Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0018295 Lotus japonicus HOM05D006943 ORTHO05D008565 4.2e-179 631.3 336 100.0
Ca_01518_v3 Cicer arietinum L. HOM05D006943 ORTHO05D008565 1.5e-91 340.5 317 62.5
Medtr1g009220 Medicago truncatula HOM05D006943 ORTHO05D008565 1.6e-82 310.5 323 58.2
Glyma.14G138000 Glycine max HOM05D006943 ORTHO05D008565 1.1e-75 287.7 326 54.9
Glyma.17G194700 Glycine max HOM05D006943 ORTHO05D008565 1.1e-73 281.2 327 54.1
Phvul.001G077900 Phaseolus vulgaris HOM05D006943 ORTHO05D008565 2.4e-73 280.0 323 52.3
arahy.Tifrunner.gnm1.ann1.HML22G Arachis hypogaea HOM05D006943 ORTHO05D008565 5.2e-73 278.9 364 50.3
arahy.Tifrunner.gnm1.ann1.X8DLDE Arachis hypogaea HOM05D006943 ORTHO05D008565 3.4e-72 276.2 364 50.3
Psat6g033160 Pisum sativum HOM05D006943 ORTHO05D008565 1.3e-68 264.2 319 54.2
VMungo0647G1044 Vigna mungo HOM05D006943 ORTHO05D008565 3.9e-68 262.7 328 51.5
Lalb_Chr22g0361191 Lupinus albus HOM05D006943 ORTHO05D008565 1.9e-67 260.4 360 48.6
TPR.G11968 Trifolium pratense HOM05D006943 ORTHO05D008565 3.6e-58 229.6 417 42.4
Haze_21789 Corylus avellana HOM05D006943 ORTHO05D008565 1.3e-36 157.9 344 36.3
Atru.chr7.2692 Acer truncatum HOM05D006943 ORTHO05D008565 3.0e-36 156.8 315 35.2
QL12p025818 Quercus lobata HOM05D006943 ORTHO05D008565 1.9e-35 154.1 347 34.6
Cfa013306 Carpinus fangiana HOM05D006943 ORTHO05D008565 4.8e-34 149.4 347 34.9
Ciclev10009072m.g Citrus clementina HOM05D006943 ORTHO05D008565 1.4e-33 147.9 334 35.6
Dinv37491 Davidia involucrata HOM05D006943 ORTHO05D008565 8.5e-31 138.7 340 32.9
CANSAT35G2034 Cannabis sativa HOM05D006943 ORTHO05D008565 2.5e-30 137.1 339 33.9
Dinv38807 Davidia involucrata HOM05D006943 ORTHO05D008565 2.5e-30 137.1 170 44.1
A08p18750 Brassica napus HOM05D006943 ORTHO05D008565 4.2e-30 136.3 171 47.4
Cpa.g.sc148.5 Carica papaya HOM05D006943 ORTHO05D008565 7.2e-30 135.6 347 32.6
Thhalv10025787m.g Eutrema salsugineum HOM05D006943 ORTHO05D008565 1.6e-29 134.4 342 34.2
GSVIVG01035569001 Vitis vinifera HOM05D006943 ORTHO05D008565 3.9e-28 129.8 344 30.2
BcaC01g01105 Brassica carinata HOM05D006943 ORTHO05D008565 8.8e-28 128.6 162 45.1
C03p88130 Brassica napus HOM05D006943 ORTHO05D008565 8.8e-28 128.6 162 45.1
BcaB03g12686 Brassica carinata HOM05D006943 ORTHO05D008565 2.0e-27 127.5 166 45.8
Eucgr.L02411 Eucalyptus grandis HOM05D006943 ORTHO05D008565 2.5e-27 127.1 142 49.3
CsaV3_3G047250 Cucumis sativus L. HOM05D006943 ORTHO05D008565 5.7e-27 125.9 352 33.2
Aa31LG2G19090 Aethionema arabicum HOM05D006943 ORTHO05D008565 9.7e-27 125.2 235 40.0
ClCG05G026350 Citrullus lanatus HOM05D006943 ORTHO05D008565 9.7e-27 125.2 353 32.0
BolC3t21121H Brassica oleracea HOM05D006943 ORTHO05D008565 3.7e-26 123.2 165 44.2
TAR636G0756 Trochodendron aralioides HOM05D006943 ORTHO05D008565 4.8e-26 122.9 173 44.5
TWI63G1698 Tripterygium wilfordii HOM05D006943 ORTHO05D008565 6.3e-26 122.5 328 30.5
MELO3C003604.2 Cucumis melo HOM05D006943 ORTHO05D008565 8.2e-26 122.1 356 33.1
AT4G31270 Arabidopsis thaliana HOM05D006943 ORTHO05D008565 1.4e-25 121.3 237 38.8
Sed0013911 Sechium edule HOM05D006943 ORTHO05D008565 2.4e-25 120.6 341 31.4
Sp7g29130 Schrenkiella parvula HOM05D006943 ORTHO05D008565 4.1e-25 119.8 208 39.9
THA.LOC104803585 Tarenaya hassleriana HOM05D006943 ORTHO05D008565 4.1e-25 119.8 344 34.6
SalBow8G0710 Salvia bowleyana HOM05D006943 ORTHO05D008565 5.3e-25 119.4 345 30.1
FvH4_2g36510 Fragaria vesca HOM05D006943 ORTHO05D008565 6.9e-25 119.0 173 41.0
Manes.16G137900 Manihot esculenta HOM05D006943 ORTHO05D008565 6.9e-25 119.0 210 36.7
AL7G20800 Arabidopsis lyrata HOM05D006943 ORTHO05D008565 1.2e-24 118.2 334 31.7
BraA08t33836Z Brassica rapa HOM05D006943 ORTHO05D008565 1.2e-24 118.2 340 30.9
FAN27G2029 Fragaria x ananassa HOM05D006943 ORTHO05D008565 1.5e-24 117.9 196 39.3
Oeu008780.1 Olea europaea HOM05D006943 ORTHO05D008565 1.5e-24 117.9 334 30.8
FAN20G3130 Fragaria x ananassa HOM05D006943 ORTHO05D008565 2.6e-24 117.1 187 40.1
Carub.0007s0929 Capsella rubella HOM05D006943 ORTHO05D008565 3.4e-24 116.7 238 36.1
FAN15G2754 Fragaria x ananassa HOM05D006943 ORTHO05D008565 3.4e-24 116.7 187 38.5
Eucgr.C02135 Eucalyptus grandis HOM05D006943 ORTHO05D008565 5.9e-24 115.9 383 31.3
Lsat_1_v5_gn_3_68681 Lactuca sativa HOM05D006943 ORTHO05D008565 7.7e-24 115.5 193 38.9
Migut.E01408 Erythranthe guttata HOM05D006943 ORTHO05D008565 1.7e-23 114.4 346 28.9
Migut.E01420 Erythranthe guttata HOM05D006943 ORTHO05D008565 1.7e-23 114.4 346 28.9
ECA246G0365 Erigeron canadensis HOM05D006943 ORTHO05D008565 2.9e-23 113.6 302 32.5
VMungo0720G0266 Vigna mungo HOM05D006943 ORTHO05D008565 5.0e-23 112.8 115 56.5
Hund03260 Selenicereus undatus HOM05D006943 ORTHO05D008565 3.2e-22 110.2 156 42.9
Duzib168G0749 Durio zibethinus HOM05D006943 ORTHO05D008565 7.2e-22 109.0 333 30.3
Prupe.1G456500 Prunus persica HOM05D006943 ORTHO05D008565 7.2e-22 109.0 340 30.0
CARHR239150 Cardamine hirsuta HOM05D006943 ORTHO05D008565 9.4e-22 108.6 219 38.4
HanXRQChr03g0081291 Helianthus annuus HOM05D006943 ORTHO05D008565 9.4e-22 108.6 185 38.9
Potri.018G002801 Populus trichocarpa HOM05D006943 ORTHO05D008565 9.4e-22 108.6 192 35.9
RcHm_v2.0_Chr6g0305361 Rosa chinensis HOM05D006943 ORTHO05D008565 2.1e-21 107.5 167 39.5
Sc06g0001270 Simmondsia chinensis HOM05D006943 ORTHO05D008565 2.1e-21 107.5 353 28.6
VMungo0331G1831 Vigna mungo HOM05D006943 ORTHO05D008565 2.7e-21 107.1 142 50.0
Actinidia25739 Actinidia chinensis HOM05D006943 ORTHO05D008565 4.7e-21 106.3 350 27.4
MSTRG.13940 Avicennia marina HOM05D006943 ORTHO05D008565 4.7e-21 106.3 139 41.7
MSTRG.13929 Avicennia marina HOM05D006943 ORTHO05D008565 6.1e-21 105.9 136 43.4
Nitab4.5_0001942g0070 Nicotiana tabacum HOM05D006943 ORTHO05D008565 1.0e-20 105.1 328 27.4
EL10Ac2g03684 Beta vulgaris HOM05D006943 ORTHO05D008565 1.8e-20 104.4 203 39.4
DCAR_004562 Daucus carota HOM05D006943 ORTHO05D008565 2.3e-20 104.0 304 30.6
ECA240G4190 Erigeron canadensis HOM05D006943 ORTHO05D008565 6.7e-20 102.4 72 63.9
Solyc08g069160.3 Solanum lycopersicum HOM05D006943 ORTHO05D008565 6.7e-20 102.4 330 27.0
CSS0048200 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 8.8e-20 102.1 142 42.3
Potri.006G279100 Populus trichocarpa HOM05D006943 ORTHO05D008565 8.8e-20 102.1 189 37.6
CSS0017346 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 2.0e-19 100.9 137 43.1
Cc10_g14290 Coffea canephora HOM05D006943 ORTHO05D008565 2.6e-19 100.5 335 29.9
COL.COLO4_18631 Corchorus olitorius HOM05D006943 ORTHO05D008565 2.6e-19 100.5 341 29.0
Sopen08g022790 Solanum pennellii HOM05D006943 ORTHO05D008565 3.3e-19 100.1 329 27.7
Lsat_1_v5_gn_5_56401 Lactuca sativa HOM05D006943 ORTHO05D008565 5.7e-19 99.4 200 35.0
CSS0049214 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 9.7e-19 98.6 137 42.3
AUR62038724 Chenopodium quinoa HOM05D006943 ORTHO05D008565 9.7e-19 98.6 202 33.7
AUR62043827 Chenopodium quinoa HOM05D006943 ORTHO05D008565 9.7e-19 98.6 202 33.7
Nn5g27072 Nelumbo nucifera HOM05D006943 ORTHO05D008565 9.7e-19 98.6 314 29.9
PGSC0003DMG400029553 Solanum tuberosum HOM05D006943 ORTHO05D008565 1.3e-18 98.2 328 27.4
VMungo1215G2891 Vigna mungo HOM05D006943 ORTHO05D008565 4.8e-18 96.3 144 45.1
Nitab4.5_0005058g0010 Nicotiana tabacum HOM05D006943 ORTHO05D008565 2.4e-17 94.0 335 26.3
Aqoxy7G02511 Aquilegia oxysepala HOM05D006943 ORTHO05D008565 4.1e-17 93.2 162 34.0
HanXRQChr17g0539241 Helianthus annuus HOM05D006943 ORTHO05D008565 7.0e-17 92.4 197 39.6
AUR62020649 Chenopodium quinoa HOM05D006943 ORTHO05D008565 9.1e-17 92.0 202 31.7
Ah.11g044140 Amaranthus hybridus HOM05D006943 ORTHO05D008565 2.0e-16 90.9 230 33.0
MD08G1124900 Malus domestica HOM05D006943 ORTHO05D008565 2.6e-16 90.5 333 29.4
MD15G1104200 Malus domestica HOM05D006943 ORTHO05D008565 4.5e-16 89.7 340 30.3
Peaxi162Scf00213g00939 Petunia axillaris HOM05D006943 ORTHO05D008565 5.9e-16 89.4 328 25.0
CAN.G480.10 Capsicum annuum HOM05D006943 ORTHO05D008565 2.2e-15 87.4 331 24.5
VMungo0540G2247 Vigna mungo HOM05D002022 ORTHO05D010195 6.5e-15 85.9 128 43.8
Atru.chr6.219 Acer truncatum HOM05D006943 ORTHO05D008565 1.6e-13 81.3 56 67.9
ATR0626G281 Amborella trichopoda HOM05D006943 ORTHO05D008565 2.1e-13 80.9 70 50.0
PSO170G5679 Papaver somniferum HOM05D006943 ORTHO05D008565 6.1e-13 79.3 183 30.6
PSO063G4511 Papaver somniferum HOM05D006943 ORTHO05D008565 8.0e-13 79.0 183 30.6
MBI16_g00837_MAGBIO Magnolia biondii HOM05D006943 ORTHO05D008565 5.2e-12 76.3 207 30.9
HPP92_021992 Vanilla planifolia HOM05D006943 ORTHO05D008565 7.4e-11 72.4 317 25.6
CDE02G0425 Ceratophyllum demersum HOM05D006943 ORTHO05D008565 2.2e-10 70.9 226 30.1
Actinidia03335 Actinidia chinensis HOM05D006943 ORTHO05D008565 2.8e-10 70.5 53 62.3
CSS0045137 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 8.2e-10 68.9 159 34.0
Os02g0174300 Oryza sativa ssp. japonica HOM05D006943 ORTHO05D008565 5.3e-09 66.2 78 46.2
Zm00001eb233350 Zea mays HOM05D006943 ORTHO05D008565 1.6e-08 64.7 102 37.3


User provided reference genes

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