO05D008127 4.0e-176 621.7 387 78.3
Gorai.003G166800 Gossypium raimondii HOM05D005885 ORTHO05D008127 5.2e-176 621.3 390 78.2
MELO3C005584.2 Cucumis melo HOM05D005885 ORTHO05D008127 6.8e-176 620.9 394 75.6
Migut.A00839 Erythranthe guttata HOM05D005885 ORTHO05D008127 1.5e-175 619.8 381 76.9
CsaV3_5G003710 Cucumis sativus L. HOM05D005885 ORTHO05D008127 2.6e-175 619.0 387 75.7
MSTRG.25552 Avicennia marina HOM05D005885 ORTHO05D008127 5.8e-175 617.8 381 78.0
FvH4_5g00790 Fragaria vesca HOM05D005885 ORTHO05D008127 1.7e-174 616.3 384 76.3
Sp1g10970 Schrenkiella parvula HOM05D005885 ORTHO05D008127 3.7e-174 615.1 384 78.1
FAN08G2136 Fragaria x ananassa HOM05D005885 ORTHO05D000042 6.4e-174 614.4 384 75.8
Ciclev10019819m.g Citrus clementina HOM05D005885 ORTHO05D008127 1.8e-173 612.8 399 75.4
arahy.Tifrunner.gnm1.ann1.FFRS2J Arachis hypogaea HOM05D005885 ORTHO05D008127 3.2e-173 612.1 383 75.5
ECA233G5871 Erigeron canadensis HOM05D005885 ORTHO05D008127 3.2e-173 612.1 383 77.3
AT1G12370 Arabidopsis thaliana HOM05D005885 ORTHO05D008127 9.2e-173 610.5 387 76.5
CARHR012660 Cardamine hirsuta HOM05D005885 ORTHO05D008127 1.6e-172 609.8 384 77.6
AL1G23690 Arabidopsis lyrata HOM05D005885 ORTHO05D008127 2.0e-172 609.4 385 77.1
C08p15390 Brassica napus HOM05D005885 ORTHO05D008127 2.7e-172 609.0 390 75.9
AUR62017386 Chenopodium quinoa HOM05D005885 ORTHO05D008127 3.5e-172 608.6 383 75.2
FAN04G1127 Fragaria x ananassa HOM05D005885 ORTHO05D008127 4.6e-172 608.2 389 75.1
Thhalv10007458m.g Eutrema salsugineum HOM05D005885 ORTHO05D008127 2.3e-171 605.9 384 77.1
Lalb_Chr09g0324521 Lupinus albus HOM05D005885 ORTHO05D008127 2.3e-171 605.9 385 76.6
Haze_09046 Corylus avellana HOM05D005885 ORTHO05D008127 5.0e-171 604.7 387 77.0
BolC8t49167H Brassica oleracea HOM05D005885 ORTHO05D008127 6.6e-171 604.4 396 74.7
DCAR_008454 Daucus carota HOM05D005885 ORTHO05D008127 8.6e-171 604.0 367 79.3
arahy.Tifrunner.gnm1.ann1.J86H7Q Arachis hypogaea HOM05D005885 ORTHO05D008127 1.9e-170 602.8 393 73.8
PSO478G5024 Papaver somniferum HOM05D005885 ORTHO05D008127 4.3e-170 601.7 394 73.4
SalBow6G1575 Salvia bowleyana HOM05D005885 ORTHO05D008127 4.3e-170 601.7 381 75.3
Aa31LG1G2270 Aethionema arabicum HOM05D005885 ORTHO05D008127 1.6e-169 599.7 384 76.6
HanXRQChr07g0188641 Helianthus annuus HOM05D005885 ORTHO05D008127 8.0e-169 597.4 352 81.8
Medtr5g011780 Medicago truncatula HOM05D005885 ORTHO05D008127 8.0e-169 597.4 392 73.0
A08p32870 Brassica napus HOM05D005885 ORTHO05D008127 1.1e-168 597.0 386 73.8
CiPaw.11G147000 Carya illinoinensis HOM05D005885 ORTHO05D008127 3.1e-168 595.5 354 81.6
Glyma.11G029500 Glycine max HOM05D005885 ORTHO05D008127 5.2e-168 594.7 390 74.1
TPR.G19593 Trifolium pratense HOM05D005885 ORTHO05D008127 1.2e-167 593.6 394 73.1
COL.COLO4_23868 Corchorus olitorius HOM05D005885 ORTHO05D008127 3.4e-167 592.0 388 75.3
EL10Ac5g12625 Beta vulgaris HOM05D005885 ORTHO05D008127 2.9e-166 589.0 387 73.6
Phvul.002G059800 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 3.7e-166 588.6 408 71.1
BraA08t35209Z Brassica rapa HOM05D005885 ORTHO05D008127 6.4e-166 587.8 377 75.3
MBI04_g35270_MAGBIO Magnolia biondii HOM05D005885 ORTHO05D008127 8.3e-166 587.4 391 72.6
Psat2g179680 Pisum sativum HOM05D005885 ORTHO05D008127 8.3e-166 587.4 391 71.4
unitig_744.g24322 Utricularia gibba HOM05D005885 ORTHO05D008127 1.4e-165 586.6 379 74.1
ECA233G1449 Erigeron canadensis HOM05D005885 ORTHO05D008127 2.0e-164 582.8 354 78.2
VMungo1215G0841 Vigna mungo HOM05D005885 ORTHO05D008127 7.8e-164 580.9 393 72.0
Lj2g0010887 Lotus japonicus HOM05D005885 ORTHO05D008127 8.6e-163 577.4 391 72.6
SGA_v2.0_scaffold120G32808 Striga asiatica HOM05D005885 ORTHO05D008127 5.2e-160 568.2 396 70.5
ATR0810G103 Amborella trichopoda HOM05D005885 ORTHO05D008127 4.9e-158 561.6 393 70.0
CDE12G0141 Ceratophyllum demersum HOM05D005885 ORTHO05D008127 6.4e-158 561.2 383 69.2
Rhsim07G0193500 Rhododendron simsii HOM05D005885 ORTHO05D008127 1.6e-156 556.6 377 72.9
Ah.02g116190 Amaranthus hybridus HOM05D005885 ORTHO05D008127 2.1e-156 556.2 361 73.1
FAN18G2769 Fragaria x ananassa HOM05D005885 ORTHO05D000042 4.7e-153 545.0 403 67.5
PSO782G2305 Papaver somniferum HOM05D005885 ORTHO05D008127 3.8e-150 535.4 394 67.0
vmacro00223 Vaccinium macrocarpon HOM05D005885 ORTHO05D008127 2.4e-149 532.7 363 73.3
Actinidia14469 Actinidia chinensis HOM05D005885 ORTHO05D008127 1.2e-148 530.4 351 74.6
Ca_06688_v3 Cicer arietinum L. HOM05D005885 ORTHO05D008127 9.6e-146 520.8 391 66.0
Hund11561 Selenicereus undatus HOM05D005885 ORTHO05D008127 1.2e-145 520.4 390 65.9
AagrBONN_evm.TU.Sc2ySwM_117.35 Anthoceros agrestis HOM05D005885 ORTHO05D008127 5.8e-143 511.5 382 63.9
Actinidia02084 Actinidia chinensis HOM05D005885 ORTHO05D008127 4.6e-140 501.9 367 69.5
Peaxi162Scf00271g00133 Petunia axillaris HOM05D005885 ORTHO05D008127 3.3e-138 495.7 364 68.1
CBR_g17934 Chara braunii HOM05D005885 ORTHO05D008127 9.3e-133 477.6 400 59.5
Mapoly0149s0026 Marchantia polymorpha HOM05D005885 ORTHO05D008127 3.1e-128 462.6 382 59.2
SMO137G0163 Selaginella moellendorffii HOM05D005885 ORTHO05D008127 2.2e-126 456.4 387 57.1
Zm00001eb026960 Zea mays HOM05D005885 ORTHO05D008127 4.2e-125 452.2 392 57.4
Pp3c5_3400 Physcomitrium patens HOM05D005885 ORTHO05D008127 7.1e-125 451.4 385 58.2
FAN13G1573 Fragaria x ananassa HOM05D005885 ORTHO05D008127 1.6e-124 450.3 345 64.9
SEGI_07453 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 7.9e-116 421.4 281 70.5
Cre12.g533000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D008127 1.8e-115 420.2 396 55.8
Os10g0167600 Oryza sativa ssp. japonica HOM05D005885 ORTHO05D008127 1.0e-110 404.4 330 60.6
MCO01G340 Micromonas commoda HOM05D005885 ORTHO05D008127 3.0e-107 392.9 388 53.4
HPP92_020977 Vanilla planifolia HOM05D005885 ORTHO05D008127 5.9e-95 352.1 239 67.4
MCO16G424 Micromonas commoda HOM05D005885 ORTHO05D008127 2.2e-94 350.1 399 49.9
BcaB03g13192 Brassica carinata HOM05D005885 ORTHO05D008127 3.6e-92 342.8 228 72.8
PRCOL_00005710 Prasinoderma coloniale HOM05D005885 ORTHO05D008127 7.0e-88 328.6 388 46.6
Haze_26274 Corylus avellana HOM05D005885 ORTHO05D008127 1.3e-78 297.7 361 44.0
TAR375G0948 Trochodendron aralioides HOM05D005885 ORTHO05D008127 3.3e-69 266.5 151 82.8
MCO05G034 Micromonas commoda HOM05D005885 ORTHO05D268017 6.2e-44 182.6 399 34.1
Glyma.01G212300 Glycine max HOM05D005885 ORTHO05D008127 9.5e-37 158.7 90 78.9
TAR375G0547 Trochodendron aralioides HOM05D005885 ORTHO05D008127 8.9e-35 152.1 107 74.8
Phvul.002G151001 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 3.2e-32 143.7 93 71.0
QL09p013714 Quercus lobata HOM05D005885 ORTHO05D008127 1.5e-29 134.8 135 52.6
HanXRQChr10g0306201 Helianthus annuus HOM05D005885 ORTHO05D008127 2.0e-26 124.4 104 62.5
AUR62010516 Chenopodium quinoa HOM05D005885 ORTHO05D008127 3.5e-23 113.6 56 89.3
SEGI_07050 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 3.0e-22 110.5 98 57.1
COL.COLO4_29220 Corchorus olitorius HOM05D005885 ORTHO05D008127 2.9e-17 94.0 54 85.2
Cre02.g118000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D044175 6.2e-12 76.3 130 35.4
PRCOL_00007238 Prasinoderma coloniale HOM05D005885 ORTHO05D044175 4.6e-07 60.1 134 33.6
BolC1t01666H Brassica oleracea HOM05D005885 ORTHO05D023940 5.1e-06 56.6 38 63.2
BolC2t10740H Brassica oleracea HOM05D005885 ORTHO05D023940 8.7e-06 55.8 48 56.2


User provided reference genes

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