Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A592T44 Lonicera japonica HOM05D005823 ORTHO05D007536 8.5e-76 287.0 149 100.0
Lsat_1_v5_gn_2_92000 Lactuca sativa HOM05D005823 ORTHO05D007536 1.3e-44 183.3 147 67.3
Actinidia36091 Actinidia chinensis HOM05D005823 ORTHO05D007536 2.3e-44 182.6 148 66.2
CSS0040897 Camellia sinensis var. sinensis HOM05D005823 ORTHO05D007536 3.9e-44 181.8 148 67.6
CSS0010337 Camellia sinensis var. sinensis HOM05D005823 ORTHO05D007536 1.1e-43 180.3 148 66.9
CAN.G544.5 Capsicum annuum HOM05D005823 ORTHO05D007536 1.5e-40 169.9 150 65.3
Rhsim10G0021100 Rhododendron simsii HOM05D005823 ORTHO05D007536 2.0e-40 169.5 155 67.1
Oeu054687.1 Olea europaea HOM05D005823 ORTHO05D007536 2.6e-40 169.1 147 64.6
Hma1.2p1_0858F.1_g229360 Hydrangea macrophylla HOM05D005823 ORTHO05D007536 1.7e-39 166.4 147 63.3
Hma1.2p1_0858F.1_g229370 Hydrangea macrophylla HOM05D005823 ORTHO05D007536 1.7e-39 166.4 147 63.3
vmacro05834 Vaccinium macrocarpon HOM05D005823 ORTHO05D007536 8.3e-39 164.1 153 64.1
DCAR_015046 Daucus carota HOM05D005823 ORTHO05D007536 5.4e-38 161.4 148 63.5
TAR374G0440 Trochodendron aralioides HOM05D005823 ORTHO05D007536 2.7e-37 159.1 147 60.5
CsaV3_3G042460 Cucumis sativus L. HOM05D005823 ORTHO05D007536 3.5e-37 158.7 138 62.3
Nitab4.5_0004348g0040 Nicotiana tabacum HOM05D005823 ORTHO05D007536 4.6e-37 158.3 147 61.9
HanXRQChr14g0450321 Helianthus annuus HOM05D005823 ORTHO05D007536 7.8e-37 157.5 151 61.6
Peaxi162Scf00700g00625 Petunia axillaris HOM05D005823 ORTHO05D007536 7.8e-37 157.5 148 62.2
CANSAT64G0786 Cannabis sativa HOM05D005823 ORTHO05D007536 1.7e-36 156.4 120 71.7
Sopen12g025140 Solanum pennellii HOM05D005823 ORTHO05D007536 3.0e-36 155.6 148 60.8
PGSC0003DMG400030092 Solanum tuberosum HOM05D005823 ORTHO05D007536 5.1e-36 154.8 147 61.2
Nn4g22771 Nelumbo nucifera HOM05D005823 ORTHO05D007536 6.6e-36 154.5 149 59.1
Dinv35071 Davidia involucrata HOM05D005823 ORTHO05D007536 1.1e-35 153.7 100 81.0
Solyc12g062250.2 Solanum lycopersicum HOM05D005823 ORTHO05D007536 1.5e-35 153.3 147 60.5
Nitab4.5_0004753g0050 Nicotiana tabacum HOM05D005823 ORTHO05D007536 2.5e-35 152.5 147 59.9
MELO3C009960.2 Cucumis melo HOM05D005823 ORTHO05D007536 3.3e-35 152.1 121 66.1
Cc07_g02150 Coffea canephora HOM05D005823 ORTHO05D007536 9.5e-35 150.6 158 60.8
Migut.H00112 Erythranthe guttata HOM05D005823 ORTHO05D007536 2.1e-34 149.4 154 61.0
GSVIVG01032464001 Vitis vinifera HOM05D005823 ORTHO05D007536 2.1e-34 149.4 144 56.2
ClCG10G014190 Citrullus lanatus HOM05D005823 ORTHO05D007536 8.1e-34 147.5 138 60.9
PGR142G1348 Punica granatum HOM05D005823 ORTHO05D007536 4.0e-33 145.2 117 65.8
Cpa.g.sc215.12 Carica papaya HOM05D005823 ORTHO05D007536 1.2e-32 143.7 151 59.6
TWI36G1575 Tripterygium wilfordii HOM05D005823 ORTHO05D007536 2.6e-32 142.5 121 66.9
THA.LOC104821071 Tarenaya hassleriana HOM05D005823 ORTHO05D007536 1.3e-31 140.2 122 65.6
Manes.17G116600 Manihot esculenta HOM05D005823 ORTHO05D007536 2.9e-31 139.0 121 62.0
AL3G10660 Arabidopsis lyrata HOM05D005823 ORTHO05D007536 6.4e-31 137.9 120 65.0
Duzib187G0863 Durio zibethinus HOM05D005823 ORTHO05D007536 6.4e-31 137.9 102 71.6
QL02p076317 Quercus lobata HOM05D005823 ORTHO05D007536 6.4e-31 137.9 133 60.2
Sp3g00560 Schrenkiella parvula HOM05D005823 ORTHO05D007536 1.4e-30 136.7 90 78.9
Thecc.04G010400 Theobroma cacao HOM05D005823 ORTHO05D007536 1.4e-30 136.7 109 67.9
Eucgr.I01789 Eucalyptus grandis HOM05D005823 ORTHO05D007536 2.4e-30 136.0 87 78.2
Gohir.D07G227600 Gossypium hirsutum HOM05D005823 ORTHO05D007536 2.4e-30 136.0 115 64.3
Gorai.001G262500 Gossypium raimondii HOM05D005823 ORTHO05D007536 2.4e-30 136.0 115 64.3
SGA_v2.0_scaffold135G34877 Striga asiatica HOM05D005823 ORTHO05D007536 2.4e-30 136.0 150 56.0
AT3G01510 Arabidopsis thaliana HOM05D005823 ORTHO05D007536 4.1e-30 135.2 90 76.7
FAN02G0427 Fragaria x ananassa HOM05D005823 ORTHO05D007536 5.4e-30 134.8 84 78.6
EL10Ac4g08593 Beta vulgaris HOM05D005823 ORTHO05D007536 7.1e-30 134.4 117 59.0
CARHR075440 Cardamine hirsuta HOM05D005823 ORTHO05D007536 1.2e-29 133.7 132 62.1
MBI16_g32206_MAGBIO Magnolia biondii HOM05D005823 ORTHO05D007536 1.2e-29 133.7 136 57.4
Atru.chr6.2309 Acer truncatum HOM05D005823 ORTHO05D007536 2.1e-29 132.9 88 75.0
Aqoxy3G02952 Aquilegia oxysepala HOM05D005823 ORTHO05D007536 2.1e-29 132.9 148 53.4
Aa31LG5G10620 Aethionema arabicum HOM05D005823 ORTHO05D007536 2.7e-29 132.5 144 56.9
BcaC01g04522 Brassica carinata HOM05D005823 ORTHO05D007536 4.6e-29 131.7 87 77.0
Ciclev10017987m.g Citrus clementina HOM05D005823 ORTHO05D007536 4.6e-29 131.7 84 76.2
Gohir.A07G220900 Gossypium hirsutum HOM05D005823 ORTHO05D007536 4.6e-29 131.7 113 65.5
FAN09G0265 Fragaria x ananassa HOM05D005823 ORTHO05D007536 7.8e-29 131.0 116 62.1
BolC3t16226H Brassica oleracea HOM05D005823 ORTHO05D007536 1.0e-28 130.6 91 76.9
Carub.0003s0058 Capsella rubella HOM05D005823 ORTHO05D007536 1.3e-28 130.2 90 74.4
ECA238G2958 Erigeron canadensis HOM05D005823 ORTHO05D007536 1.3e-28 130.2 130 60.8
Potri.001G349000 Populus trichocarpa HOM05D005823 ORTHO05D007536 1.3e-28 130.2 125 58.4
C03p39600 Brassica napus HOM05D005823 ORTHO05D007536 2.3e-28 129.4 91 75.8
SalBow1G1924 Salvia bowleyana HOM05D005823 ORTHO05D007536 2.3e-28 129.4 147 55.1
MD09G1032300 Malus domestica HOM05D005823 ORTHO05D007536 3.9e-28 128.6 151 53.0
A03p32520 Brassica napus HOM05D005823 ORTHO05D007536 6.6e-28 127.9 90 76.7
BraA03t12421Z Brassica rapa HOM05D005823 ORTHO05D007536 6.6e-28 127.9 90 76.7
FvH4_6g50790 Fragaria vesca HOM05D005823 ORTHO05D007536 1.1e-27 127.1 75 82.7
FAN05G1760 Fragaria x ananassa HOM05D005823 ORTHO05D007536 1.1e-27 127.1 88 76.1
Actinidia06018 Actinidia chinensis HOM05D005823 ORTHO05D007536 1.5e-27 126.7 79 83.5
FAN14G3736 Fragaria x ananassa HOM05D005823 ORTHO05D007536 1.9e-27 126.3 74 83.8
RcHm_v2.0_Chr2g0172181 Rosa chinensis HOM05D005823 ORTHO05D007536 3.3e-27 125.6 114 61.4
CiPaw.03G038900 Carya illinoinensis HOM05D005823 ORTHO05D007536 4.3e-27 125.2 70 85.7
Lalb_Chr10g0093861 Lupinus albus HOM05D005823 ORTHO05D007536 5.6e-27 124.8 92 67.4
Sed0002272 Sechium edule HOM05D005823 ORTHO05D007536 5.6e-27 124.8 142 57.0
Sabra16G0228500 Salix brachista HOM05D005823 ORTHO05D007536 1.6e-26 123.2 124 54.8
TPR.G30824 Trifolium pratense HOM05D005823 ORTHO05D007536 1.6e-26 123.2 84 70.2
Medtr7g034465 Medicago truncatula HOM05D005823 ORTHO05D007536 2.1e-26 122.9 84 71.4
CDE11G0210 Ceratophyllum demersum HOM05D005823 ORTHO05D007536 3.6e-26 122.1 132 56.8
Thhalv10020379m.g Eutrema salsugineum HOM05D005823 ORTHO05D007536 1.1e-25 120.6 77 81.8
Lj1g0008834 Lotus japonicus HOM05D005823 ORTHO05D007536 1.1e-25 120.6 122 58.2
PSO832G4481 Papaver somniferum HOM05D005823 ORTHO05D007536 1.1e-25 120.6 153 49.7
AUR62035471 Chenopodium quinoa HOM05D005823 ORTHO05D007536 1.8e-25 119.8 117 60.7
Hund20083 Selenicereus undatus HOM05D005823 ORTHO05D007536 3.1e-25 119.0 133 51.1
Glyma.19G069800 Glycine max HOM05D005823 ORTHO05D007536 9.0e-25 117.5 84 71.4
PSO063G0513 Papaver somniferum HOM05D005823 ORTHO05D007536 9.0e-25 117.5 154 50.0
VMungo1383G0860 Vigna mungo HOM05D005823 ORTHO05D007536 9.0e-25 117.5 90 63.3
Phvul.008G155300 Phaseolus vulgaris HOM05D005823 ORTHO05D007536 2.0e-24 116.3 84 69.0
arahy.Tifrunner.gnm1.ann1.1I70XP Arachis hypogaea HOM05D005823 ORTHO05D007536 3.4e-24 115.5 115 55.7
arahy.Tifrunner.gnm1.ann1.AB8GL3 Arachis hypogaea HOM05D005823 ORTHO05D007536 3.4e-24 115.5 115 55.7
AUR62019725 Chenopodium quinoa HOM05D005823 ORTHO05D007536 3.4e-24 115.5 125 52.8
CDE05G0333 Ceratophyllum demersum HOM05D005823 ORTHO05D007536 1.7e-23 113.2 72 76.4
COL.COLO4_28986 Corchorus olitorius HOM05D005823 ORTHO05D007536 1.7e-23 113.2 109 61.5
unitig_62.g23151 Utricularia gibba HOM05D005823 ORTHO05D007536 2.2e-23 112.8 64 84.4
ATR0730G038 Amborella trichopoda HOM05D005823 ORTHO05D007536 3.8e-23 112.1 150 49.3
Ca_14483_v3 Cicer arietinum L. HOM05D005823 ORTHO05D007536 3.2e-22 109.0 73 71.2
Os08g0379300 Oryza sativa ssp. japonica HOM05D005823 ORTHO05D007536 7.1e-22 107.8 73 67.1
Sc03g0007950 Simmondsia chinensis HOM05D005823 ORTHO05D007536 5.1e-20 101.7 64 71.9
Zm00001eb042550 Zea mays HOM05D005823 ORTHO05D007536 1.1e-19 100.5 104 52.9
CBR_g34939 Chara braunii HOM05D000019 ORTHO05D000048 9.0e-17 90.9 103 47.6
Haze_14680 Corylus avellana HOM05D005823 ORTHO05D007536 1.5e-16 90.1 92 57.6
Pp3c16_6290 Physcomitrium patens HOM05D005823 ORTHO05D007536 2.9e-15 85.9 72 54.2
Mapoly0060s0015 Marchantia polymorpha HOM05D005823 ORTHO05D007536 1.9e-14 83.2 70 51.4
AagrBONN_evm.TU.Sc2ySwM_228.3021 Anthoceros agrestis HOM05D005823 ORTHO05D007536 1.2e-13 80.5 70 52.9
SMO119G0254 Selaginella moellendorffii HOM05D005823 ORTHO05D007536 2.7e-13 79.3 55 65.5
Ah.06g187250 Amaranthus hybridus HOM05D005823 ORTHO05D007536 9.0e-09 64.3 96 41.7
SEGI_01545 Sequoiadendron giganteum HOM05D005823 ORTHO05D007536 1.5e-08 63.5 84 46.4
Lsat_1_v5_gn_6_55740 Lactuca sativa HOM05D005410 ORTHO05D007394 4.2e-06 55.5 95 32.6


User provided reference genes

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