Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C311T3 Lonicera japonica HOM05D003876 ORTHO05D004560 0.0e+00 1615.9 818 100.0
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 0.0e+00 1162.1 787 75.6
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 0.0e+00 1146.7 782 75.4
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 2.2e-298 1028.9 804 67.3
vmacro22462 Vaccinium macrocarpon HOM05D003876 ORTHO05D004560 8.3e-290 1000.3 784 66.5
Rhsim03G0118500 Rhododendron simsii HOM05D003876 ORTHO05D004560 2.1e-285 985.7 778 65.6
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 3.9e-279 964.9 780 65.6
HanXRQChr14g0456751 Helianthus annuus HOM05D003876 ORTHO05D004560 2.3e-276 955.7 778 65.0
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 3.5e-272 941.8 784 62.9
Ciclev10007236m.g Citrus clementina HOM05D003876 ORTHO05D004560 1.1e-270 936.8 780 63.3
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 1.5e-270 936.4 787 63.4
DCAR_015293 Daucus carota HOM05D003876 ORTHO05D004560 3.4e-267 925.2 776 63.3
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 1.0e-263 913.7 785 61.8
CiPaw.11G188300 Carya illinoinensis HOM05D003876 ORTHO05D004560 1.2e-261 906.7 784 61.9
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 2.1e-261 906.0 787 62.1
Thecc.07G169600 Theobroma cacao HOM05D003876 ORTHO05D004560 2.4e-260 902.5 790 61.3
Sc07g0002730 Simmondsia chinensis HOM05D003876 ORTHO05D004560 1.2e-259 900.2 772 60.6
ECA238G2706 Erigeron canadensis HOM05D003876 ORTHO05D004560 3.4e-259 898.7 737 64.6
Cc02_g11170 Coffea canephora HOM05D003876 ORTHO05D004560 5.8e-259 897.9 787 61.5
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 4.9e-258 894.8 780 60.9
Lj4A310T24 Lonicera japonica HOM05D003876 ORTHO05D004560 8.4e-258 894.0 651 75.9
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 5.4e-257 891.3 808 60.3
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 1.0e-255 887.1 788 61.2
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 3.0e-255 885.6 775 61.0
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 1.9e-254 882.9 788 60.8
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 4.3e-254 881.7 777 61.1
AUR62020460 Chenopodium quinoa HOM05D003876 ORTHO05D004560 5.6e-254 881.3 780 60.0
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 6.2e-253 877.9 786 59.5
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 5.8e-251 871.3 783 59.6
AUR62015755 Chenopodium quinoa HOM05D003876 ORTHO05D004560 3.8e-250 868.6 779 58.9
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 7.1e-249 864.4 785 59.6
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 1.2e-248 863.6 778 60.0
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 1.6e-248 863.2 765 58.8
Nn1g07120 Nelumbo nucifera HOM05D003876 ORTHO05D004560 7.9e-248 860.9 779 59.9
Peaxi162Scf01227g00036 Petunia axillaris HOM05D003876 ORTHO05D004560 6.7e-247 857.8 780 58.7
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 2.1e-245 852.8 769 58.4
Sopen02g015700 Solanum pennellii HOM05D003876 ORTHO05D004560 8.1e-245 850.9 780 58.8
MSTRG.9162 Avicennia marina HOM05D003876 ORTHO05D004560 1.4e-244 850.1 782 59.0
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 5.3e-244 848.2 773 58.6
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 3.4e-243 845.5 778 58.2
Ah.14g087580 Amaranthus hybridus HOM05D003876 ORTHO05D004560 4.5e-243 845.1 767 57.1
CAN.G93.17 Capsicum annuum HOM05D003876 ORTHO05D004560 2.4e-241 839.3 769 58.6
TWI38G0366 Tripterygium wilfordii HOM05D003876 ORTHO05D004560 3.0e-239 832.4 800 57.9
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 3.3e-238 828.9 783 56.6
SalBow4G0850 Salvia bowleyana HOM05D003876 ORTHO05D004560 1.6e-237 826.6 770 57.5
SalBow4G0132 Salvia bowleyana HOM05D003876 ORTHO05D004560 2.1e-237 826.2 770 57.5
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 3.2e-233 812.4 781 58.5
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 2.7e-232 809.3 779 57.0
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 1.6e-229 800.0 774 54.7
CSS0021387 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 2.8e-229 799.3 587 70.0
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 4.1e-228 795.4 760 55.3
SGA_v2.0_scaffold13G06370 Striga asiatica HOM05D003876 ORTHO05D004560 9.0e-228 794.3 783 55.4
TPR.G34799 Trifolium pratense HOM05D003876 ORTHO05D004560 1.2e-227 793.9 780 54.9
MBI16_g24182_MAGBIO Magnolia biondii HOM05D003876 ORTHO05D004560 7.6e-227 791.2 823 53.5
CsaV3_7G026680 Cucumis sativus L. HOM05D003876 ORTHO05D004560 5.5e-225 785.0 764 56.3
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 7.2e-225 784.6 792 54.4
ClCG09G008390 Citrullus lanatus HOM05D003876 ORTHO05D004560 1.2e-224 783.9 772 56.1
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 2.1e-224 783.1 768 55.9
Psat7g030440 Pisum sativum HOM05D003876 ORTHO05D004560 2.3e-223 779.6 769 54.5
MELO3C021122.2 Cucumis melo HOM05D003876 ORTHO05D004560 6.7e-223 778.1 769 55.4
Lj6g0024588 Lotus japonicus HOM05D003876 ORTHO05D004560 6.7e-223 778.1 768 54.7
THA.LOC104817664 Tarenaya hassleriana HOM05D003876 ORTHO05D004560 1.1e-222 777.3 774 55.2
AL7G25820 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 1.6e-221 773.5 788 53.9
Aa31LG5G10400 Aethionema arabicum HOM05D003876 ORTHO05D004560 1.4e-220 770.4 778 53.5
Aqoxy1G03250 Aquilegia oxysepala HOM05D003876 ORTHO05D004560 6.9e-220 768.1 792 53.8
Glyma.18G096800 Glycine max HOM05D003876 ORTHO05D004560 4.5e-219 765.4 780 54.1
PSO541G2928 Papaver somniferum HOM05D003876 ORTHO05D004560 7.7e-219 764.6 806 52.5
PSO675G8409 Papaver somniferum HOM05D003876 ORTHO05D004560 1.3e-218 763.8 788 53.0
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 2.5e-217 759.6 769 53.3
Medtr3g051730 Medicago truncatula HOM05D003876 ORTHO05D004560 2.5e-217 759.6 778 52.8
AT4G27010 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 3.6e-216 755.7 795 53.0
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 1.8e-215 753.4 779 52.5
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 3.9e-215 752.3 776 53.6
Migut.F01968 Erythranthe guttata HOM05D003876 ORTHO05D004560 6.7e-215 751.5 774 53.2
Migut.D01652 Erythranthe guttata HOM05D003876 ORTHO05D004560 2.2e-213 746.5 771 52.8
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.5e-206 723.8 729 54.6
COL.COLO4_07981 Corchorus olitorius HOM05D003876 ORTHO05D004560 3.8e-202 709.1 622 61.6
Sp7g24970 Schrenkiella parvula HOM05D003876 ORTHO05D004560 1.2e-200 704.1 856 47.5
ATR0752G176 Amborella trichopoda HOM05D003876 ORTHO05D004560 5.4e-188 662.1 856 46.0
BolC1t02247H Brassica oleracea HOM05D003876 ORTHO05D004560 1.4e-183 647.5 773 49.0
C01p23130 Brassica napus HOM05D003876 ORTHO05D004560 1.7e-181 640.6 780 48.6
A01p18170 Brassica napus HOM05D003876 ORTHO05D004560 9.2e-180 634.8 779 48.0
BraA01t01772Z Brassica rapa HOM05D003876 ORTHO05D004560 9.2e-180 634.8 779 48.0
BcaNung03576 Brassica carinata HOM05D003876 ORTHO05D004560 2.7e-179 633.3 782 48.2
Zm00001eb070180 Zea mays HOM05D003876 ORTHO05D004560 3.6e-176 622.9 803 45.1
AL1G51930 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 2.0e-174 617.1 786 46.1
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 3.4e-174 616.3 696 50.9
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 7.0e-172 608.6 647 52.6
SHI26626 Sapria himalayana HOM05D003876 ORTHO05D004560 2.3e-170 603.6 784 46.0
CDE12G0710 Ceratophyllum demersum HOM05D003876 ORTHO05D004560 4.3e-169 599.4 730 46.4
VMungo0540G1458 Vigna mungo HOM05D003876 ORTHO05D004560 4.7e-168 595.9 637 52.1
AL2G26020 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 8.0e-168 595.1 721 47.4
HPP92_009565 Vanilla planifolia HOM05D003876 ORTHO05D004560 1.4e-151 541.2 758 43.9
Thhalv10024185m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 6.8e-151 538.9 630 48.1
Nitab4.5_0014432g0010 Nicotiana tabacum HOM05D003876 ORTHO05D004560 3.4e-150 536.6 528 55.3
Thhalv10009735m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 1.9e-145 520.8 794 42.8
Nitab4.5_0000071g0230 Nicotiana tabacum HOM05D003876 ORTHO05D004560 2.6e-142 510.4 502 56.0
AT1G72270 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 2.7e-139 500.4 630 47.6
AL1G52050 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 8.7e-130 468.8 798 39.1
Haze_08116 Corylus avellana HOM05D003876 ORTHO05D004560 2.2e-109 401.0 323 63.8
SEGI_05754 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 1.2e-107 395.2 696 38.9
BcaNung03573 Brassica carinata HOM05D003876 ORTHO05D004560 2.1e-99 367.9 343 58.3
SMO146G0332 Selaginella moellendorffii HOM05D003876 ORTHO05D004560 3.0e-98 364.0 761 34.7
CARHR229820 Cardamine hirsuta HOM05D003876 ORTHO05D004560 2.0e-97 361.3 467 45.8
Pp3c2_30140 Physcomitrium patens HOM05D003876 ORTHO05D004560 1.7e-96 358.2 835 31.9
Ciclev10007833m.g Citrus clementina HOM05D003876 ORTHO05D004560 2.0e-89 334.7 423 47.0
Mapoly0015s0081 Marchantia polymorpha HOM05D003876 ORTHO05D004560 7.4e-89 332.8 792 29.9
Carub.0007s1383 Capsella rubella HOM05D003876 ORTHO05D004560 4.4e-73 280.4 399 42.9
AagrBONN_evm.TU.Sc2ySwM_362.592 Anthoceros agrestis HOM05D003876 ORTHO05D004560 1.3e-72 278.9 826 28.7
Carub.0004s0902 Capsella rubella HOM05D003876 ORTHO05D004560 6.8e-58 229.9 398 38.9
Ca_01853_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 1.3e-56 225.7 184 66.8
Gohir.A05G328616 Gossypium hirsutum HOM05D003876 ORTHO05D004560 4.9e-56 223.8 217 56.2
Solyc02g065500.4 Solanum lycopersicum HOM05D003876 ORTHO05D004560 3.3e-52 211.1 201 52.7
CBR_g48672 Chara braunii HOM05D003876 ORTHO05D004560 5.4e-47 193.7 909 24.1
Phvul.006G043300 Phaseolus vulgaris HOM05D003876 ORTHO05D004560 3.6e-43 181.0 200 47.0
Os04g0625350 Oryza sativa ssp. japonica HOM05D003876 ORTHO05D004560 1.1e-39 169.5 168 50.6
Gohir.A05G328608 Gossypium hirsutum HOM05D003876 ORTHO05D004560 6.0e-38 163.7 151 60.9
CARHR234630 Cardamine hirsuta HOM05D003876 ORTHO05D004560 7.3e-36 156.8 184 45.7
QL08p011039 Quercus lobata HOM05D003876 ORTHO05D004560 1.9e-23 115.5 128 53.1
SEGI_37008 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 3.9e-21 107.8 182 38.5
HPP92_009518 Vanilla planifolia HOM05D003876 ORTHO05D004560 4.8e-19 100.9 169 37.9
QL08p010601 Quercus lobata HOM05D003876 ORTHO05D004560 4.6e-14 84.3 261 28.7
QL08p010686 Quercus lobata HOM05D003876 ORTHO05D004560 1.8e-13 82.4 62 66.1
Cre02.g074300 Chlamydomonas reinhardtii HOM05D003876 ORTHO05D004560 5.1e-13 80.9 358 22.6
QL08p010640 Quercus lobata HOM05D003876 ORTHO05D004560 2.5e-12 78.6 91 47.3
QL10p036392 Quercus lobata HOM05D003876 ORTHO05D004560 2.8e-11 75.1 91 46.2
QL08p010925 Quercus lobata HOM05D003876 ORTHO05D004560 1.1e-10 73.2 106 44.3
SEGI_19037 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 4.0e-10 71.2 163 35.0
QL08p010874 Quercus lobata HOM05D003876 ORTHO05D004560 9.0e-10 70.1 51 68.6
QL08p010959 Quercus lobata HOM05D003876 ORTHO05D004560 7.6e-09 67.0 92 46.7
QL08p010650 Quercus lobata HOM05D003876 ORTHO05D004560 2.2e-08 65.5 51 60.8
QL10p036338 Quercus lobata HOM05D003876 ORTHO05D004560 2.2e-08 65.5 51 60.8


User provided reference genes

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