Gene: TPR.G4136

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G4136
  • Transcript Identifier TPR.T4267
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG6 : 5104438-5111190 : positive

Gene Family Information

  • ID HOM05D000515
  • #Genes/#Species 1048/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA4267.v2
  • id Tp57577_TGAC_v2_gene4136.v2
  • pacid 35975330
  • uniprot A0A2K3NM29

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080188
ISO
PLAZA Integrative Orthologygene silencing by RNA-directed DNA methylation AT3G20010

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
GOA Databasenucleosome-dependent ATPase activity
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G20010

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR018957 Zinc finger, C3HC4 RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR038718 SNF2-like, N-terminal domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR000330 SNF2, N-terminal
IPR001841 Zinc finger, RING-type
Mapman id Description
12.4.8.3.3 Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Ris1)