Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A782T79 Lonicera japonica HOM05D005338 ORTHO05D006550 4.0e-93 344.7 173 100.0
Actinidia15288 Actinidia chinensis HOM05D005338 ORTHO05D006550 3.3e-79 298.5 173 86.7
QL02p007082 Quercus lobata HOM05D005338 ORTHO05D006550 4.3e-79 298.1 173 85.5
Prupe.1G517500 Prunus persica HOM05D005338 ORTHO05D006550 4.8e-78 294.7 173 83.8
GSVIVG01009622001 Vitis vinifera HOM05D005338 ORTHO05D006550 6.2e-78 294.3 173 85.0
Prupe.1G518900 Prunus persica HOM05D005338 ORTHO05D006550 1.4e-77 293.1 173 83.8
CSS0015965 Camellia sinensis var. sinensis HOM05D005338 ORTHO05D006550 3.1e-77 292.0 173 84.4
Nn8g40744 Nelumbo nucifera HOM05D005338 ORTHO05D006550 3.1e-77 292.0 173 83.2
Ciclev10026443m.g Citrus clementina HOM05D005338 ORTHO05D006550 4.0e-77 291.6 173 83.8
Cpa.g.sc337.5 Carica papaya HOM05D005338 ORTHO05D006550 5.3e-77 291.2 173 83.2
ClCG08G015430 Citrullus lanatus HOM05D005338 ORTHO05D006550 1.2e-76 290.0 173 83.8
CsaV3_2G028360 Cucumis sativus L. HOM05D005338 ORTHO05D006550 1.2e-76 290.0 173 83.8
TWI74G1059 Tripterygium wilfordii HOM05D005338 ORTHO05D006550 1.2e-76 290.0 173 82.7
Duzib147G0908 Durio zibethinus HOM05D005338 ORTHO05D006550 1.5e-76 289.7 173 83.2
Gorai.007G236400 Gossypium raimondii HOM05D005338 ORTHO05D006550 1.5e-76 289.7 173 83.8
SGA_v2.0_scaffold4G02341 Striga asiatica HOM05D005338 ORTHO05D006550 1.5e-76 289.7 173 83.8
CiPaw.15G069200 Carya illinoinensis HOM05D005338 ORTHO05D006550 2.0e-76 289.3 173 82.1
Gohir.A11G203500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 3.4e-76 288.5 173 83.2
Cfa002226 Carpinus fangiana HOM05D005338 ORTHO05D006550 4.4e-76 288.1 173 82.7
Hma1.2p1_0471F.1_g159310 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 4.4e-76 288.1 173 83.8
arahy.Tifrunner.gnm1.ann1.82M2ZV Arachis hypogaea HOM05D005338 ORTHO05D006550 5.8e-76 287.7 173 82.1
arahy.Tifrunner.gnm1.ann1.F09FAE Arachis hypogaea HOM05D005338 ORTHO05D006550 5.8e-76 287.7 173 82.1
arahy.Tifrunner.gnm1.ann1.N4382H Arachis hypogaea HOM05D005338 ORTHO05D006550 5.8e-76 287.7 173 82.1
arahy.Tifrunner.gnm1.ann1.VZ94AI Arachis hypogaea HOM05D005338 ORTHO05D006550 5.8e-76 287.7 173 82.1
Lsat_1_v5_gn_1_19481 Lactuca sativa HOM05D005338 ORTHO05D006550 5.8e-76 287.7 173 85.0
vmacro21598 Vaccinium macrocarpon HOM05D005338 ORTHO05D006550 5.8e-76 287.7 173 82.7
Gorai.003G040400 Gossypium raimondii HOM05D005338 ORTHO05D006550 7.6e-76 287.3 173 82.7
Oeu012884.1 Olea europaea HOM05D005338 ORTHO05D006550 7.6e-76 287.3 173 82.7
Nitab4.5_0000154g0040 Nicotiana tabacum HOM05D005338 ORTHO05D006550 9.9e-76 287.0 173 82.1
Cfa018461 Carpinus fangiana HOM05D005338 ORTHO05D006550 1.3e-75 286.6 173 82.7
Gohir.D03G039200 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.7e-75 286.2 173 82.7
Sed0010775 Sechium edule HOM05D005338 ORTHO05D006550 1.7e-75 286.2 173 82.1
Gohir.D11G220100 Gossypium hirsutum HOM05D005338 ORTHO05D006550 2.2e-75 285.8 173 82.7
MSTRG.2958 Avicennia marina HOM05D005338 ORTHO05D006550 2.9e-75 285.4 173 82.7
Eucgr.F01508 Eucalyptus grandis HOM05D005338 ORTHO05D006550 2.9e-75 285.4 173 82.1
Gohir.A02G128500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 2.9e-75 285.4 173 82.1
Nitab4.5_0003384g0030 Nicotiana tabacum HOM05D005338 ORTHO05D006550 3.8e-75 285.0 173 81.5
Migut.H00565 Erythranthe guttata HOM05D005338 ORTHO05D006550 4.9e-75 284.6 173 81.5
VMungo1215G3044 Vigna mungo HOM05D005338 ORTHO05D006550 4.9e-75 284.6 173 81.5
MBI01_g22964_MAGBIO Magnolia biondii HOM05D005338 ORTHO05D006550 6.4e-75 284.3 173 80.9
Cc07_g04760 Coffea canephora HOM05D005338 ORTHO05D006550 1.1e-74 283.5 173 82.7
Lj4g0021487 Lotus japonicus HOM05D005338 ORTHO05D006550 1.4e-74 283.1 173 80.9
Glyma.15G160500 Glycine max HOM05D005338 ORTHO05D006550 1.9e-74 282.7 173 80.3
Lalb_Chr15g0083931 Lupinus albus HOM05D005338 ORTHO05D006550 1.9e-74 282.7 173 80.3
Thhalv10000318m.g Eutrema salsugineum HOM05D005338 ORTHO05D006550 3.2e-74 282.0 173 78.6
Thecc.01G098200 Theobroma cacao HOM05D005338 ORTHO05D006550 3.2e-74 282.0 173 81.5
VMungo1309G1758 Vigna mungo HOM05D005338 ORTHO05D006550 3.2e-74 282.0 173 80.3
AT2G22370 Arabidopsis thaliana HOM05D005338 ORTHO05D006550 4.2e-74 281.6 173 78.6
SalBow1G1006 Salvia bowleyana HOM05D000168 ORTHO05D006550 4.2e-74 281.6 173 81.5
AL4G11870 Arabidopsis lyrata HOM05D005338 ORTHO05D006550 5.4e-74 281.2 173 78.0
Glyma.09G054300 Glycine max HOM05D005338 ORTHO05D006550 5.4e-74 281.2 173 80.3
Phvul.009G240644 Phaseolus vulgaris HOM05D005338 ORTHO05D006550 5.4e-74 281.2 173 80.9
EL10Ac3g06218 Beta vulgaris HOM05D005338 ORTHO05D006550 7.1e-74 280.8 173 79.8
RcHm_v2.0_Chr5g0038311 Rosa chinensis HOM05D005338 ORTHO05D006550 7.1e-74 280.8 173 80.3
Peaxi162Scf00479g00910 Petunia axillaris HOM05D005338 ORTHO05D006550 9.3e-74 280.4 173 80.9
CANSAT56G3114 Cannabis sativa HOM05D005338 ORTHO05D006550 1.6e-73 279.6 173 79.2
CARHR113580 Cardamine hirsuta HOM05D005338 ORTHO05D006550 2.1e-73 279.3 173 78.0
FvH4_5g37300 Fragaria vesca HOM05D005338 ORTHO05D006550 2.7e-73 278.9 173 80.3
FAN18G4080 Fragaria x ananassa HOM05D005338 ORTHO05D006550 2.7e-73 278.9 173 80.3
THA.LOC104824882 Tarenaya hassleriana HOM05D005338 ORTHO05D006550 2.7e-73 278.9 173 78.6
COL.COLO4_27273 Corchorus olitorius HOM05D005338 ORTHO05D006550 3.5e-73 278.5 173 80.9
FAN13G0739 Fragaria x ananassa HOM05D005338 ORTHO05D006550 6.0e-73 277.7 173 79.2
Glyma.18G135700 Glycine max HOM05D005338 ORTHO05D006550 6.0e-73 277.7 173 79.2
Medtr2g438770 Medicago truncatula HOM05D005338 ORTHO05D006550 6.0e-73 277.7 173 79.8
PGR083G0298 Punica granatum HOM05D005338 ORTHO05D006550 6.0e-73 277.7 173 78.6
FAN04G2403 Fragaria x ananassa HOM05D005338 ORTHO05D006550 7.8e-73 277.3 173 79.8
FAN08G1597 Fragaria x ananassa HOM05D005338 ORTHO05D006550 7.8e-73 277.3 173 79.8
Manes.13G095300 Manihot esculenta HOM05D005338 ORTHO05D006550 7.8e-73 277.3 175 82.3
CAN.G162.113 Capsicum annuum HOM05D005338 ORTHO05D006550 1.0e-72 276.9 173 79.2
Medtr5g044730 Medicago truncatula HOM05D005338 ORTHO05D006550 1.7e-72 276.2 173 79.2
Hund12454 Selenicereus undatus HOM05D005338 ORTHO05D006550 1.7e-72 276.2 173 79.2
Carub.0004s0155 Capsella rubella HOM05D005338 ORTHO05D006550 2.3e-72 275.8 173 76.9
CANSAT25G1955 Cannabis sativa HOM05D005338 ORTHO05D006550 3.0e-72 275.4 173 79.2
Rhsim06G0038600 Rhododendron simsii HOM05D005338 ORTHO05D006550 3.9e-72 275.0 187 77.5
Sabra07G0078500 Salix brachista HOM05D005338 ORTHO05D006550 5.1e-72 274.6 173 79.2
TPR.G29215 Trifolium pratense HOM05D005338 ORTHO05D006550 5.1e-72 274.6 173 79.2
Haze_25403 Corylus avellana HOM05D005338 ORTHO05D006550 1.1e-71 273.5 209 69.4
Solyc06g008010.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 4.3e-71 271.6 173 78.6
PGSC0003DMG400014704 Solanum tuberosum HOM05D005338 ORTHO05D006550 7.3e-71 270.8 173 78.0
Sopen06g002850 Solanum pennellii HOM05D005338 ORTHO05D006550 9.6e-71 270.4 173 78.0
Ca_02026_v3 Cicer arietinum L. HOM05D005338 ORTHO05D006550 1.3e-70 270.0 166 80.7
DCAR_003287 Daucus carota HOM05D005338 ORTHO05D006550 1.3e-70 270.0 173 78.0
BcaC02g08711 Brassica carinata HOM05D005338 ORTHO05D006550 1.6e-70 269.6 174 77.0
C04p51430 Brassica napus HOM05D005338 ORTHO05D006550 1.6e-70 269.6 174 77.0
BcaC02g08666 Brassica carinata HOM05D005338 ORTHO05D006550 2.1e-70 269.2 174 76.4
CDE07G0352 Ceratophyllum demersum HOM05D005338 ORTHO05D006550 2.1e-70 269.2 173 78.6
A04p16850 Brassica napus HOM05D005338 ORTHO05D006550 3.6e-70 268.5 174 76.4
BraA04t17318Z Brassica rapa HOM05D005338 ORTHO05D006550 3.6e-70 268.5 174 76.4
Psat1g148520 Pisum sativum HOM05D005338 ORTHO05D006550 3.6e-70 268.5 178 75.3
Potri.007G095300 Populus trichocarpa HOM05D005338 ORTHO05D006550 3.6e-70 268.5 173 79.2
Aqoxy6G01960 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 4.8e-70 268.1 173 76.3
BolC4t26735H Brassica oleracea HOM05D005338 ORTHO05D006550 1.4e-69 266.5 174 76.4
HanXRQChr04g0104391 Helianthus annuus HOM05D005338 ORTHO05D006550 2.4e-69 265.8 176 75.0
ECA247G2066 Erigeron canadensis HOM05D005338 ORTHO05D006550 4.0e-69 265.0 175 76.6
Aqoxy1G02678 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 1.2e-68 263.5 173 75.1
MD15G1369800 Malus domestica HOM05D005338 ORTHO05D006550 1.2e-68 263.5 176 74.4
Sp4g01410 Schrenkiella parvula HOM05D005338 ORTHO05D006550 2.0e-68 262.7 162 77.2
unitig_744.g23988 Utricularia gibba HOM05D005338 ORTHO05D006550 2.2e-67 259.2 172 77.3
CAN.G176.23 Capsicum annuum HOM05D005338 ORTHO05D006550 6.4e-67 257.7 172 75.6
PSO017G6030 Papaver somniferum HOM05D005338 ORTHO05D006550 1.1e-66 256.9 173 72.3
Zm00001eb236490 Zea mays HOM05D005338 ORTHO05D006550 1.4e-66 256.5 173 72.3
Os02g0193900 Oryza sativa ssp. japonica HOM05D005338 ORTHO05D006550 2.7e-65 252.3 173 70.5
ATR0767G114 Amborella trichopoda HOM05D005338 ORTHO05D006550 4.6e-65 251.5 173 71.7
PSO170G4003 Papaver somniferum HOM05D005338 ORTHO05D006550 1.8e-64 249.6 173 71.1
Aa31LG7G14440 Aethionema arabicum HOM05D005338 ORTHO05D006550 2.3e-64 249.2 232 56.0
HPP92_021909 Vanilla planifolia HOM05D005338 ORTHO05D006550 5.6e-63 244.6 173 68.2
Sopen03g010490 Solanum pennellii HOM05D005338 ORTHO05D006550 9.6e-63 243.8 173 70.5
Sopen03g021660 Solanum pennellii HOM05D005338 ORTHO05D006550 9.6e-63 243.8 173 70.5
Sopen03g021630 Solanum pennellii HOM05D005338 ORTHO05D006550 6.2e-62 241.1 173 69.9
Dinv36026 Davidia involucrata HOM05D005338 ORTHO05D006550 1.2e-60 236.9 173 71.7
MELO3C010912.2 Cucumis melo HOM05D005338 ORTHO05D006550 2.9e-59 232.3 141 83.7
SHI19279 Sapria himalayana HOM05D005338 ORTHO05D006550 3.5e-57 225.3 173 68.8
AUR62040070 Chenopodium quinoa HOM05D005338 ORTHO05D006550 3.7e-54 215.3 141 76.6
SMO236G0045 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 1.2e-52 210.3 173 60.7
Pp3c14_750 Physcomitrium patens HOM05D005338 ORTHO05D006550 7.6e-52 207.6 176 53.4
Mapoly0023s0045 Marchantia polymorpha HOM05D005338 ORTHO05D006550 8.7e-48 194.1 173 55.5
RcHm_v2.0_Chr7g0238871 Rosa chinensis HOM05D005338 ORTHO05D006550 4.3e-47 191.8 110 81.8
RcHm_v2.0_Chr7g0238911 Rosa chinensis HOM05D005338 ORTHO05D006550 2.8e-46 189.1 132 73.5
SalBow1G1231 Salvia bowleyana HOM05D005338 ORTHO05D006550 6.3e-46 188.0 125 76.8
RcHm_v2.0_Chr5g0034471 Rosa chinensis HOM05D005338 ORTHO05D006550 1.5e-44 183.3 121 78.5
SMO236G0041 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 1.2e-41 173.7 163 56.4
AagrBONN_evm.TU.Sc2ySwM_362.1720 Anthoceros agrestis HOM05D005338 ORTHO05D006550 2.1e-41 172.9 173 50.3
TAR628G0003 Trochodendron aralioides HOM05D005338 ORTHO05D006550 2.0e-39 166.4 112 74.1
Sopen00g003620 Solanum pennellii HOM05D005338 ORTHO05D006550 6.3e-38 161.4 120 65.8
Solyc03g046360.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 4.1e-37 158.7 173 50.9
Hma1.2p1_0023F.1_g015170 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 2.0e-36 156.4 119 68.9
Sc15g0006680 Simmondsia chinensis HOM05D005338 ORTHO05D006550 7.7e-36 154.5 112 70.5
Sopen00g011030 Solanum pennellii HOM05D005338 ORTHO05D006550 9.4e-26 120.9 173 42.2
Sopen03g021680 Solanum pennellii HOM05D005338 ORTHO05D006550 1.6e-17 93.6 169 36.7
SEGI_27973 Sequoiadendron giganteum HOM05D005338 ORTHO05D006550 8.0e-17 91.3 53 75.5
BcaC04g23293 Brassica carinata HOM05D005338 ORTHO05D006550 6.8e-16 88.2 54 74.1
RcHm_v2.0_Chr7g0238881 Rosa chinensis HOM05D005338 ORTHO05D006550 1.5e-15 87.0 57 77.2
TPR.G5804 Trifolium pratense HOM05D005338 ORTHO05D006550 6.3e-14 81.6 50 80.0
Atru.chr1.3597 Acer truncatum HOM05D005338 ORTHO05D006550 1.5e-10 70.5 61 60.7
MD08G1183200 Malus domestica HOM05D005338 ORTHO05D006550 9.4e-10 67.8 81 44.4
TAR628G1182 Trochodendron aralioides HOM05D005338 ORTHO05D006550 9.4e-10 67.8 35 85.7
Atru.chr12.488 Acer truncatum HOM05D005338 ORTHO05D006550 2.7e-09 66.2 33 87.9


User provided reference genes

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