Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P350T22 Lonicera japonica HOM05D004739 ORTHO05D005784 8.4e-85 317.0 163 100.0
Lj6A353T83 Lonicera japonica HOM05D004739 ORTHO05D005784 1.7e-37 159.8 128 68.0
Lj6C358T14 Lonicera japonica HOM05D004739 ORTHO05D005784 1.7e-37 159.8 131 66.4
Hma1.2p1_1286F.1_g273220 Hydrangea macrophylla HOM05D004739 ORTHO05D005784 5.7e-33 144.8 128 62.5
Hma1.2p1_1286F.1_g273230 Hydrangea macrophylla HOM05D004739 ORTHO05D005784 5.7e-33 144.8 128 62.5
Actinidia38940 Actinidia chinensis HOM05D004739 ORTHO05D005784 4.8e-32 141.7 128 58.6
CSS0046373 Camellia sinensis var. sinensis HOM05D004739 ORTHO05D005784 8.3e-32 141.0 120 62.5
vmacro15619 Vaccinium macrocarpon HOM05D004739 ORTHO05D005784 2.0e-30 136.3 157 51.0
Thecc.04G186700 Theobroma cacao HOM05D004739 ORTHO05D005784 5.9e-30 134.8 128 57.8
COL.COLO4_08079 Corchorus olitorius HOM05D004739 ORTHO05D005784 7.7e-30 134.4 155 51.6
Potri.002G233800 Populus trichocarpa HOM05D004739 ORTHO05D005784 7.7e-30 134.4 122 56.6
RcHm_v2.0_Chr4g0410481 Rosa chinensis HOM05D004739 ORTHO05D005784 7.7e-30 134.4 134 53.0
CiPaw.01G109700 Carya illinoinensis HOM05D004739 ORTHO05D005784 2.9e-29 132.5 128 55.5
Solyc09g098370.4 Solanum lycopersicum HOM05D004739 ORTHO05D005784 2.9e-29 132.5 123 56.9
Sopen09g036290 Solanum pennellii HOM05D004739 ORTHO05D005784 2.9e-29 132.5 123 56.9
FAN12G0062 Fragaria x ananassa HOM05D004739 ORTHO05D005784 5.0e-29 131.7 134 53.0
FAN12G0551 Fragaria x ananassa HOM05D004739 ORTHO05D005784 5.0e-29 131.7 134 53.0
GSVIVG01031656001 Vitis vinifera HOM05D004739 ORTHO05D005784 5.0e-29 131.7 128 56.2
TAR365G0018 Trochodendron aralioides HOM05D004739 ORTHO05D005784 6.6e-29 131.3 122 56.6
Ah.07g206800 Amaranthus hybridus HOM05D004739 ORTHO05D005784 8.6e-29 131.0 134 50.7
Sabra02G0178500 Salix brachista HOM05D004739 ORTHO05D005784 8.6e-29 131.0 122 55.7
Hund11729 Selenicereus undatus HOM05D004739 ORTHO05D005784 8.6e-29 131.0 123 54.5
Ciclev10004261m.g Citrus clementina HOM05D004739 ORTHO05D005784 1.5e-28 130.2 128 53.9
Peaxi162Scf00286g00338 Petunia axillaris HOM05D004739 ORTHO05D005784 1.5e-28 130.2 130 52.3
Oeu006039.1 Olea europaea HOM05D004739 ORTHO05D005784 1.9e-28 129.8 133 52.6
FvH4_4g12370 Fragaria vesca HOM05D004739 ORTHO05D005784 2.5e-28 129.4 134 52.2
AUR62031390 Chenopodium quinoa HOM05D004739 ORTHO05D005784 3.3e-28 129.0 155 46.5
CAN.G710.49 Capsicum annuum HOM05D004739 ORTHO05D005784 4.2e-28 128.6 130 53.1
Nitab4.5_0007057g0010 Nicotiana tabacum HOM05D004739 ORTHO05D005784 4.2e-28 128.6 130 53.8
Gohir.A03G095900 Gossypium hirsutum HOM05D004739 ORTHO05D005784 7.2e-28 127.9 128 55.5
Gohir.D02G113000 Gossypium hirsutum HOM05D004739 ORTHO05D005784 7.2e-28 127.9 128 55.5
Gorai.005G127900 Gossypium raimondii HOM05D004739 ORTHO05D005784 7.2e-28 127.9 128 55.5
HanXRQChr07g0204631 Helianthus annuus HOM05D004739 ORTHO05D005784 9.5e-28 127.5 134 53.7
Sed0003398 Sechium edule HOM05D004739 ORTHO05D005784 9.5e-28 127.5 134 50.7
Sc13g0008930 Simmondsia chinensis HOM05D004739 ORTHO05D005784 9.5e-28 127.5 126 53.2
AUR62021147 Chenopodium quinoa HOM05D004739 ORTHO05D005784 1.2e-27 127.1 155 45.8
Migut.N00187 Erythranthe guttata HOM05D004739 ORTHO05D005784 2.8e-27 125.9 132 51.5
Aqoxy2G04008 Aquilegia oxysepala HOM05D004739 ORTHO05D005784 6.1e-27 124.8 135 48.9
Lsat_1_v5_gn_1_69581 Lactuca sativa HOM05D004739 ORTHO05D005784 6.1e-27 124.8 134 53.0
FAN07G0434 Fragaria x ananassa HOM05D004739 ORTHO05D005784 8.0e-27 124.4 134 51.5
MELO3C022216.2 Cucumis melo HOM05D004739 ORTHO05D005784 1.0e-26 124.0 134 47.0
Duzib212G0770 Durio zibethinus HOM05D004739 ORTHO05D005784 1.0e-26 124.0 123 55.3
Prupe.1G176700 Prunus persica HOM05D004739 ORTHO05D005784 1.0e-26 124.0 134 50.7
EL10Ac3g05589 Beta vulgaris HOM05D004739 ORTHO05D005784 1.4e-26 123.6 125 53.6
DCAR_023801 Daucus carota HOM05D004739 ORTHO05D005784 2.3e-26 122.9 123 56.9
ECA248G0146 Erigeron canadensis HOM05D004739 ORTHO05D005784 2.3e-26 122.9 134 52.2
TWI73G0948 Tripterygium wilfordii HOM05D004739 ORTHO05D005784 5.2e-26 121.7 128 50.0
Manes.05G194701 Manihot esculenta HOM05D004739 ORTHO05D005784 1.2e-25 120.6 131 52.7
PSO017G5363 Papaver somniferum HOM05D004739 ORTHO05D005784 1.2e-25 120.6 120 50.8
PSO675G2609 Papaver somniferum HOM05D004739 ORTHO05D005784 2.6e-25 119.4 120 50.0
Lalb_Chr10g0092061 Lupinus albus HOM05D004739 ORTHO05D005784 3.4e-25 119.0 131 49.6
CsaV3_5G040440 Cucumis sativus L. HOM05D004739 ORTHO05D005784 4.4e-25 118.6 134 45.5
SalBow3G0652 Salvia bowleyana HOM05D004739 ORTHO05D005784 4.4e-25 118.6 133 51.9
QL06p027729 Quercus lobata HOM05D004739 ORTHO05D005784 7.5e-25 117.9 128 50.8
CANSAT78G1796 Cannabis sativa HOM05D004739 ORTHO05D005784 1.3e-24 117.1 132 47.0
CSS0043638 Camellia sinensis var. sinensis HOM05D004739 ORTHO05D005784 1.7e-24 116.7 103 62.1
THA.LOC104805833 Tarenaya hassleriana HOM05D004739 ORTHO05D005784 1.7e-24 116.7 121 52.1
Cc03_g10760 Coffea canephora HOM05D004739 ORTHO05D005784 2.2e-24 116.3 128 49.2
ClCG08G000320 Citrullus lanatus HOM05D004739 ORTHO05D005784 2.8e-24 115.9 121 54.5
MD09G1250400 Malus domestica HOM05D004739 ORTHO05D005784 2.8e-24 115.9 121 52.1
arahy.Tifrunner.gnm1.ann1.F9LJYJ Arachis hypogaea HOM05D004739 ORTHO05D005784 4.9e-24 115.2 128 47.7
arahy.Tifrunner.gnm1.ann1.WHDV72 Arachis hypogaea HOM05D004739 ORTHO05D005784 4.9e-24 115.2 128 47.7
MSTRG.24599 Avicennia marina HOM05D004739 ORTHO05D005784 4.9e-24 115.2 133 50.4
Aa31LG10G5400 Aethionema arabicum HOM05D004739 ORTHO05D005784 1.4e-23 113.6 123 50.4
MBI11_g12232_MAGBIO Magnolia biondii HOM05D004739 ORTHO05D005784 3.2e-23 112.5 122 46.7
Eucgr.H00464 Eucalyptus grandis HOM05D004739 ORTHO05D005784 9.2e-23 110.9 122 49.2
AL1G54960 Arabidopsis lyrata HOM05D004739 ORTHO05D005784 2.0e-22 109.8 124 48.4
Atru.BG.162.p Acer truncatum HOM05D004739 ORTHO05D005784 4.5e-22 108.6 98 62.2
A08p04770 Brassica napus HOM05D004739 ORTHO05D005784 5.9e-22 108.2 123 48.8
BcaC07g37141 Brassica carinata HOM05D004739 ORTHO05D005784 7.8e-22 107.8 123 48.8
C08p05140 Brassica napus HOM05D004739 ORTHO05D005784 7.8e-22 107.8 123 48.8
BolC8t47324H Brassica oleracea HOM05D004739 ORTHO05D005784 7.8e-22 107.8 123 48.8
CARHR037970 Cardamine hirsuta HOM05D004739 ORTHO05D005784 7.8e-22 107.8 123 48.0
Thhalv10011221m.g Eutrema salsugineum HOM05D004739 ORTHO05D005784 7.8e-22 107.8 123 48.8
Nitab4.5_0008073g0020 Nicotiana tabacum HOM05D004739 ORTHO05D005784 7.8e-22 107.8 130 50.0
ATR1145G086 Amborella trichopoda HOM05D004739 ORTHO05D005784 1.0e-21 107.5 121 44.6
AT1G48360 Arabidopsis thaliana HOM05D004739 ORTHO05D005784 2.9e-21 105.9 122 47.5
Sp1g35310 Schrenkiella parvula HOM05D004739 ORTHO05D005784 5.0e-21 105.1 123 45.5
Lj1g0022138 Lotus japonicus HOM05D004739 ORTHO05D005784 3.3e-20 102.4 131 43.5
Carub.0001s3748 Capsella rubella HOM05D004739 ORTHO05D005784 1.2e-19 100.5 123 45.5
Glyma.18G283900 Glycine max HOM05D004739 ORTHO05D005784 2.1e-19 99.8 123 46.3
Psat3g188160 Pisum sativum HOM05D004739 ORTHO05D005784 2.1e-19 99.8 135 42.2
Medtr7g022220 Medicago truncatula HOM05D004739 ORTHO05D005784 2.8e-19 99.4 131 42.7
BraA08t32506Z Brassica rapa HOM05D004739 ORTHO05D005784 4.7e-19 98.6 148 42.6
Os06g0171800 Oryza sativa ssp. japonica HOM05D004739 ORTHO05D005784 1.8e-18 96.7 135 40.7
Zm00001eb375390 Zea mays HOM05D004739 ORTHO05D005784 2.3e-18 96.3 135 42.2
VMungo1383G1195 Vigna mungo HOM05D004739 ORTHO05D005784 6.8e-18 94.7 123 45.5
HPP92_024254 Vanilla planifolia HOM05D004739 ORTHO05D005784 1.2e-17 94.0 118 42.4
Phvul.008G017600 Phaseolus vulgaris HOM05D004739 ORTHO05D005784 2.0e-17 93.2 123 45.5
TPR.G2943 Trifolium pratense HOM05D004739 ORTHO05D005784 2.0e-17 93.2 121 44.6
HPP92_024268 Vanilla planifolia HOM05D004739 ORTHO05D005784 1.3e-16 90.5 118 40.7
Glyma.08G259832 Glycine max HOM05D004739 ORTHO05D005784 1.7e-16 90.1 121 44.6
SGA_v2.0_scaffold550G52871 Striga asiatica HOM05D004739 ORTHO05D005784 1.7e-16 90.1 164 37.8
CSS0028447 Camellia sinensis var. sinensis HOM05D004739 ORTHO05D005784 6.4e-16 88.2 83 57.8
Dinv31047 Davidia involucrata HOM05D004739 ORTHO05D005784 1.4e-15 87.0 82 61.0
Dinv31053 Davidia involucrata HOM05D004739 ORTHO05D005784 1.4e-15 87.0 82 61.0
SEGI_11980 Sequoiadendron giganteum HOM05D004739 ORTHO05D005784 7.8e-14 81.3 134 38.8
FAN22G0233 Fragaria x ananassa HOM05D004739 ORTHO05D005784 3.3e-12 75.9 81 54.3
PGR142G4233 Punica granatum HOM05D004739 ORTHO05D005784 1.6e-11 73.6 100 42.0
Cpa.g.sc8.308 Carica papaya HOM05D004739 ORTHO05D005784 2.8e-11 72.8 75 54.7
unitig_8.g4743 Utricularia gibba HOM05D004739 ORTHO05D003440 4.7e-11 72.0 136 38.2
SMO327G0008 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 4.0e-10 68.9 99 38.4
SMO331G0087 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 5.2e-10 68.6 99 38.4
SMO110G0011 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 1.5e-09 67.0 96 37.5
BcaB04g17436 Brassica carinata HOM05D004739 ORTHO05D005784 5.8e-09 65.1 122 35.2
AagrBONN_evm.TU.Sc2ySwM_344.4128 Anthoceros agrestis HOM05D004739 ORTHO05D002352 9.8e-09 64.3 93 38.7
Pp3c5_2670 Physcomitrium patens HOM05D004739 ORTHO05D005784 9.8e-09 64.3 140 32.1
SHI06489 Sapria himalayana HOM05D004739 ORTHO05D000023 8.3e-08 61.2 75 44.0
Mapoly0005s0042 Marchantia polymorpha HOM05D004739 ORTHO05D005784 5.4e-07 58.5 96 37.5


User provided reference genes

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