Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A706T55 Lonicera japonica HOM05D000515 ORTHO05D019457 1.7e-224 782.3 396 100.0
vmacro16006 Vaccinium macrocarpon HOM05D000515 ORTHO05D001911 2.0e-47 194.1 328 44.2
Dinv17734 Davidia involucrata HOM05D000515 ORTHO05D001911 1.6e-41 174.5 270 46.3
RhsimUnG0102500 Rhododendron simsii HOM05D000515 ORTHO05D001911 2.4e-40 170.6 289 42.6
Hma1.2p1_0413F.1_g147360 Hydrangea macrophylla HOM05D000515 ORTHO05D001911 2.6e-39 167.2 350 38.0
Haze_17407 Corylus avellana HOM05D000515 ORTHO05D001911 5.3e-32 142.9 349 35.0
Dinv18827 Davidia involucrata HOM05D000515 ORTHO05D001911 3.4e-31 140.2 137 56.2
Prupe.1G350600 Prunus persica HOM05D000515 ORTHO05D001911 3.2e-29 133.7 329 34.0
Actinidia04091 Actinidia chinensis HOM05D035463 ORTHO05D019457 2.1e-28 131.0 270 38.5
Migut.J00013 Erythranthe guttata HOM05D000515 ORTHO05D001911 3.0e-27 127.1 327 34.6
MD13G1002000 Malus domestica HOM05D000515 ORTHO05D001911 2.8e-25 120.6 312 33.3
Lj3C845T16 Lonicera japonica HOM05D000515 ORTHO05D001911 1.1e-24 118.6 271 37.3
CiPaw.16G001400 Carya illinoinensis HOM05D000515 ORTHO05D001911 9.0e-24 115.5 222 41.4
Peaxi162Scf00900g00113 Petunia axillaris HOM05D000515 ORTHO05D001911 2.0e-23 114.4 231 38.1
Thecc.02G153400 Theobroma cacao HOM05D000515 ORTHO05D001911 2.0e-23 114.4 347 32.9
Nitab4.5_0000139g0020 Nicotiana tabacum HOM05D000515 ORTHO05D001911 2.6e-23 114.0 231 38.5
QL01p000485 Quercus lobata HOM05D000515 ORTHO05D001911 4.5e-23 113.2 284 35.6
QL01p000579 Quercus lobata HOM05D000515 ORTHO05D001911 4.5e-23 113.2 284 35.6
GSVIVG01034370001 Vitis vinifera HOM05D000515 ORTHO05D001911 1.3e-22 111.7 233 40.8
COL.COLO4_33128 Corchorus olitorius HOM05D000515 ORTHO05D001911 2.9e-22 110.5 348 34.2
Solyc02g050280.4 Solanum lycopersicum HOM05D000515 ORTHO05D001911 2.9e-22 110.5 219 37.9
Sopen02g008610 Solanum pennellii HOM05D000515 ORTHO05D001911 5.0e-22 109.8 219 37.9
TWI74G1094 Tripterygium wilfordii HOM05D000515 ORTHO05D001911 5.0e-22 109.8 344 33.1
CAN.G187.4 Capsicum annuum HOM05D000515 ORTHO05D001911 1.1e-21 108.6 310 32.6
CiPaw.15G001200 Carya illinoinensis HOM05D000515 ORTHO05D001911 3.2e-21 107.1 317 32.5
Duzib052G0949 Durio zibethinus HOM05D000515 ORTHO05D001911 3.2e-21 107.1 342 31.9
Manes.04G162000 Manihot esculenta HOM05D000515 ORTHO05D001911 2.7e-20 104.0 278 35.3
Ciclev10030591m.g Citrus clementina HOM05D000515 ORTHO05D001911 6.1e-20 102.8 301 32.2
DCAR_023490 Daucus carota HOM05D000515 ORTHO05D019457 5.1e-19 99.8 317 31.2
RcHm_v2.0_Chr4g0447091 Rosa chinensis HOM05D000515 ORTHO05D001911 5.1e-19 99.8 308 31.8
MSTRG.18929 Avicennia marina HOM05D000515 ORTHO05D001911 8.8e-19 99.0 273 35.2
Lalb_Chr02g0143751 Lupinus albus HOM05D000515 ORTHO05D001911 2.5e-18 97.4 339 30.4
Nitab4.5_0006537g0010 Nicotiana tabacum HOM05D000515 ORTHO05D001911 3.3e-18 97.1 236 34.7
Oeu035179.1 Olea europaea HOM05D000515 ORTHO05D001911 3.3e-18 97.1 260 36.5
FAN17G2470 Fragaria x ananassa HOM05D000515 ORTHO05D001911 1.3e-17 95.1 308 30.8
Aqoxy4G00480 Aquilegia oxysepala HOM05D000515 ORTHO05D001911 8.2e-17 92.4 353 29.5
Potri.007G000700 Populus trichocarpa HOM05D000515 ORTHO05D001911 8.2e-17 92.4 291 32.6
Atru.chr11.1258 Acer truncatum HOM05D000515 ORTHO05D001911 1.1e-16 92.0 265 32.1
Eucgr.J00340 Eucalyptus grandis HOM05D000515 ORTHO05D001911 1.1e-16 92.0 339 31.9
Sed0025729 Sechium edule HOM05D000515 ORTHO05D001911 1.4e-16 91.7 262 35.5
TPR.G4136 Trifolium pratense HOM05D000515 ORTHO05D001911 2.4e-16 90.9 327 31.5
Oeu026933.1 Olea europaea HOM05D000515 ORTHO05D001911 5.3e-16 89.7 263 36.1
Ca_11273_v3 Cicer arietinum L. HOM05D000515 ORTHO05D001911 6.9e-16 89.4 325 29.5
Gohir.A04G109472 Gossypium hirsutum HOM05D000515 ORTHO05D001911 3.4e-15 87.0 275 31.6
Lalb_Chr21g0307081 Lupinus albus HOM05D000515 ORTHO05D001911 4.5e-15 86.7 236 33.9
Gorai.012G136000 Gossypium raimondii HOM05D000515 ORTHO05D001911 7.7e-15 85.9 282 31.2
TAR629G3384 Trochodendron aralioides HOM05D000515 ORTHO05D001911 7.7e-15 85.9 332 30.1
Medtr1g115215 Medicago truncatula HOM05D000515 ORTHO05D001911 1.0e-14 85.5 319 31.0
Nn4g25173 Nelumbo nucifera HOM05D000515 ORTHO05D001911 1.0e-14 85.5 326 28.5
FAN07G0234 Fragaria x ananassa HOM05D000515 ORTHO05D001911 1.7e-14 84.7 302 28.8
Sp3g18040 Schrenkiella parvula HOM05D000515 ORTHO05D001911 2.9e-14 84.0 224 34.4
Gorai.005G213400 Gossypium raimondii HOM05D000515 ORTHO05D001911 5.0e-14 83.2 284 29.9
Hund08679 Selenicereus undatus HOM05D000515 ORTHO05D001911 5.0e-14 83.2 328 33.5
Gohir.D04G149500 Gossypium hirsutum HOM05D000515 ORTHO05D001911 8.5e-14 82.4 275 30.9
SGA_v2.0_scaffold373G50194 Striga asiatica HOM05D000515 ORTHO05D001911 8.5e-14 82.4 280 32.1
arahy.Tifrunner.gnm1.ann1.FT35RV Arachis hypogaea HOM05D000515 ORTHO05D001911 1.1e-13 82.0 338 29.9
Glyma.20G100800 Glycine max HOM05D000515 ORTHO05D001911 1.4e-13 81.6 236 33.1
Gohir.D02G190700 Gossypium hirsutum HOM05D000515 ORTHO05D001911 1.4e-13 81.6 283 30.0
arahy.Tifrunner.gnm1.ann1.GXB7IN Arachis hypogaea HOM05D000515 ORTHO05D001911 2.5e-13 80.9 338 29.9
Gohir.A03G167600 Gossypium hirsutum HOM05D000515 ORTHO05D001911 3.2e-13 80.5 283 29.7
Lalb_Chr06g0164041 Lupinus albus HOM05D000515 ORTHO05D001911 3.2e-13 80.5 228 30.3
MD00G1127300 Malus domestica HOM05D000515 ORTHO05D001911 3.2e-13 80.5 259 30.1
ClCG01G008000 Citrullus lanatus HOM05D000515 ORTHO05D001911 4.2e-13 80.1 265 33.2
BcaB06g26071 Brassica carinata HOM05D000515 ORTHO05D001911 5.5e-13 79.7 206 35.0
PSO063G4682 Papaver somniferum HOM05D000515 ORTHO05D001911 7.2e-13 79.3 291 30.6
Glyma.10G288200 Glycine max HOM05D000515 ORTHO05D001911 2.1e-12 77.8 236 33.1
CANSAT78G1760 Cannabis sativa HOM05D000515 ORTHO05D001911 2.7e-12 77.4 278 31.7
THA.LOC104805800 Tarenaya hassleriana HOM05D000515 ORTHO05D001911 7.9e-12 75.9 204 32.4
ECA233G4613 Erigeron canadensis HOM05D000515 ORTHO05D001911 1.0e-11 75.5 261 33.0
SalBow5G2171 Salvia bowleyana HOM05D000515 ORTHO05D001911 1.0e-11 75.5 334 29.6
Sc10g0006620 Simmondsia chinensis HOM05D000515 ORTHO05D001911 2.3e-11 74.3 279 31.5
PSO782G1560 Papaver somniferum HOM05D000515 ORTHO05D001911 3.9e-11 73.6 292 29.1
CsaV3_5G021860 Cucumis sativus L. HOM05D000515 ORTHO05D001911 3.3e-10 70.5 263 33.5
AT1G50410 Arabidopsis thaliana HOM05D000515 ORTHO05D001911 4.4e-10 70.1 136 35.3
BolC5t33174H Brassica oleracea HOM05D000515 ORTHO05D001911 4.4e-10 70.1 229 33.6
Cc11_g01110 Coffea canephora HOM05D035463 ORTHO05D019457 4.4e-10 70.1 351 29.9
Aqoxy3G04320 Aquilegia oxysepala HOM05D000515 ORTHO05D001911 5.7e-10 69.7 137 35.0
BcaC05g28372 Brassica carinata HOM05D000515 ORTHO05D001911 7.4e-10 69.3 229 33.6
Actinidia04363 Actinidia chinensis HOM05D035463 ORTHO05D019457 9.7e-10 68.9 165 36.4
C05p44510 Brassica napus HOM05D000515 ORTHO05D001911 1.3e-09 68.6 229 33.6
Carub.0003s1991 Capsella rubella HOM05D000515 ORTHO05D001911 1.3e-09 68.6 145 36.6
Sp1g37240 Schrenkiella parvula HOM05D000515 ORTHO05D001911 2.8e-09 67.4 124 37.1
VMungo0331G0968 Vigna mungo HOM05D000515 ORTHO05D001911 3.7e-09 67.0 263 29.3
Lsat_1_v5_gn_8_33380 Lactuca sativa HOM05D000515 ORTHO05D001911 4.8e-09 66.6 250 33.2
A05p29090 Brassica napus HOM05D000515 ORTHO05D001911 1.4e-08 65.1 208 31.2
CARHR095540 Cardamine hirsuta HOM05D000515 ORTHO05D001911 2.4e-08 64.3 53 56.6
AUR62032908 Chenopodium quinoa HOM05D000515 ORTHO05D001911 2.4e-08 64.3 321 30.5
A10p26900 Brassica napus HOM05D044348 ORTHO05D019457 3.1e-08 63.9 56 50.0
BraA10t43922Z Brassica rapa HOM05D044348 ORTHO05D019457 3.1e-08 63.9 56 50.0
MELO3C005080.2 Cucumis melo HOM05D000515 ORTHO05D001911 3.1e-08 63.9 264 31.4
BraA05t21793Z Brassica rapa HOM05D000515 ORTHO05D001911 4.1e-08 63.5 206 29.6
BraA06t23527Z Brassica rapa HOM05D000515 ORTHO05D001911 4.1e-08 63.5 127 37.0
Thhalv10020061m.g Eutrema salsugineum HOM05D000515 ORTHO05D001911 4.1e-08 63.5 53 54.7
FvH4_4g37270 Fragaria vesca HOM05D000515 ORTHO05D001911 4.1e-08 63.5 248 30.2
Phvul.007G012900 Phaseolus vulgaris HOM05D000515 ORTHO05D001911 9.1e-08 62.4 151 32.5
AL3G33660 Arabidopsis lyrata HOM05D000515 ORTHO05D001911 2.6e-07 60.8 229 28.4
A03p41530 Brassica napus HOM05D000515 ORTHO05D001911 2.6e-07 60.8 182 29.7
C06p05620 Brassica napus HOM05D000515 ORTHO05D001911 4.5e-07 60.1 121 36.4
BolC6t35669H Brassica oleracea HOM05D000515 ORTHO05D001911 4.5e-07 60.1 121 36.4
VMungo0720G2951 Vigna mungo HOM05D000515 ORTHO05D001911 4.5e-07 60.1 228 29.4
Lj5g0024109 Lotus japonicus HOM05D000515 ORTHO05D001911 7.7e-07 59.3 335 27.8
HanXRQChr12g0366201 Helianthus annuus HOM05D000515 ORTHO05D001911 1.3e-06 58.5 123 39.0
A06p03140 Brassica napus HOM05D000515 ORTHO05D001911 2.2e-06 57.8 188 29.8
CARHR040420 Cardamine hirsuta HOM05D000515 ORTHO05D001911 2.9e-06 57.4 265 32.1
EL10Ac9g23009 Beta vulgaris HOM05D000515 ORTHO05D001911 3.8e-06 57.0 322 25.2
AL1G58050 Arabidopsis lyrata HOM05D000515 ORTHO05D001911 5.0e-06 56.6 212 28.8
MBI06_g44234_MAGBIO Magnolia biondii HOM05D000515 ORTHO05D001911 8.5e-06 55.8 51 54.9


User provided reference genes

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