Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A50T68 Lonicera japonica HOM05D005962 ORTHO05D007325 1.6e-89 332.8 171 100.0
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 8.3e-75 283.9 171 82.5
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 8.6e-72 273.9 172 80.8
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 1.9e-71 272.7 169 79.3
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 5.6e-71 271.2 171 81.3
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 1.2e-70 270.0 169 79.3
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 2.1e-70 269.2 171 79.5
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 1.4e-69 266.5 171 80.7
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 1.4e-69 266.5 169 78.1
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 1.8e-69 266.2 171 78.9
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 4.0e-69 265.0 171 77.8
Cfa019373 Carpinus fangiana HOM05D005962 ORTHO05D007325 8.9e-69 263.8 171 77.2
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 1.2e-68 263.5 169 78.1
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 2.6e-68 262.3 171 76.6
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 2.6e-68 262.3 171 76.6
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 7.5e-68 260.8 171 77.2
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 7.5e-68 260.8 169 78.7
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 9.8e-68 260.4 169 81.1
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.3e-67 260.0 166 79.5
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 1.7e-67 259.6 170 80.0
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 1.7e-67 259.6 174 76.4
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 2.2e-67 259.2 171 77.8
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 2.2e-67 259.2 169 76.3
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 2.9e-67 258.8 169 78.7
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 6.4e-67 257.7 171 76.6
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 1.1e-66 256.9 171 77.2
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.1e-66 256.9 167 80.2
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 1.9e-66 256.1 174 75.3
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 2.4e-66 255.8 171 75.4
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 3.2e-66 255.4 163 79.8
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 3.2e-66 255.4 171 78.4
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 7.0e-66 254.2 172 75.0
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 7.0e-66 254.2 169 75.7
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 9.2e-66 253.8 173 76.9
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 9.2e-66 253.8 171 74.3
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 9.2e-66 253.8 169 76.9
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 1.2e-65 253.4 171 77.8
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 1.2e-65 253.4 172 75.0
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 1.6e-65 253.1 169 76.9
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 3.5e-65 251.9 169 75.1
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 4.6e-65 251.5 171 73.1
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 6.0e-65 251.1 162 79.0
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 6.0e-65 251.1 171 73.1
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 6.0e-65 251.1 169 76.9
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 7.8e-65 250.8 171 76.0
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 7.8e-65 250.8 171 74.9
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 1.7e-64 249.6 170 77.1
TPR.G39766 Trifolium pratense HOM05D005962 ORTHO05D007325 1.7e-64 249.6 171 71.3
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 3.0e-64 248.8 169 74.6
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 3.0e-64 248.8 171 76.6
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 3.0e-64 248.8 169 75.1
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 5.0e-64 248.1 171 74.3
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 5.0e-64 248.1 171 74.3
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 6.6e-64 247.7 171 73.1
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 6.6e-64 247.7 169 75.7
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 1.1e-63 246.9 171 74.9
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.1e-63 246.9 171 75.4
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 1.9e-63 246.1 171 76.6
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 4.3e-63 245.0 171 74.9
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 7.3e-63 244.2 171 75.4
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 1.6e-62 243.0 171 73.1
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 4.7e-62 241.5 171 74.9
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 8.0e-62 240.7 171 74.3
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.1e-61 240.4 171 74.3
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 1.8e-61 239.6 171 74.3
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 3.1e-61 238.8 170 70.6
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 4.0e-61 238.4 171 73.7
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 6.8e-61 237.7 137 89.8
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 8.9e-61 237.3 170 70.6
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 1.5e-60 236.5 170 70.6
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 2.0e-60 236.1 171 69.6
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 6.4e-59 231.1 163 74.8
MD14G1079700 Malus domestica HOM05D005962 ORTHO05D007325 8.3e-59 230.7 168 72.0
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 8.3e-59 230.7 171 71.9
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 1.1e-58 230.3 172 70.3
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 2.7e-57 225.7 175 66.9
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 1.2e-54 216.9 172 65.1
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 1.2e-54 216.9 171 66.1
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 1.2e-54 216.9 171 66.1
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 1.6e-54 216.5 171 65.5
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 8.1e-54 214.2 171 64.9
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 8.1e-54 214.2 171 65.5
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 1.4e-53 213.4 170 62.9
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 6.8e-53 211.1 171 63.7
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 8.9e-53 210.7 171 64.3
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 8.9e-53 210.7 136 79.4
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 1.2e-52 210.3 171 64.9
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 2.0e-52 209.5 172 62.8
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 3.4e-52 208.8 172 63.4
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 9.9e-52 207.2 171 63.7
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 4.9e-51 204.9 172 62.8
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 4.9e-51 204.9 171 62.6
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 4.9e-51 204.9 170 62.9
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 1.1e-50 203.8 172 64.0
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 1.2e-49 200.3 118 82.2
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 1.6e-49 199.9 172 63.4
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 2.1e-49 199.5 171 59.6
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 2.7e-49 199.1 174 62.1
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 4.6e-49 198.4 172 62.8
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 4.6e-49 198.4 172 62.2
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 7.3e-47 191.0 182 59.3
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 2.1e-46 189.5 117 82.1
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 1.7e-43 179.9 209 51.2
Medtr0361s0030 Medicago truncatula HOM05D005962 ORTHO05D007325 2.4e-37 159.5 102 74.5
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 1.2e-36 157.1 81 92.6
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 3.4e-36 155.6 80 92.5
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 9.9e-36 154.1 80 92.5
QL05p018100 Quercus lobata HOM05D005962 ORTHO05D007325 1.3e-35 153.7 93 80.6
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 6.0e-33 144.8 180 48.9
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 3.0e-32 142.5 147 54.4
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 6.6e-32 141.4 80 83.8
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 1.1e-31 140.6 179 49.7
SEGI_18792 Sequoiadendron giganteum HOM05D005962 ORTHO05D007325 2.1e-30 136.3 80 78.8
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 6.2e-30 134.8 80 78.8
SMO143G0120 Selaginella moellendorffii HOM05D005962 ORTHO05D007325 8.1e-30 134.4 128 56.2
RcHm_v2.0_Chr5g0064381 Rosa chinensis HOM05D005962 ORTHO05D007325 6.0e-25 118.2 89 64.0
CBR_g22489 Chara braunii HOM05D005962 ORTHO05D007325 1.8e-24 116.7 177 45.2
Lj3g0016976 Lotus japonicus HOM05D005962 ORTHO05D007325 5.1e-24 115.2 84 71.4
TAR624G0741 Trochodendron aralioides HOM05D005962 ORTHO05D007325 2.5e-23 112.8 145 48.3
TAR623G1541 Trochodendron aralioides HOM05D005962 ORTHO05D007325 6.9e-21 104.8 57 86.0
Ah.04g150130 Amaranthus hybridus HOM05D000535 ORTHO05D000427 2.0e-20 103.2 90 62.2
Zm00001eb084330 Zea mays HOM05D005962 ORTHO05D007325 6.7e-16 88.2 55 74.5
Zm00001eb192830 Zea mays HOM05D005962 ORTHO05D007325 3.3e-15 85.9 57 68.4
BraA09t39590Z Brassica rapa HOM05D002393 ORTHO05D002845 3.4e-12 75.9 64 59.4
Cpa.g.c26718.1 Carica papaya HOM05D005962 ORTHO05D007325 1.6e-09 67.0 54 63.0
Dinv30417 Davidia involucrata HOM05D000106 ORTHO05D000160 2.3e-08 63.2 61 60.7
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 3.9e-08 62.4 45 71.1
PRCOL_00006676 Prasinoderma coloniale HOM05D001184 ORTHO05D008450 1.9e-07 60.1 65 44.6
C09p14660 Brassica napus HOM05D017738 ORTHO05D042708 1.6e-06 57.0 93 38.7
BolC9t54371H Brassica oleracea HOM05D017738 ORTHO05D042708 1.6e-06 57.0 93 38.7


User provided reference genes

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