Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 7.2e-104 380.6 188 100.0
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 1.3e-73 280.0 183 77.6
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 9.4e-72 273.9 183 73.2
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 6.1e-71 271.2 183 73.2
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 1.0e-70 270.4 164 79.9
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 2.3e-70 269.2 183 73.8
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 4.0e-70 268.5 183 73.2
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 4.0e-70 268.5 180 73.9
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 1.2e-69 266.9 180 73.3
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 1.5e-69 266.5 180 72.8
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 2.0e-69 266.2 176 74.4
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 2.6e-69 265.8 182 72.0
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 5.7e-69 264.6 180 71.7
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 1.3e-68 263.5 180 71.7
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 3.7e-68 261.9 176 72.7
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 3.7e-68 261.9 180 71.7
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 8.3e-68 260.8 180 71.7
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 1.1e-67 260.4 178 71.9
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 1.8e-67 259.6 172 75.0
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 4.1e-67 258.5 180 71.1
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 2.3e-65 252.7 166 73.5
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 3.8e-65 251.9 161 76.4
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 8.6e-65 250.8 169 73.4
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 1.1e-64 250.4 178 68.5
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 1.9e-64 249.6 180 69.4
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 1.9e-64 249.6 178 70.2
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 4.2e-64 248.4 166 72.3
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 5.5e-64 248.1 179 68.7
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 5.5e-64 248.1 178 68.0
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 7.2e-64 247.7 178 69.7
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 9.5e-64 247.3 166 72.9
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 9.5e-64 247.3 179 68.2
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 1.2e-63 246.9 161 73.9
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 1.2e-63 246.9 184 67.4
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.2e-63 246.9 184 67.4
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 1.2e-63 246.9 180 68.3
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 1.2e-63 246.9 176 69.3
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 2.1e-63 246.1 179 68.2
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 2.8e-63 245.7 178 69.1
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 4.7e-63 245.0 165 71.5
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 8.0e-63 244.2 163 73.6
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 8.0e-63 244.2 163 73.6
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 8.0e-63 244.2 181 66.3
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 8.0e-63 244.2 183 66.7
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 1.8e-62 243.0 165 71.5
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 3.0e-62 242.3 177 66.1
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 4.0e-62 241.9 158 73.4
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 6.8e-62 241.1 184 65.8
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 8.8e-62 240.7 165 71.5
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 8.8e-62 240.7 165 71.5
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 8.8e-62 240.7 158 72.8
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 2.0e-61 239.6 162 70.4
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 2.6e-61 239.2 176 67.0
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 4.4e-61 238.4 181 66.3
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 7.5e-61 237.7 165 70.9
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 2.8e-60 235.7 167 68.3
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 2.8e-60 235.7 165 68.5
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 3.7e-60 235.3 183 65.6
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 4.9e-60 235.0 183 62.8
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 6.3e-60 234.6 190 64.7
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 6.3e-60 234.6 167 67.7
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 4.1e-59 231.9 184 65.8
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 5.4e-59 231.5 188 64.4
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 9.2e-59 230.7 185 62.2
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 9.2e-59 230.7 185 63.8
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 2.0e-58 229.6 183 65.6
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 3.5e-58 228.8 178 63.5
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 5.9e-58 228.0 153 72.5
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 1.0e-57 227.3 183 63.4
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 2.9e-57 225.7 188 62.2
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 3.8e-57 225.3 164 65.2
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 5.0e-57 224.9 228 54.4
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 5.0e-57 224.9 190 62.1
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 1.4e-54 216.9 192 57.3
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 8.9e-54 214.2 159 66.7
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 1.8e-51 206.5 155 63.9
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 7.0e-51 204.5 156 70.5
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 2.3e-49 199.5 180 60.0
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 5.0e-49 198.4 179 56.4
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 2.3e-46 189.5 164 59.8
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 3.1e-46 189.1 178 53.4
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 6.8e-46 188.0 171 54.4
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 8.9e-46 187.6 162 58.0
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 1.2e-45 187.2 162 58.0
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 3.4e-45 185.7 162 57.4
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 3.4e-45 185.7 163 59.5
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 4.4e-45 185.3 155 58.1
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 9.8e-45 184.1 155 59.4
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 9.8e-45 184.1 155 59.4
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 1.7e-44 183.3 176 52.3
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 3.7e-44 182.2 155 58.1
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 6.4e-44 181.4 161 57.8
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 3.2e-43 179.1 155 58.7
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 5.4e-43 178.3 155 57.4
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 9.2e-43 177.6 178 54.5
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 9.2e-43 177.6 163 55.2
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 9.2e-43 177.6 162 51.9
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 2.7e-42 176.0 178 53.9
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 7.8e-42 174.5 147 57.1
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 1.3e-41 173.7 155 54.8
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 7.3e-40 167.9 182 52.2
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 6.2e-39 164.9 150 52.7
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 3.4e-37 159.1 164 48.2
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 4.9e-36 155.2 147 51.0
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 3.2e-35 152.5 167 48.5
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 5.4e-35 151.8 169 44.4
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 2.1e-31 139.8 155 45.2
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 4.4e-29 132.1 149 53.0
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 1.6e-26 123.6 76 73.7
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 2.7e-26 122.9 177 39.5
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 1.7e-25 120.2 88 69.3
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 2.5e-24 116.3 64 84.4
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 7.1e-11 71.6 53 60.4
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 9.3e-11 71.2 52 75.0
Dinv43551 Davidia involucrata HOM05D006268 ORTHO05D180404 1.1e-08 64.3 78 47.4
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 3.3e-08 62.8 57 56.1


User provided reference genes

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