Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C128G4 Lonicera japonica HOM05D004664 ORTHO05D005526 2.4e-112 409.1 238 100.0
Lj1A1166G81 Lonicera japonica HOM05D004664 ORTHO05D005526 7.2e-93 344.4 231 81.8
Dinv01695 Davidia involucrata HOM05D004664 ORTHO05D005526 6.0e-55 218.4 234 56.4
Dinv11048 Davidia involucrata HOM05D004664 ORTHO05D005526 3.0e-54 216.1 234 55.6
TAR636G0408 Trochodendron aralioides HOM05D004664 ORTHO05D005526 7.5e-42 174.9 228 46.9
Actinidia28954 Actinidia chinensis HOM05D004664 ORTHO05D005526 2.7e-39 166.4 225 47.1
TAR633G0600 Trochodendron aralioides HOM05D004664 ORTHO05D005526 3.3e-37 159.5 245 44.5
Hma1.2p1_0277F.1_g111600 Hydrangea macrophylla HOM05D004664 ORTHO05D005526 9.5e-37 157.9 232 46.1
Migut.H01639 Erythranthe guttata HOM05D004664 ORTHO05D005526 1.6e-36 157.1 226 47.8
SGA_v2.0_scaffold239G43984 Striga asiatica HOM05D004664 ORTHO05D005526 4.0e-35 152.5 234 45.7
GSVIVG01004331001 Vitis vinifera HOM05D004664 ORTHO05D005526 1.5e-34 150.6 233 45.5
PSO541G3178 Papaver somniferum HOM05D004664 ORTHO05D005526 9.9e-34 147.9 235 41.7
TWI38G1364 Tripterygium wilfordii HOM05D004664 ORTHO05D005526 2.2e-33 146.7 224 48.2
Cc09_g09380 Coffea canephora HOM05D004664 ORTHO05D005526 3.8e-33 146.0 224 45.1
PSO675G1009 Papaver somniferum HOM05D004664 ORTHO05D005526 3.8e-33 146.0 235 41.7
TWI63G0464 Tripterygium wilfordii HOM05D004664 ORTHO05D005526 3.8e-33 146.0 224 45.5
Nitab4.5_0009068g0020 Nicotiana tabacum HOM05D004664 ORTHO05D005526 8.4e-33 144.8 261 39.8
Prupe.3G183500 Prunus persica HOM05D004664 ORTHO05D005526 1.1e-32 144.4 225 40.9
Cc07_g14650 Coffea canephora HOM05D004664 ORTHO05D005526 1.4e-32 144.1 225 44.4
CiPaw.05G165700 Carya illinoinensis HOM05D004664 ORTHO05D005526 2.4e-32 143.3 235 42.1
CAN.G413.16 Capsicum annuum HOM05D004664 ORTHO05D005526 1.2e-31 141.0 226 42.5
Cfa002678 Carpinus fangiana HOM05D004664 ORTHO05D005526 1.2e-31 141.0 220 43.6
Sopen10g004780 Solanum pennellii HOM05D004664 ORTHO05D005526 2.1e-31 140.2 221 40.7
Solyc10g009000.4 Solanum lycopersicum HOM05D004664 ORTHO05D005526 4.6e-31 139.0 221 40.3
CAN.G567.108 Capsicum annuum HOM05D004664 ORTHO05D005526 2.3e-30 136.7 236 41.9
MD17G1131000 Malus domestica HOM05D004664 ORTHO05D005526 6.6e-30 135.2 235 45.5
Potri.015G143000 Populus trichocarpa HOM05D004664 ORTHO05D005526 1.5e-29 134.0 219 41.1
QL05p066226 Quercus lobata HOM05D004664 ORTHO05D005526 2.5e-29 133.3 219 42.9
MBI15_g26850_MAGBIO Magnolia biondii HOM05D004664 ORTHO05D005526 4.3e-29 132.5 230 50.4
Atru.chr1.2210 Acer truncatum HOM05D004664 ORTHO05D005526 1.8e-27 127.1 227 41.4
Haze_07058 Corylus avellana HOM05D004664 ORTHO05D005526 2.4e-27 126.7 220 43.2
PGSC0003DMG400022830 Solanum tuberosum HOM05D004664 ORTHO05D005526 3.1e-27 126.3 190 40.5
Nitab4.5_0003942g0040 Nicotiana tabacum HOM05D004664 ORTHO05D005526 4.0e-27 125.9 226 46.9
HanXRQChr15g0489541 Helianthus annuus HOM05D004664 ORTHO05D005526 1.5e-26 124.0 224 41.1
Lsat_1_v5_gn_4_109780 Lactuca sativa HOM05D004664 ORTHO05D005526 3.4e-26 122.9 216 39.8
ECA247G2196 Erigeron canadensis HOM05D004664 ORTHO05D005526 9.9e-26 121.3 225 40.4
ECA238G0224 Erigeron canadensis HOM05D004664 ORTHO05D005526 2.2e-25 120.2 225 40.4
EL10Ac3g07399 Beta vulgaris HOM05D004664 ORTHO05D005526 1.1e-24 117.9 229 38.9
MELO3C021804.2 Cucumis melo HOM05D004664 ORTHO05D005526 1.9e-24 117.1 217 35.9
Sc25g0005660 Simmondsia chinensis HOM05D004664 ORTHO05D005526 2.4e-24 116.7 238 47.1
Gorai.009G332500 Gossypium raimondii HOM05D004664 ORTHO05D005526 4.2e-24 115.9 230 38.7
Gohir.D05G311400 Gossypium hirsutum HOM05D004664 ORTHO05D005526 7.1e-24 115.2 230 38.7
Duzib268G1219 Durio zibethinus HOM05D004664 ORTHO05D005526 9.3e-24 114.8 232 38.8
MELO3C017782.2 Cucumis melo HOM05D004664 ORTHO05D005526 2.1e-23 113.6 217 35.5
Gohir.A05G310600 Gossypium hirsutum HOM05D004664 ORTHO05D005526 2.1e-23 113.6 234 39.3
AUR62028851 Chenopodium quinoa HOM05D004664 ORTHO05D005526 1.3e-22 110.9 228 38.6
Thecc.08G197000 Theobroma cacao HOM05D004664 ORTHO05D005526 1.3e-22 110.9 219 39.3
Actinidia19274 Actinidia chinensis HOM05D004664 ORTHO05D005526 1.7e-22 110.5 90 60.0
Cpa.g.sc27.187 Carica papaya HOM05D004664 ORTHO05D005526 3.0e-22 109.8 217 40.1
Ciclev10015263m.g Citrus clementina HOM05D004664 ORTHO05D005526 3.0e-22 109.8 224 36.6
COL.COLO4_20401 Corchorus olitorius HOM05D004664 ORTHO05D005526 3.9e-22 109.4 223 37.2
Phvul.003G154500 Phaseolus vulgaris HOM05D004664 ORTHO05D005526 3.9e-22 109.4 230 37.8
vmacro21384 Vaccinium macrocarpon HOM05D004664 ORTHO05D005526 3.9e-22 109.4 296 34.1
CsaV3_1G046480 Cucumis sativus L. HOM05D004664 ORTHO05D005526 1.5e-21 107.5 217 35.9
CANSAT64G2239 Cannabis sativa HOM05D004664 ORTHO05D005526 1.9e-21 107.1 289 30.4
Manes.08G015000 Manihot esculenta HOM05D004664 ORTHO05D005526 2.5e-21 106.7 240 43.3
CDE04G0808 Ceratophyllum demersum HOM05D004664 ORTHO05D005526 3.3e-21 106.3 221 37.6
PGR004G1760 Punica granatum HOM05D004664 ORTHO05D005526 5.6e-21 105.5 276 31.9
Hund19039 Selenicereus undatus HOM05D004664 ORTHO05D005526 5.6e-21 105.5 207 43.0
VMungo1215G0123 Vigna mungo HOM05D004664 ORTHO05D005526 2.1e-20 103.6 219 35.2
Nn1g08309 Nelumbo nucifera HOM05D004664 ORTHO05D005526 2.8e-20 103.2 96 56.2
FAN18G2840 Fragaria x ananassa HOM05D004664 ORTHO05D005526 3.6e-20 102.8 231 33.3
arahy.Tifrunner.gnm1.ann1.6YF458 Arachis hypogaea HOM05D004664 ORTHO05D005526 6.2e-20 102.1 220 35.0
AUR62005705 Chenopodium quinoa HOM05D004664 ORTHO05D005526 8.1e-20 101.7 225 37.8
arahy.Tifrunner.gnm1.ann1.U25ASJ Arachis hypogaea HOM05D004664 ORTHO05D005526 1.4e-19 100.9 220 35.0
Sabra08G0019200 Salix brachista HOM05D004664 ORTHO05D005526 1.8e-19 100.5 279 31.9
arahy.Tifrunner.gnm1.ann1.3Z2F0I Arachis hypogaea HOM05D004664 ORTHO05D005526 2.4e-19 100.1 220 36.4
GSVIVG01004440001 Vitis vinifera HOM05D004664 ORTHO05D005526 2.4e-19 100.1 101 54.5
Lj6g0004292 Lotus japonicus HOM05D004664 ORTHO05D005526 5.3e-19 99.0 222 35.1
HPP92_017531 Vanilla planifolia HOM05D004664 ORTHO05D005526 9.0e-19 98.2 228 37.3
Aqoxy1G03457 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 1.2e-18 97.8 216 36.1
Peaxi162Scf00530g00824 Petunia axillaris HOM05D004664 ORTHO05D005526 1.5e-18 97.4 172 40.7
BcaB03g12095 Brassica carinata HOM05D004664 ORTHO05D005526 2.0e-18 97.1 214 36.0
Sabra15G0152800 Salix brachista HOM05D007457 ORTHO05D006729 2.6e-18 96.7 94 54.3
Glyma.07G270100 Glycine max HOM05D004664 ORTHO05D005526 3.4e-18 96.3 230 33.9
Aqoxy5G01821 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 7.6e-18 95.1 217 33.6
Lj4g0012990 Lotus japonicus HOM05D004664 ORTHO05D005526 1.3e-17 94.4 222 33.3
RcHm_v2.0_Chr7g0230211 Rosa chinensis HOM05D004664 ORTHO05D005526 2.2e-17 93.6 227 34.8
TPR.G5994 Trifolium pratense HOM05D004664 ORTHO05D005526 2.2e-17 93.6 229 35.4
Ah.04g149850 Amaranthus hybridus HOM05D000997 ORTHO05D000828 3.8e-17 92.8 246 35.8
DCAR_024762 Daucus carota HOM05D004664 ORTHO05D005526 3.8e-17 92.8 338 29.6
unitig_22.g5707 Utricularia gibba HOM05D004664 ORTHO05D005526 3.8e-17 92.8 103 50.5
BolC3t19796H Brassica oleracea HOM05D004664 ORTHO05D005526 6.4e-17 92.0 224 34.4
ECA238G4413 Erigeron canadensis HOM05D004664 ORTHO05D005526 1.1e-16 91.3 211 38.4
Rhsim06G0067400 Rhododendron simsii HOM05D004664 ORTHO05D005526 1.4e-16 90.9 138 43.5
ECA237G0001 Erigeron canadensis HOM05D004664 ORTHO05D005526 1.9e-16 90.5 87 54.0
CiPaw.09G112900 Carya illinoinensis HOM05D004664 ORTHO05D005526 2.4e-16 90.1 179 36.3
Medtr1g043000 Medicago truncatula HOM05D004664 ORTHO05D005526 2.4e-16 90.1 221 33.9
FAN05G0490 Fragaria x ananassa HOM05D004664 ORTHO05D005526 3.2e-16 89.7 267 30.3
C03p75380 Brassica napus HOM05D004664 ORTHO05D005526 4.2e-16 89.4 224 33.9
RcHm_v2.0_Chr2g0153021 Rosa chinensis HOM05D004664 ORTHO05D005526 4.2e-16 89.4 93 49.5
GSVIVG01004113001 Vitis vinifera HOM05D004664 ORTHO05D005526 4.2e-16 89.4 84 57.1
FAN14G0080 Fragaria x ananassa HOM05D004664 ORTHO05D005526 5.4e-16 89.0 118 40.7
DCAR_031515 Daucus carota HOM05D004664 ORTHO05D005526 9.3e-16 88.2 185 38.4
FAN02G1202 Fragaria x ananassa HOM05D004664 ORTHO05D005526 1.2e-15 87.8 118 41.5
Medtr4g064230 Medicago truncatula HOM05D004664 ORTHO05D005526 7.9e-15 85.1 221 33.0
Aa31LG6G11170 Aethionema arabicum HOM05D004664 ORTHO05D005526 1.8e-14 84.0 213 29.1
THA.LOC104809221 Tarenaya hassleriana HOM05D004664 ORTHO05D005526 1.8e-14 84.0 224 30.4
FvH4_6g39210 Fragaria vesca HOM05D004664 ORTHO05D005526 3.0e-14 83.2 332 25.9
A08p25430 Brassica napus HOM05D004664 ORTHO05D005526 5.1e-14 82.4 224 34.8
Carub.0004s0328 Capsella rubella HOM05D004664 ORTHO05D005526 5.1e-14 82.4 208 30.3
Lalb_Chr04g0264741 Lupinus albus HOM05D004664 ORTHO05D005526 5.1e-14 82.4 225 31.1
BcaC01g00070 Brassica carinata HOM05D004664 ORTHO05D005526 6.7e-14 82.0 209 39.7
THA.LOC104803679 Tarenaya hassleriana HOM05D004664 ORTHO05D005526 8.7e-14 81.6 224 31.2
BraA08t34494Z Brassica rapa HOM05D004664 ORTHO05D005526 2.5e-13 80.1 208 35.6
CARHR028060 Cardamine hirsuta HOM05D004664 ORTHO05D005526 7.4e-13 78.6 208 38.9
Ca_04223_v3 Cicer arietinum L. HOM05D004664 ORTHO05D005526 7.4e-13 78.6 227 32.6
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 1.3e-12 77.8 262 30.2
Medtr4g134340 Medicago truncatula HOM05D004664 ORTHO05D005526 2.8e-12 76.6 222 31.1
SEGI_33972 Sequoiadendron giganteum HOM05D004664 ORTHO05D005526 1.8e-11 73.9 222 29.7
ClCG01G009110 Citrullus lanatus HOM05D004664 ORTHO05D005526 2.4e-11 73.6 189 31.2
Psat0s2550g0080 Pisum sativum HOM05D004664 ORTHO05D005526 2.4e-11 73.6 224 29.9
Actinidia04550 Actinidia chinensis HOM05D004664 ORTHO05D005526 4.0e-11 72.8 143 37.8
Medtr8g042940 Medicago truncatula HOM05D004664 ORTHO05D005526 9.0e-11 71.6 229 29.7
ATR0751G240 Amborella trichopoda HOM05D004664 ORTHO05D005526 1.2e-10 71.2 168 35.1
Oeu016938.2 Olea europaea HOM05D004664 ORTHO05D005526 2.6e-10 70.1 72 61.1
Sp5g19680 Schrenkiella parvula HOM05D004664 ORTHO05D005526 7.6e-10 68.6 194 30.4
CSS0008447 Camellia sinensis var. sinensis HOM05D004664 ORTHO05D005526 3.8e-09 66.2 46 65.2
CSS0003336 Camellia sinensis var. sinensis HOM05D004664 ORTHO05D005526 5.5e-08 62.4 130 41.5
Eucgr.D00971 Eucalyptus grandis HOM05D004664 ORTHO05D005526 3.0e-06 56.6 156 34.0


User provided reference genes

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