Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A353T82 Lonicera japonica HOM05D004739 ORTHO05D005784 1.4e-62 242.7 117 100.0
Lj6A353T83 Lonicera japonica HOM05D004739 ORTHO05D005784 1.0e-52 209.9 107 95.3
Lj6C358T14 Lonicera japonica HOM05D004739 ORTHO05D005784 5.2e-52 207.6 107 94.4
ECA248G0146 Erigeron canadensis HOM05D004739 ORTHO05D005784 2.3e-44 182.2 106 80.2
TWI73G0948 Tripterygium wilfordii HOM05D004739 ORTHO05D005784 4.0e-44 181.4 106 84.0
HanXRQChr07g0204631 Helianthus annuus HOM05D004739 ORTHO05D005784 8.8e-44 180.3 106 79.2
Peaxi162Scf00286g00338 Petunia axillaris HOM05D004739 ORTHO05D005784 3.4e-43 178.3 107 79.4
Rhsim02G0071300 Rhododendron simsii HOM05D004739 ORTHO05D005784 1.7e-42 176.0 106 80.2
Actinidia38940 Actinidia chinensis HOM05D004739 ORTHO05D005784 2.8e-42 175.3 106 81.1
CSS0046373 Camellia sinensis var. sinensis HOM05D004739 ORTHO05D005784 2.8e-42 175.3 106 76.4
DCAR_023801 Daucus carota HOM05D004739 ORTHO05D005784 4.8e-42 174.5 106 77.4
Hma1.2p1_1286F.1_g273220 Hydrangea macrophylla HOM05D004739 ORTHO05D005784 4.8e-42 174.5 106 80.2
Hma1.2p1_1286F.1_g273230 Hydrangea macrophylla HOM05D004739 ORTHO05D005784 4.8e-42 174.5 106 80.2
Gohir.D02G113000 Gossypium hirsutum HOM05D004739 ORTHO05D005784 6.3e-42 174.1 105 81.0
RcHm_v2.0_Chr4g0410481 Rosa chinensis HOM05D004739 ORTHO05D005784 6.3e-42 174.1 105 82.9
Solyc09g098370.4 Solanum lycopersicum HOM05D004739 ORTHO05D005784 6.3e-42 174.1 106 78.3
Gorai.005G127900 Gossypium raimondii HOM05D004739 ORTHO05D005784 8.3e-42 173.7 105 80.0
MSTRG.24599 Avicennia marina HOM05D004739 ORTHO05D005784 1.1e-41 173.3 108 75.9
Eucgr.H00464 Eucalyptus grandis HOM05D004739 ORTHO05D005784 1.1e-41 173.3 105 79.0
SalBow3G0652 Salvia bowleyana HOM05D004739 ORTHO05D005784 1.1e-41 173.3 105 80.0
Atru.BG.162.p Acer truncatum HOM05D004739 ORTHO05D005784 1.4e-41 172.9 108 77.8
CAN.G710.49 Capsicum annuum HOM05D004739 ORTHO05D005784 1.4e-41 172.9 106 74.5
Migut.N00187 Erythranthe guttata HOM05D004739 ORTHO05D005784 1.4e-41 172.9 105 80.0
QL06p027729 Quercus lobata HOM05D004739 ORTHO05D005784 1.8e-41 172.6 105 81.0
Sopen09g036290 Solanum pennellii HOM05D004739 ORTHO05D005784 2.4e-41 172.2 106 77.4
Cc03_g10760 Coffea canephora HOM05D004739 ORTHO05D005784 3.1e-41 171.8 108 77.8
Lsat_1_v5_gn_1_69581 Lactuca sativa HOM05D004739 ORTHO05D005784 3.1e-41 171.8 106 76.4
vmacro15619 Vaccinium macrocarpon HOM05D004739 ORTHO05D005784 4.1e-41 171.4 106 79.2
Sc13g0008930 Simmondsia chinensis HOM05D004739 ORTHO05D005784 5.4e-41 171.0 105 78.1
TAR365G0018 Trochodendron aralioides HOM05D004739 ORTHO05D005784 5.4e-41 171.0 106 79.2
GSVIVG01031656001 Vitis vinifera HOM05D004739 ORTHO05D005784 5.4e-41 171.0 106 79.2
FvH4_4g12370 Fragaria vesca HOM05D004739 ORTHO05D005784 7.0e-41 170.6 105 80.0
Cpa.g.sc8.308 Carica papaya HOM05D004739 ORTHO05D005784 1.2e-40 169.9 106 77.4
COL.COLO4_08079 Corchorus olitorius HOM05D004739 ORTHO05D005784 1.6e-40 169.5 105 78.1
Aqoxy2G04008 Aquilegia oxysepala HOM05D004739 ORTHO05D005784 2.0e-40 169.1 108 75.0
Duzib212G0770 Durio zibethinus HOM05D004739 ORTHO05D005784 4.5e-40 167.9 105 78.1
CANSAT78G1796 Cannabis sativa HOM05D004739 ORTHO05D005784 5.9e-40 167.5 105 77.1
Thecc.04G186700 Theobroma cacao HOM05D004739 ORTHO05D005784 1.0e-39 166.8 105 77.1
Hund11729 Selenicereus undatus HOM05D004739 ORTHO05D005784 1.7e-39 166.0 109 74.3
AUR62021147 Chenopodium quinoa HOM05D004739 ORTHO05D005784 2.3e-39 165.6 105 77.1
Cfa015247 Carpinus fangiana HOM05D004739 ORTHO05D005784 2.9e-39 165.2 102 81.4
MD00G1163900 Malus domestica HOM05D004739 ORTHO05D005784 2.9e-39 165.2 105 77.1
Sabra02G0178500 Salix brachista HOM05D004739 ORTHO05D005784 2.9e-39 165.2 105 76.2
MELO3C022216.2 Cucumis melo HOM05D004739 ORTHO05D005784 5.0e-39 164.5 113 71.7
PSO675G2609 Papaver somniferum HOM05D004739 ORTHO05D005784 5.0e-39 164.5 105 74.3
PSO017G5363 Papaver somniferum HOM05D004739 ORTHO05D005784 6.6e-39 164.1 105 74.3
Nitab4.5_0007057g0010 Nicotiana tabacum HOM05D004739 ORTHO05D005784 8.6e-39 163.7 122 67.2
Manes.05G194701 Manihot esculenta HOM05D004739 ORTHO05D005784 1.1e-38 163.3 105 76.2
Potri.002G233800 Populus trichocarpa HOM05D004739 ORTHO05D005784 1.1e-38 163.3 105 76.2
unitig_8.g4743 Utricularia gibba HOM05D004739 ORTHO05D003440 1.1e-38 163.3 104 76.0
BcaB04g17436 Brassica carinata HOM05D004739 ORTHO05D005784 1.5e-38 162.9 111 68.5
AUR62031390 Chenopodium quinoa HOM05D004739 ORTHO05D005784 1.5e-38 162.9 105 76.2
CsaV3_5G040440 Cucumis sativus L. HOM05D004739 ORTHO05D005784 1.5e-38 162.9 106 73.6
PGR142G4233 Punica granatum HOM05D004739 ORTHO05D005784 2.5e-38 162.2 105 75.2
Aa31LG10G5400 Aethionema arabicum HOM05D004739 ORTHO05D005784 3.3e-38 161.8 105 73.3
Sed0003398 Sechium edule HOM05D004739 ORTHO05D005784 3.3e-38 161.8 113 70.8
Carub.0001s3748 Capsella rubella HOM05D004739 ORTHO05D005784 5.5e-38 161.0 111 69.4
Ah.07g206800 Amaranthus hybridus HOM05D004739 ORTHO05D005784 7.2e-38 160.6 105 73.3
arahy.Tifrunner.gnm1.ann1.F9LJYJ Arachis hypogaea HOM05D004739 ORTHO05D005784 7.2e-38 160.6 105 76.2
arahy.Tifrunner.gnm1.ann1.WHDV72 Arachis hypogaea HOM05D004739 ORTHO05D005784 7.2e-38 160.6 105 76.2
ClCG08G000320 Citrullus lanatus HOM05D004739 ORTHO05D005784 7.2e-38 160.6 113 69.9
A08p04770 Brassica napus HOM05D004739 ORTHO05D005784 9.5e-38 160.2 111 69.4
BraA08t32506Z Brassica rapa HOM05D004739 ORTHO05D005784 9.5e-38 160.2 111 69.4
MBI11_g12232_MAGBIO Magnolia biondii HOM05D004739 ORTHO05D005784 1.2e-37 159.8 106 73.6
AL1G54960 Arabidopsis lyrata HOM05D004739 ORTHO05D005784 1.6e-37 159.5 111 69.4
Ciclev10004261m.g Citrus clementina HOM05D004739 ORTHO05D005784 1.6e-37 159.5 105 75.2
THA.LOC104805833 Tarenaya hassleriana HOM05D004739 ORTHO05D005784 2.1e-37 159.1 105 69.5
Sp1g35310 Schrenkiella parvula HOM05D004739 ORTHO05D005784 4.7e-37 157.9 105 71.4
Lj1g0022138 Lotus japonicus HOM05D004739 ORTHO05D005784 8.0e-37 157.1 105 73.3
C08p05140 Brassica napus HOM05D004739 ORTHO05D005784 1.8e-36 156.0 111 67.6
BolC8t47324H Brassica oleracea HOM05D004739 ORTHO05D005784 3.0e-36 155.2 111 67.6
BcaC07g37141 Brassica carinata HOM05D004739 ORTHO05D005784 5.2e-36 154.5 111 67.6
Thhalv10011221m.g Eutrema salsugineum HOM05D004739 ORTHO05D005784 1.2e-35 153.3 105 70.5
FAN07G0434 Fragaria x ananassa HOM05D004739 ORTHO05D005784 1.5e-35 152.9 108 72.2
Os06g0171800 Oryza sativa ssp. japonica HOM05D004739 ORTHO05D005784 1.5e-35 152.9 106 67.9
TPR.G22177 Trifolium pratense HOM05D004739 ORTHO05D005784 1.5e-35 152.9 105 71.4
FAN12G0062 Fragaria x ananassa HOM05D004739 ORTHO05D005784 2.0e-35 152.5 105 74.3
FAN12G0551 Fragaria x ananassa HOM05D004739 ORTHO05D005784 2.0e-35 152.5 105 74.3
Medtr7g022220 Medicago truncatula HOM05D004739 ORTHO05D005784 2.0e-35 152.5 105 69.5
SMO203G0018 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 2.0e-35 152.5 104 66.3
SMO327G0027 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 2.0e-35 152.5 104 66.3
SMO110G0012 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 3.4e-35 151.8 104 66.3
SMO331G0087 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 3.4e-35 151.8 104 65.4
FAN22G0233 Fragaria x ananassa HOM05D004739 ORTHO05D005784 5.7e-35 151.0 105 74.3
Lalb_Chr10g0092061 Lupinus albus HOM05D004739 ORTHO05D005784 5.7e-35 151.0 105 70.5
SMO331G0089 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 7.5e-35 150.6 104 65.4
CDE02G3320 Ceratophyllum demersum HOM05D004739 ORTHO05D005784 9.8e-35 150.2 112 64.3
Psat3g188160 Pisum sativum HOM05D004739 ORTHO05D005784 9.8e-35 150.2 105 70.5
VMungo1383G1195 Vigna mungo HOM05D004739 ORTHO05D005784 1.7e-34 149.4 105 68.6
Mapoly0005s0042 Marchantia polymorpha HOM05D004739 ORTHO05D005784 2.2e-34 149.1 106 66.0
Ca_07125_v3 Cicer arietinum L. HOM05D004739 ORTHO05D005784 2.8e-34 148.7 105 68.6
Pp3c5_2670 Physcomitrium patens HOM05D004739 ORTHO05D005784 2.8e-34 148.7 98 69.4
Phvul.008G017600 Phaseolus vulgaris HOM05D004739 ORTHO05D005784 8.3e-34 147.1 105 67.6
ATR1145G086 Amborella trichopoda HOM05D004739 ORTHO05D005784 1.4e-33 146.4 105 63.8
Glyma.18G283900 Glycine max HOM05D004739 ORTHO05D005784 1.8e-33 146.0 105 67.6
HPP92_024254 Vanilla planifolia HOM05D004739 ORTHO05D005784 1.8e-33 146.0 106 66.0
HPP92_024268 Vanilla planifolia HOM05D004739 ORTHO05D005784 1.8e-33 146.0 106 65.1
AagrBONN_evm.TU.Sc2ySwM_344.4128 Anthoceros agrestis HOM05D004739 ORTHO05D002352 2.4e-33 145.6 95 69.5
SMO327G0004 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 2.4e-33 145.6 104 64.4
CBR_g39432 Chara braunii HOM05D004739 ORTHO05D005784 4.1e-33 144.8 104 64.4
SEGI_11980 Sequoiadendron giganteum HOM05D004739 ORTHO05D005784 7.0e-33 144.1 105 64.8
Zm00001eb375390 Zea mays HOM05D004739 ORTHO05D005784 2.7e-32 142.1 106 61.3
SMO252G0014 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 1.3e-31 139.8 100 63.0
Glyma.08G259832 Glycine max HOM05D004739 ORTHO05D005784 1.6e-29 132.9 93 69.9
SGA_v2.0_scaffold550G52871 Striga asiatica HOM05D004739 ORTHO05D005784 5.2e-28 127.9 106 60.4
CiPaw.01G109700 Carya illinoinensis HOM05D004739 ORTHO05D005784 8.3e-26 120.6 67 83.6
AT1G48360 Arabidopsis thaliana HOM05D004739 ORTHO05D005784 2.0e-24 115.9 73 74.0
SMO252G0017 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 2.0e-24 115.9 84 61.9
MD09G1250400 Malus domestica HOM05D004739 ORTHO05D005784 2.7e-24 115.5 105 61.9
Oeu006039.1 Olea europaea HOM05D004739 ORTHO05D005784 4.6e-24 114.8 72 77.8
SMO110G0011 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 4.6e-24 114.8 69 71.0
SMO327G0008 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 4.6e-24 114.8 69 71.0
CSS0028447 Camellia sinensis var. sinensis HOM05D004739 ORTHO05D005784 3.6e-21 105.1 62 77.4
Cre16.g660350 Chlamydomonas reinhardtii HOM05D004739 ORTHO05D005784 1.8e-20 102.8 88 51.1
FAN17G2248 Fragaria x ananassa HOM05D004739 ORTHO05D005784 9.8e-19 97.1 107 54.2
PRCOL_00003987 Prasinoderma coloniale HOM05D004739 ORTHO05D005784 4.1e-17 91.7 101 43.6
PGSC0003DMG400021624 Solanum tuberosum HOM05D004739 ORTHO05D005784 2.1e-16 89.4 56 73.2
EL10Ac3g05589 Beta vulgaris HOM05D004739 ORTHO05D005784 1.3e-15 86.7 105 49.5
SMO331G0064 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 6.6e-15 84.3 104 46.2
Nitab4.5_0008073g0020 Nicotiana tabacum HOM05D004739 ORTHO05D005784 2.5e-14 82.4 106 43.4
Cfa022531 Carpinus fangiana HOM05D004739 ORTHO05D121730 1.1e-12 77.0 94 40.4
SMO331G0063 Selaginella moellendorffii HOM05D004739 ORTHO05D005784 1.3e-10 70.1 53 60.4
BolC1t05400H Brassica oleracea HOM05D000493 ORTHO05D001355 2.4e-09 65.9 50 60.0


User provided reference genes

Program Settings