Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A790T66 Lonicera japonica HOM05D005790 ORTHO05D007464 1.3e-193 679.5 333 100.0
Dinv31817 Davidia involucrata HOM05D005790 ORTHO05D007464 1.2e-125 453.8 308 72.7
Actinidia37976 Actinidia chinensis HOM05D005790 ORTHO05D007464 6.5e-124 448.0 343 67.1
GSVIVG01009836001 Vitis vinifera HOM05D005790 ORTHO05D007464 2.1e-122 443.0 302 71.2
Cfa013914 Carpinus fangiana HOM05D005790 ORTHO05D007464 1.3e-121 440.3 308 70.8
Prupe.1G369900 Prunus persica HOM05D005790 ORTHO05D007464 1.3e-119 433.7 310 67.4
Manes.13G125500 Manihot esculenta HOM05D005790 ORTHO05D007464 8.2e-119 431.0 308 68.5
CiPaw.07G153400 Carya illinoinensis HOM05D005790 ORTHO05D007464 2.4e-118 429.5 308 69.5
CSS0048998 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 5.3e-118 428.3 305 68.9
CANSAT01G0079 Cannabis sativa HOM05D005790 ORTHO05D007464 5.3e-118 428.3 288 72.2
Aqoxy2G03135 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 1.5e-117 426.8 302 69.2
CSS0050056 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 2.6e-117 426.0 305 68.5
Peaxi162Scf00085g00528 Petunia axillaris HOM05D005790 ORTHO05D007464 7.7e-117 424.5 295 69.5
Potri.009G002100 Populus trichocarpa HOM05D005790 ORTHO05D007464 6.5e-116 421.4 343 62.7
TAR381G1687 Trochodendron aralioides HOM05D005790 ORTHO05D007464 1.1e-115 420.6 328 65.9
Ciclev10008674m.g Citrus clementina HOM05D005790 ORTHO05D007464 4.2e-115 418.7 293 70.0
Gohir.D06G001600 Gossypium hirsutum HOM05D005790 ORTHO05D007464 2.1e-114 416.4 301 67.1
Gohir.A06G005800 Gossypium hirsutum HOM05D005790 ORTHO05D007464 2.7e-114 416.0 301 67.1
PSO675G3524 Papaver somniferum HOM05D005790 ORTHO05D007464 2.7e-114 416.0 306 66.7
MD15G1016100 Malus domestica HOM05D005790 ORTHO05D007464 6.1e-114 414.8 342 61.4
COL.COLO4_26188 Corchorus olitorius HOM05D005790 ORTHO05D007464 1.0e-113 414.1 307 67.1
Gorai.010G006000 Gossypium raimondii HOM05D005790 ORTHO05D007464 1.4e-113 413.7 301 66.8
Lalb_Chr08g0246071 Lupinus albus HOM05D005790 ORTHO05D007464 1.4e-113 413.7 336 61.9
QL02p010842 Quercus lobata HOM05D005790 ORTHO05D007464 1.4e-113 413.7 375 58.9
TWI36G0257 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 2.3e-113 412.9 321 62.9
vmacro21704 Vaccinium macrocarpon HOM05D005790 ORTHO05D007464 5.1e-113 411.8 322 64.6
Lj1g0012079 Lotus japonicus HOM05D005790 ORTHO05D007464 8.8e-113 411.0 342 62.0
PGSC0003DMG400016117 Solanum tuberosum HOM05D005790 ORTHO05D007464 8.8e-113 411.0 295 66.8
Sopen11g005650 Solanum pennellii HOM05D005790 ORTHO05D007464 1.1e-112 410.6 295 66.8
Ca_02056_v3 Cicer arietinum L. HOM05D005790 ORTHO05D007464 2.5e-112 409.5 319 63.3
Solyc11g010910.3 Solanum lycopersicum HOM05D005790 ORTHO05D007464 3.3e-112 409.1 295 66.4
RcHm_v2.0_Chr6g0272131 Rosa chinensis HOM05D005790 ORTHO05D007464 4.3e-112 408.7 307 64.8
Cc10_g02010 Coffea canephora HOM05D005790 ORTHO05D007464 5.7e-112 408.3 296 66.2
DCAR_017500 Daucus carota HOM05D005790 ORTHO05D007464 7.4e-112 407.9 299 68.2
FvH4_2g39120 Fragaria vesca HOM05D005790 ORTHO05D007464 9.7e-112 407.5 343 58.6
PSO541G0736 Papaver somniferum HOM05D005790 ORTHO05D007464 9.7e-112 407.5 289 67.8
Glyma.06G026400 Glycine max HOM05D005790 ORTHO05D007464 1.7e-111 406.8 340 61.2
ECA247G0379 Erigeron canadensis HOM05D005790 ORTHO05D007464 3.7e-111 405.6 304 64.8
Medtr3g113190 Medicago truncatula HOM05D005790 ORTHO05D007464 3.7e-111 405.6 320 62.5
MD08G1017100 Malus domestica HOM05D005790 ORTHO05D007464 6.3e-111 404.8 366 57.9
PGR031G1208 Punica granatum HOM05D005790 ORTHO05D007464 1.2e-109 400.6 307 63.5
Thecc.08G038500 Theobroma cacao HOM05D005790 ORTHO05D007464 1.5e-109 400.2 307 65.8
MSTRG.18414 Avicennia marina HOM05D005790 ORTHO05D007464 2.6e-109 399.4 323 61.6
VMungo1309G1814 Vigna mungo HOM05D005790 ORTHO05D007464 5.9e-109 398.3 342 59.1
arahy.Tifrunner.gnm1.ann1.S6ZM1I Arachis hypogaea HOM05D005790 ORTHO05D007464 7.7e-109 397.9 333 61.0
arahy.Tifrunner.gnm1.ann1.BXK9RQ Arachis hypogaea HOM05D005790 ORTHO05D007464 1.0e-108 397.5 333 61.3
CARHR237760 Cardamine hirsuta HOM05D005790 ORTHO05D007464 1.0e-108 397.5 303 63.7
Sp7g27670 Schrenkiella parvula HOM05D005790 ORTHO05D007464 3.8e-108 395.6 305 63.0
AL7G22390 Arabidopsis lyrata HOM05D005790 ORTHO05D007464 6.5e-108 394.8 305 62.0
Lsat_1_v5_gn_1_16241 Lactuca sativa HOM05D005790 ORTHO05D007464 6.5e-108 394.8 304 64.1
Phvul.009G014700 Phaseolus vulgaris HOM05D005790 ORTHO05D007464 6.5e-108 394.8 340 58.5
FAN20G0385 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.9e-107 393.3 313 61.3
AT4G29860 Arabidopsis thaliana HOM05D005790 ORTHO05D007464 2.5e-107 392.9 305 63.0
HanXRQChr02g0043921 Helianthus annuus HOM05D005790 ORTHO05D007464 4.2e-107 392.1 301 65.1
CsaV3_1G045470 Cucumis sativus L. HOM05D005790 ORTHO05D007464 2.1e-106 389.8 339 59.0
Sed0009865 Sechium edule HOM05D005790 ORTHO05D007464 2.1e-106 389.8 301 63.8
Carub.0004s1477 Capsella rubella HOM05D005790 ORTHO05D007464 3.6e-106 389.0 305 62.6
MELO3C024652.2 Cucumis melo HOM05D005790 ORTHO05D007464 6.1e-106 388.3 338 58.9
Rhsim06G0026000 Rhododendron simsii HOM05D005790 ORTHO05D007464 7.9e-106 387.9 394 53.8
Thhalv10025433m.g Eutrema salsugineum HOM05D005790 ORTHO05D007464 3.9e-105 385.6 305 60.7
Sc02g0005160 Simmondsia chinensis HOM05D005790 ORTHO05D007464 3.9e-105 385.6 301 65.1
Eucgr.J01034 Eucalyptus grandis HOM05D005790 ORTHO05D007464 1.5e-104 383.6 338 59.8
AUR62014415 Chenopodium quinoa HOM05D005790 ORTHO05D007464 2.0e-104 383.3 330 59.1
BraA01t00778Z Brassica rapa HOM05D005790 ORTHO05D007464 7.4e-104 381.3 307 61.2
AUR62019151 Chenopodium quinoa HOM05D005790 ORTHO05D007464 1.3e-103 380.6 303 61.7
FAN15G2431 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.3e-103 380.6 346 55.5
A01p08300 Brassica napus HOM05D005790 ORTHO05D007464 1.7e-103 380.2 304 61.5
CsaV3_UNG233270 Cucumis sativus L. HOM05D005790 ORTHO05D007464 6.3e-103 378.3 313 60.4
ClCG05G018560 Citrullus lanatus HOM05D005790 ORTHO05D007464 8.2e-103 377.9 331 59.2
FAN20G1847 Fragaria x ananassa HOM05D005790 ORTHO05D007464 8.2e-103 377.9 342 56.1
EL10Ac1g00445 Beta vulgaris HOM05D005790 ORTHO05D007464 1.1e-102 377.5 305 61.3
C01p09340 Brassica napus HOM05D005790 ORTHO05D007464 1.1e-102 377.5 309 59.5
BolC1t00922H Brassica oleracea HOM05D005790 ORTHO05D007464 1.1e-102 377.5 309 59.5
Duzib093G0196 Durio zibethinus HOM05D005790 ORTHO05D007464 4.4e-96 355.5 311 60.5
Haze_22599 Corylus avellana HOM05D005790 ORTHO05D007464 9.7e-96 354.4 418 48.8
Atru.chr13.345 Acer truncatum HOM05D005790 ORTHO05D007464 2.2e-95 353.2 218 75.2
ATR0945G002 Amborella trichopoda HOM05D005790 ORTHO05D007464 3.7e-95 352.4 322 55.3
Zm00001eb378230 Zea mays HOM05D005790 ORTHO05D007464 6.3e-95 351.7 302 56.0
Nn5g29250 Nelumbo nucifera HOM05D005790 ORTHO05D007464 5.3e-94 348.6 292 62.3
SGA_v2.0_scaffold8G04609 Striga asiatica HOM05D005790 ORTHO05D007464 5.3e-94 348.6 313 55.3
unitig_26.g10135 Utricularia gibba HOM05D005790 ORTHO05D007464 7.7e-93 344.7 311 53.7
Os06g0131100 Oryza sativa ssp. japonica HOM05D005790 ORTHO05D007464 1.5e-91 340.5 290 57.6
Aqoxy4G01228 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 2.5e-91 339.7 252 66.3
SHI02412 Sapria himalayana HOM05D005790 ORTHO05D007464 2.5e-91 339.7 306 55.9
Migut.D00577 Erythranthe guttata HOM05D005790 ORTHO05D007464 2.2e-87 326.6 319 53.9
THA.LOC104811397 Tarenaya hassleriana HOM05D005790 ORTHO05D007464 3.1e-86 322.8 346 50.6
Atru.BG.234.p Acer truncatum HOM05D005790 ORTHO05D007464 2.7e-85 319.7 279 59.5
SalBow1G3128 Salvia bowleyana HOM05D005790 ORTHO05D007464 2.7e-85 319.7 213 70.0
Aa31LG4G5850 Aethionema arabicum HOM05D005790 ORTHO05D007464 1.6e-82 310.5 298 55.4
TPR.G30295 Trifolium pratense HOM05D005790 ORTHO05D007464 2.2e-79 300.1 169 79.3
Oeu061776.2 Olea europaea HOM05D005790 ORTHO05D000708 6.3e-79 298.5 367 46.9
Sabra09G0000400 Salix brachista HOM05D005790 ORTHO05D007464 5.4e-78 295.4 419 43.0
CDE05G1328 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 1.5e-72 277.3 169 72.8
SMO147G0253 Selaginella moellendorffii HOM05D005790 ORTHO05D007464 1.8e-70 270.4 300 46.7
Mapoly0014s0217 Marchantia polymorpha HOM05D005790 ORTHO05D007464 1.2e-69 267.7 319 46.7
Hund17229 Selenicereus undatus HOM05D005790 ORTHO05D007464 1.4e-65 254.2 150 76.0
FAN27G0896 Fragaria x ananassa HOM05D005790 ORTHO05D007464 3.7e-63 246.1 349 41.5
Psat5g014760 Pisum sativum HOM05D005790 ORTHO05D007464 2.4e-62 243.4 141 75.9
Ah.05g171860 Amaranthus hybridus HOM05D005790 ORTHO05D007464 9.2e-62 241.5 231 52.8
Pp3c20_12860 Physcomitrium patens HOM05D005790 ORTHO05D007464 9.5e-59 231.5 278 43.9
Actinidia29793 Actinidia chinensis HOM05D005790 ORTHO05D007464 1.1e-54 218.0 317 45.4
Nitab4.5_0000402g0130 Nicotiana tabacum HOM05D005790 ORTHO05D007464 3.5e-53 213.0 121 81.0
TWI36G0035 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 3.9e-52 209.5 133 71.4
Gorai.010G006300 Gossypium raimondii HOM05D005790 ORTHO05D007464 2.3e-49 200.3 114 78.9
RcHm_v2.0_Chr6g0302231 Rosa chinensis HOM05D005790 ORTHO05D007464 4.0e-49 199.5 186 54.8
CBR_g7976 Chara braunii HOM05D001993 ORTHO05D004040 8.3e-47 191.8 212 47.6
RcHm_v2.0_Chr4g0408871 Rosa chinensis HOM05D005790 ORTHO05D007464 1.4e-46 191.0 188 53.7
MBI09_g08426_MAGBIO Magnolia biondii HOM05D005790 ORTHO05D007464 2.1e-45 187.2 278 42.8
CBR_g24442 Chara braunii HOM05D005790 ORTHO05D007464 3.6e-42 176.4 234 42.7
AagrBONN_evm.TU.Sc2ySwM_369.164 Anthoceros agrestis HOM05D005790 ORTHO05D007464 9.3e-38 161.8 242 39.7
Nitab4.5_0000402g0120 Nicotiana tabacum HOM05D005790 ORTHO05D007464 6.0e-37 159.1 147 58.5
RcHm_v2.0_Chr6g0302371 Rosa chinensis HOM05D005790 ORTHO05D007464 3.0e-36 156.8 179 47.5
Psat5g014800 Pisum sativum HOM05D005790 ORTHO05D007464 5.1e-36 156.0 174 50.0
Cre02.g076850 Chlamydomonas reinhardtii HOM05D005790 ORTHO05D007464 5.6e-27 125.9 345 29.0
TAR625G0591 Trochodendron aralioides HOM05D000460 ORTHO05D000333 1.3e-20 104.8 176 42.0
RcHm_v2.0_Chr6g0302301 Rosa chinensis HOM05D005790 ORTHO05D007464 1.8e-20 104.4 87 52.9
Cpa.g.sc140.30 Carica papaya HOM05D005790 ORTHO05D007464 7.4e-19 99.0 54 83.3
Cfa025606 Carpinus fangiana HOM05D005790 ORTHO05D007464 1.3e-18 98.2 197 36.5
MCO14G170 Micromonas commoda HOM05D005790 ORTHO05D007464 9.0e-17 92.0 364 25.8
HPP92_020940 Vanilla planifolia HOM05D005790 ORTHO05D007464 1.0e-15 88.6 53 73.6
SEGI_12232 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 2.9e-15 87.0 59 59.3
PRCOL_00000381 Prasinoderma coloniale HOM05D005790 ORTHO05D007832 4.2e-14 83.2 309 30.4
SEGI_31412 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 1.6e-13 81.3 186 33.3
Cpa.g.sc140.27 Carica papaya HOM05D005790 ORTHO05D007464 1.8e-12 77.8 75 49.3
TPR.G30287 Trifolium pratense HOM05D005790 ORTHO05D007464 3.3e-11 73.6 108 39.8
Hma1.2p1_1776F.1_g301940 Hydrangea macrophylla HOM05D005790 ORTHO05D007464 1.4e-09 68.2 40 72.5
HPP92_020941 Vanilla planifolia HOM05D005790 ORTHO05D007464 1.3e-07 61.6 68 50.0
COL.COLO4_38433 Corchorus olitorius HOM05D005790 ORTHO05D030850 1.1e-06 58.5 31 64.5
CDE05G1505 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 1.4e-06 58.2 39 61.5
RhsimUnG0148700 Rhododendron simsii HOM05D000113 ORTHO05D002571 7.2e-06 55.8 35 74.3


User provided reference genes

Program Settings