Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A923T26 Lonicera japonica HOM05D004198 ORTHO05D006470 8.3e-97 357.1 185 100.0
CSS0027728 Camellia sinensis var. sinensis HOM05D004198 ORTHO05D006470 1.5e-61 240.0 180 71.7
Dinv25493 Davidia involucrata HOM05D004198 ORTHO05D006470 3.7e-60 235.3 182 73.1
Duzib168G0708 Durio zibethinus HOM05D004198 ORTHO05D006470 1.2e-58 230.3 183 69.4
Thecc.09G068000 Theobroma cacao HOM05D004198 ORTHO05D006470 1.2e-58 230.3 183 69.9
Actinidia39606 Actinidia chinensis HOM05D004198 ORTHO05D006470 1.5e-58 229.9 183 67.2
ECA240G2250 Erigeron canadensis HOM05D004198 ORTHO05D006470 1.5e-58 229.9 183 67.2
Actinidia33515 Actinidia chinensis HOM05D004198 ORTHO05D006470 1.0e-57 227.3 183 68.3
Duzib150G0139 Durio zibethinus HOM05D004198 ORTHO05D006470 2.9e-57 225.7 183 68.3
TAR624G1053 Trochodendron aralioides HOM05D004198 ORTHO05D006470 1.9e-56 223.0 179 70.9
Gohir.A06G082000 Gossypium hirsutum HOM05D004198 ORTHO05D006470 2.5e-56 222.6 186 65.6
Nitab4.5_0000055g0100 Nicotiana tabacum HOM05D004198 ORTHO05D006470 3.2e-56 222.2 165 71.5
Cc00_g13770 Coffea canephora HOM05D004198 ORTHO05D006470 4.2e-56 221.9 171 70.8
Hma1.2p1_0179F.1_g079100 Hydrangea macrophylla HOM05D004198 ORTHO05D006470 9.3e-56 220.7 183 66.7
Rhsim05G0001300 Rhododendron simsii HOM05D004198 ORTHO05D006470 9.3e-56 220.7 183 65.6
Gohir.D06G081400 Gossypium hirsutum HOM05D004198 ORTHO05D006470 2.7e-55 219.2 186 65.6
Gorai.010G094700 Gossypium raimondii HOM05D004198 ORTHO05D006470 3.5e-55 218.8 186 65.6
vmacro17070 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 6.0e-55 218.0 183 64.5
Manes.16G088900 Manihot esculenta HOM05D004198 ORTHO05D006470 1.0e-54 217.2 182 65.9
Oeu021231.1 Olea europaea HOM05D004198 ORTHO05D006470 1.3e-54 216.9 171 67.3
Cfa002929 Carpinus fangiana HOM05D004198 ORTHO05D006470 2.3e-54 216.1 183 66.1
Lsat_1_v5_gn_5_138341 Lactuca sativa HOM05D004198 ORTHO05D006470 1.1e-53 213.8 183 65.6
Nitab4.5_0001114g0030 Nicotiana tabacum HOM05D004198 ORTHO05D006470 2.5e-53 212.6 166 70.5
Cpa.g.sc82.44 Carica papaya HOM05D004198 ORTHO05D006470 3.3e-53 212.2 175 67.4
Peaxi162Scf00452g00120 Petunia axillaris HOM05D004198 ORTHO05D006470 3.3e-53 212.2 177 66.7
Sabra06G0105400 Salix brachista HOM05D004198 ORTHO05D006470 4.3e-53 211.8 186 62.9
CANSAT56G1757 Cannabis sativa HOM05D004198 ORTHO05D006470 7.4e-53 211.1 183 64.5
CAN.G86.12 Capsicum annuum HOM05D004198 ORTHO05D006470 9.6e-53 210.7 172 68.6
Medtr4g124470 Medicago truncatula HOM05D004198 ORTHO05D006470 9.6e-53 210.7 182 63.7
Potri.006G134300 Populus trichocarpa HOM05D004198 ORTHO05D006470 9.6e-53 210.7 183 63.9
COL.COLO4_21183 Corchorus olitorius HOM05D004198 ORTHO05D006470 1.3e-52 210.3 185 65.4
Haze_26080 Corylus avellana HOM05D004198 ORTHO05D006470 2.1e-52 209.5 189 63.5
Lj4g0026986 Lotus japonicus HOM05D004198 ORTHO05D006470 3.7e-52 208.8 183 61.7
Solyc07g017610.3 Solanum lycopersicum HOM05D004198 ORTHO05D006470 4.8e-52 208.4 174 68.4
TPR.G12649 Trifolium pratense HOM05D004198 ORTHO05D006470 6.3e-52 208.0 183 63.4
QL11p003422 Quercus lobata HOM05D004198 ORTHO05D006470 1.8e-51 206.5 183 65.0
Ciclev10007313m.g Citrus clementina HOM05D004198 ORTHO05D006470 2.4e-51 206.1 182 63.2
Sopen07g006460 Solanum pennellii HOM05D004198 ORTHO05D006470 2.4e-51 206.1 174 67.8
TWI63G0842 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 2.4e-51 206.1 183 62.8
HanXRQChr03g0060011 Helianthus annuus HOM05D004198 ORTHO05D006470 3.1e-51 205.7 182 64.3
MBI13_g01654_MAGBIO Magnolia biondii HOM05D004198 ORTHO05D006470 6.9e-51 204.5 181 64.6
THA.LOC104804447 Tarenaya hassleriana HOM05D004198 ORTHO05D006470 9.0e-51 204.1 186 61.8
Thhalv10024287m.g Eutrema salsugineum HOM05D004198 ORTHO05D006470 1.5e-50 203.4 181 62.4
FvH4_1g09640 Fragaria vesca HOM05D004198 ORTHO05D006470 2.0e-50 203.0 180 63.9
GSVIVG01014998001 Vitis vinifera HOM05D004198 ORTHO05D006470 2.6e-50 202.6 182 64.8
FAN19G0627 Fragaria x ananassa HOM05D004198 ORTHO05D006470 3.4e-50 202.2 180 63.9
FAN26G2565 Fragaria x ananassa HOM05D004198 ORTHO05D006470 3.4e-50 202.2 180 63.9
Glyma.13G115500 Glycine max HOM05D004198 ORTHO05D006470 3.4e-50 202.2 182 60.4
Nn8g38508 Nelumbo nucifera HOM05D004198 ORTHO05D006470 4.5e-50 201.8 170 66.5
Glyma.17G044300 Glycine max HOM05D004198 ORTHO05D006470 5.9e-50 201.4 182 61.0
RcHm_v2.0_Chr2g0096481 Rosa chinensis HOM05D004198 ORTHO05D006470 1.0e-49 200.7 179 63.1
Psat4g019880 Pisum sativum HOM05D004198 ORTHO05D006470 1.3e-49 200.3 181 61.9
Prupe.7G189800 Prunus persica HOM05D004198 ORTHO05D006470 1.3e-49 200.3 169 64.5
Hund08916 Selenicereus undatus HOM05D004198 ORTHO05D006470 1.7e-49 199.9 183 59.6
AL7G18400 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 2.9e-49 199.1 180 61.7
arahy.Tifrunner.gnm1.ann1.Q7P4IG Arachis hypogaea HOM05D004198 ORTHO05D006470 3.8e-49 198.7 183 58.5
CiPaw.03G199300 Carya illinoinensis HOM05D004198 ORTHO05D006470 3.8e-49 198.7 183 61.2
Sp7g30900 Schrenkiella parvula HOM05D004198 ORTHO05D006470 3.8e-49 198.7 181 60.2
arahy.Tifrunner.gnm1.ann1.54PPAU Arachis hypogaea HOM05D004198 ORTHO05D006470 5.0e-49 198.4 183 58.5
FAN28G0237 Fragaria x ananassa HOM05D004198 ORTHO05D006470 5.0e-49 198.4 179 63.1
MSTRG.5977 Avicennia marina HOM05D004198 ORTHO05D006470 8.5e-49 197.6 183 60.7
Carub.0007s0730 Capsella rubella HOM05D004198 ORTHO05D006470 1.1e-48 197.2 183 59.0
Phvul.003G126300 Phaseolus vulgaris HOM05D004198 ORTHO05D006470 1.1e-48 197.2 180 60.0
Ca_21348_v3 Cicer arietinum L. HOM05D004198 ORTHO05D006470 4.2e-48 195.3 183 61.2
Migut.J00870 Erythranthe guttata HOM05D004198 ORTHO05D006470 5.5e-48 194.9 171 63.2
AT4G33150 Arabidopsis thaliana HOM05D004198 ORTHO05D006470 1.2e-47 193.7 177 60.5
VMungo1215G1653 Vigna mungo HOM05D004198 ORTHO05D006470 1.2e-47 193.7 180 60.0
Eucgr.C03183 Eucalyptus grandis HOM05D004198 ORTHO05D006470 4.6e-47 191.8 169 64.5
Aqoxy7G04190 Aquilegia oxysepala HOM05D004198 ORTHO05D006470 7.9e-47 191.0 182 61.0
MD02G1105300 Malus domestica HOM05D004198 ORTHO05D006470 7.9e-47 191.0 183 58.5
BcaC09g52122 Brassica carinata HOM05D004198 ORTHO05D006470 2.3e-46 189.5 179 59.2
BolC1t00527H Brassica oleracea HOM05D004198 ORTHO05D006470 3.0e-46 189.1 180 59.4
C01p05470 Brassica napus HOM05D004198 ORTHO05D006470 8.7e-46 187.6 180 58.9
Lalb_Chr12g0200381 Lupinus albus HOM05D004198 ORTHO05D006470 8.7e-46 187.6 183 57.4
Aa31sc786G10 Aethionema arabicum HOM05D004198 ORTHO05D006470 1.1e-45 187.2 176 58.0
A01p05020 Brassica napus HOM05D004198 ORTHO05D006470 1.1e-45 187.2 181 58.0
BraA01t00484Z Brassica rapa HOM05D004198 ORTHO05D006470 1.1e-45 187.2 181 58.0
SGA_v2.0_scaffold31G12701 Striga asiatica HOM05D004198 ORTHO05D006470 3.3e-45 185.7 167 61.1
Sc14g0000910 Simmondsia chinensis HOM05D004198 ORTHO05D006470 4.3e-45 185.3 183 59.0
MELO3C015556.2 Cucumis melo HOM05D004198 ORTHO05D006470 5.7e-45 184.9 181 55.8
ATR0099G092 Amborella trichopoda HOM05D004198 ORTHO05D006470 1.3e-44 183.7 174 59.8
ClCG03G014720 Citrullus lanatus HOM05D004198 ORTHO05D006470 1.3e-44 183.7 182 54.9
CsaV3_1G041440 Cucumis sativus L. HOM05D004198 ORTHO05D006470 2.8e-44 182.6 184 55.4
MD02G1105000 Malus domestica HOM05D004198 ORTHO05D006470 2.8e-44 182.6 168 60.7
PGR044G0871 Punica granatum HOM05D004198 ORTHO05D006470 1.4e-43 180.3 170 61.2
EL10Ac8g18953 Beta vulgaris HOM05D004198 ORTHO05D006470 4.1e-43 178.7 173 59.0
SalBow6G6057 Salvia bowleyana HOM05D004198 ORTHO05D006470 5.3e-43 178.3 171 57.9
Atru.chr7.1797 Acer truncatum HOM05D004198 ORTHO05D006470 1.5e-42 176.8 179 58.1
AUR62028335 Chenopodium quinoa HOM05D004198 ORTHO05D006470 1.5e-42 176.8 171 59.6
Os02g0783700 Oryza sativa ssp. japonica HOM05D004198 ORTHO05D006470 1.5e-42 176.8 167 61.1
AUR62025328 Chenopodium quinoa HOM05D004198 ORTHO05D006470 3.4e-42 175.6 172 58.7
Sed0024058 Sechium edule HOM05D004198 ORTHO05D006470 3.4e-42 175.6 182 53.8
Ah.09g228850 Amaranthus hybridus HOM05D004198 ORTHO05D006470 5.9e-42 174.9 184 59.2
PSO724G0393 Papaver somniferum HOM05D004198 ORTHO05D006470 5.9e-42 174.9 181 56.4
unitig_22.g6576 Utricularia gibba HOM05D004198 ORTHO05D006470 5.9e-42 174.9 179 55.3
PSO135G0314 Papaver somniferum HOM05D004198 ORTHO05D006470 1.0e-41 174.1 185 56.2
Zm00001eb192910 Zea mays HOM05D004198 ORTHO05D006470 1.7e-41 173.3 167 59.3
HPP92_009326 Vanilla planifolia HOM05D004198 ORTHO05D006470 3.8e-41 172.2 182 55.5
SEGI_08338 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 1.8e-35 153.3 184 51.1
CDE05G0881 Ceratophyllum demersum HOM05D004198 ORTHO05D006470 3.1e-27 125.9 170 42.4
Pp3c27_7000 Physcomitrium patens HOM05D004198 ORTHO05D006470 1.7e-25 120.2 162 45.7
SMO145G0289 Selaginella moellendorffii HOM05D004198 ORTHO05D006470 5.0e-25 118.6 163 41.7
Mapoly0072s0092 Marchantia polymorpha HOM05D004198 ORTHO05D006470 4.2e-24 115.5 169 44.4
CARHR241180 Cardamine hirsuta HOM05D004198 ORTHO05D006470 2.0e-18 96.7 64 73.4
PGSC0003DMG401015935 Solanum tuberosum HOM05D004198 ORTHO05D006470 2.0e-18 96.7 61 80.3
SEGI_37264 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 4.5e-18 95.5 67 71.6
RcHm_v2.0_Chr2g0121231 Rosa chinensis HOM05D004198 ORTHO05D006470 5.9e-18 95.1 64 76.6
RcHm_v2.0_Chr2g0169881 Rosa chinensis HOM05D004198 ORTHO05D006470 5.9e-18 95.1 64 76.6
DCAR_000446 Daucus carota HOM05D004198 ORTHO05D006470 2.3e-14 83.2 47 87.2
vmacro12815 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 2.3e-14 83.2 87 55.2
EL10Ac8g19732 Beta vulgaris HOM05D004198 ORTHO05D006470 1.0e-09 67.8 53 66.0


User provided reference genes

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