Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A310T24 Lonicera japonica HOM05D003876 ORTHO05D004560 0.0e+00 1135.9 562 100.0
Lj4C311T3 Lonicera japonica HOM05D003876 ORTHO05D004560 1.2e-258 896.3 651 75.9
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 5.5e-192 674.9 658 58.5
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 4.3e-189 665.2 658 58.1
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 5.4e-163 578.6 686 51.0
vmacro22462 Vaccinium macrocarpon HOM05D003876 ORTHO05D004560 1.8e-155 553.5 662 50.3
Rhsim03G0118500 Rhododendron simsii HOM05D003876 ORTHO05D004560 4.2e-152 542.3 656 49.1
HanXRQChr14g0456751 Helianthus annuus HOM05D003876 ORTHO05D004560 1.8e-150 537.0 654 49.8
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 2.5e-144 516.5 662 48.6
Ciclev10007236m.g Citrus clementina HOM05D003876 ORTHO05D004560 5.6e-144 515.4 662 46.5
DCAR_015293 Daucus carota HOM05D003876 ORTHO05D004560 1.6e-143 513.8 651 48.5
CSS0021387 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 2.1e-143 513.5 588 51.7
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 1.4e-142 510.8 666 47.3
AUR62020460 Chenopodium quinoa HOM05D003876 ORTHO05D004560 1.5e-141 507.3 663 46.6
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 5.8e-141 505.4 659 46.7
AUR62015755 Chenopodium quinoa HOM05D003876 ORTHO05D004560 2.4e-139 500.0 662 45.6
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 9.5e-136 488.0 663 45.9
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 2.1e-135 486.9 665 45.6
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 2.8e-135 486.5 647 46.1
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 6.2e-135 485.3 659 44.6
Sc07g0002730 Simmondsia chinensis HOM05D003876 ORTHO05D004560 8.9e-134 481.5 648 44.9
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 5.8e-133 478.8 663 45.9
Cc02_g11170 Coffea canephora HOM05D003876 ORTHO05D004560 4.9e-132 475.7 662 45.2
CiPaw.11G188300 Carya illinoinensis HOM05D003876 ORTHO05D004560 6.4e-132 475.3 660 46.1
ECA238G2706 Erigeron canadensis HOM05D003876 ORTHO05D004560 2.7e-130 469.9 621 46.7
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 6.0e-130 468.8 658 44.7
Thecc.07G169600 Theobroma cacao HOM05D003876 ORTHO05D004560 1.0e-129 468.0 653 44.7
Peaxi162Scf01227g00036 Petunia axillaris HOM05D003876 ORTHO05D004560 1.7e-129 467.2 656 43.8
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 3.9e-129 466.1 650 44.9
Ah.14g087580 Amaranthus hybridus HOM05D003876 ORTHO05D004560 3.3e-128 463.0 644 43.6
MSTRG.9162 Avicennia marina HOM05D003876 ORTHO05D004560 2.1e-127 460.3 660 44.1
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 3.6e-127 459.5 664 44.1
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 3.6e-127 459.5 654 44.3
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 8.1e-127 458.4 646 43.3
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 4.0e-126 456.1 659 44.2
Sopen02g015700 Solanum pennellii HOM05D003876 ORTHO05D004560 5.2e-126 455.7 656 44.1
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 6.8e-126 455.3 664 43.7
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 1.5e-125 454.1 680 43.7
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 2.0e-125 453.8 667 43.5
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 1.3e-124 451.1 653 43.6
Nn1g07120 Nelumbo nucifera HOM05D003876 ORTHO05D004560 3.7e-124 449.5 657 44.6
CAN.G93.17 Capsicum annuum HOM05D003876 ORTHO05D004560 1.9e-123 447.2 645 44.3
TWI38G0366 Tripterygium wilfordii HOM05D003876 ORTHO05D004560 1.6e-122 444.1 692 42.1
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 6.0e-122 442.2 655 42.7
SalBow4G0132 Salvia bowleyana HOM05D003876 ORTHO05D004560 7.8e-122 441.8 647 43.0
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 1.0e-121 441.4 661 44.3
SalBow4G0850 Salvia bowleyana HOM05D003876 ORTHO05D004560 2.3e-121 440.3 647 42.8
SGA_v2.0_scaffold13G06370 Striga asiatica HOM05D003876 ORTHO05D004560 1.5e-120 437.6 659 42.3
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 3.3e-120 436.4 650 42.3
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 4.4e-117 426.0 634 45.9
MBI16_g24182_MAGBIO Magnolia biondii HOM05D003876 ORTHO05D004560 4.2e-115 419.5 697 39.7
COL.COLO4_07981 Corchorus olitorius HOM05D003876 ORTHO05D004560 1.1e-112 411.4 622 42.9
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 3.3e-112 409.8 647 42.2
ClCG09G008390 Citrullus lanatus HOM05D003876 ORTHO05D004560 5.6e-112 409.1 648 42.1
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 1.1e-110 404.8 650 40.0
CsaV3_7G026680 Cucumis sativus L. HOM05D003876 ORTHO05D004560 1.1e-110 404.8 640 41.9
MELO3C021122.2 Cucumis melo HOM05D003876 ORTHO05D004560 1.8e-110 404.1 645 41.4
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 4.0e-110 402.9 647 40.6
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 4.0e-110 402.9 647 40.8
THA.LOC104817664 Tarenaya hassleriana HOM05D003876 ORTHO05D004560 9.0e-110 401.7 645 40.6
AL7G25820 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 1.5e-109 401.0 651 40.6
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 2.0e-109 400.6 635 40.8
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 3.4e-109 399.8 668 40.7
Glyma.18G096800 Glycine max HOM05D003876 ORTHO05D004560 7.6e-109 398.7 654 40.1
TPR.G34799 Trifolium pratense HOM05D003876 ORTHO05D004560 1.3e-108 397.9 656 40.5
Migut.F01968 Erythranthe guttata HOM05D003876 ORTHO05D004560 3.8e-108 396.4 645 40.0
Migut.D01652 Erythranthe guttata HOM05D003876 ORTHO05D004560 1.4e-107 394.4 644 39.3
AT4G27010 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 1.2e-106 391.3 658 40.4
Aqoxy1G03250 Aquilegia oxysepala HOM05D003876 ORTHO05D004560 2.1e-106 390.6 655 40.0
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 3.5e-106 389.8 644 39.4
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.3e-105 387.9 644 39.4
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 1.3e-105 387.9 655 39.1
Lj6g0024588 Lotus japonicus HOM05D003876 ORTHO05D004560 1.3e-105 387.9 643 40.9
Psat7g030440 Pisum sativum HOM05D003876 ORTHO05D004560 5.1e-105 386.0 645 39.8
Aa31LG5G10400 Aethionema arabicum HOM05D003876 ORTHO05D004560 2.5e-104 383.6 652 38.8
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 1.3e-103 381.3 650 39.4
Medtr3g051730 Medicago truncatula HOM05D003876 ORTHO05D004560 1.2e-101 374.8 654 39.0
PSO541G2928 Papaver somniferum HOM05D003876 ORTHO05D004560 5.1e-97 359.4 685 37.8
PSO675G8409 Papaver somniferum HOM05D003876 ORTHO05D004560 1.1e-96 358.2 667 37.9
Sp7g24970 Schrenkiella parvula HOM05D003876 ORTHO05D004560 4.3e-96 356.3 719 36.4
AL1G51930 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 2.9e-92 343.6 608 39.0
CDE12G0710 Ceratophyllum demersum HOM05D003876 ORTHO05D004560 3.8e-92 343.2 595 38.3
VMungo0540G1458 Vigna mungo HOM05D003876 ORTHO05D004560 3.0e-89 333.6 634 36.8
BolC1t02247H Brassica oleracea HOM05D003876 ORTHO05D004560 1.9e-88 330.9 637 37.5
C01p23130 Brassica napus HOM05D003876 ORTHO05D004560 1.1e-86 325.1 644 37.3
BcaNung03576 Brassica carinata HOM05D003876 ORTHO05D004560 4.1e-86 323.2 642 36.9
ATR0752G176 Amborella trichopoda HOM05D003876 ORTHO05D004560 2.0e-85 320.9 733 34.2
A01p18170 Brassica napus HOM05D003876 ORTHO05D004560 7.6e-85 318.9 643 36.2
BraA01t01772Z Brassica rapa HOM05D003876 ORTHO05D004560 7.6e-85 318.9 643 36.2
AT1G72270 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 3.0e-81 307.0 638 36.5
AL2G26020 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 4.3e-80 303.1 602 36.9
Zm00001eb070180 Zea mays HOM05D003876 ORTHO05D004560 3.7e-79 300.1 688 32.4
Nitab4.5_0014432g0010 Nicotiana tabacum HOM05D003876 ORTHO05D004560 2.4e-78 297.4 361 48.2
Nitab4.5_0000071g0230 Nicotiana tabacum HOM05D003876 ORTHO05D004560 2.0e-77 294.3 349 49.9
Thhalv10009735m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 1.8e-70 271.2 620 36.1
SHI26626 Sapria himalayana HOM05D003876 ORTHO05D004560 4.7e-66 256.5 649 33.0
AL1G52050 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 2.3e-65 254.2 590 34.7
HPP92_009565 Vanilla planifolia HOM05D003876 ORTHO05D004560 1.3e-55 221.9 643 30.0
Haze_08116 Corylus avellana HOM05D003876 ORTHO05D004560 9.1e-54 215.7 215 54.0
Gohir.A05G328616 Gossypium hirsutum HOM05D003876 ORTHO05D004560 2.5e-51 207.6 204 56.9
SEGI_05754 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 4.2e-51 206.8 697 28.8
Thhalv10024185m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 9.4e-51 205.7 330 40.3
Ciclev10007833m.g Citrus clementina HOM05D003876 ORTHO05D004560 1.0e-49 202.2 298 42.6
BcaNung03573 Brassica carinata HOM05D003876 ORTHO05D004560 1.7e-44 184.9 336 39.3
CARHR229820 Cardamine hirsuta HOM05D003876 ORTHO05D004560 1.2e-40 172.2 323 37.8
Os04g0625350 Oryza sativa ssp. japonica HOM05D003876 ORTHO05D004560 2.0e-40 171.4 167 52.7
SMO146G0332 Selaginella moellendorffii HOM05D003876 ORTHO05D004560 5.4e-38 163.3 602 27.4
Pp3c2_30140 Physcomitrium patens HOM05D003876 ORTHO05D004560 2.3e-36 157.9 676 25.0
Mapoly0015s0081 Marchantia polymorpha HOM05D003876 ORTHO05D004560 4.3e-35 153.7 637 26.2
AagrBONN_evm.TU.Sc2ySwM_362.592 Anthoceros agrestis HOM05D003876 ORTHO05D004560 4.4e-24 117.1 434 26.3
Carub.0007s1383 Capsella rubella HOM05D003876 ORTHO05D004560 1.3e-23 115.5 276 33.0
Solyc02g065500.4 Solanum lycopersicum HOM05D003876 ORTHO05D004560 1.2e-18 99.0 76 59.2
Carub.0004s0902 Capsella rubella HOM05D003876 ORTHO05D004560 6.2e-18 96.7 278 31.7
Ca_01853_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 5.8e-16 90.1 110 50.0
HPP92_009518 Vanilla planifolia HOM05D003876 ORTHO05D004560 3.7e-15 87.4 190 34.7
QL08p010686 Quercus lobata HOM05D003876 ORTHO05D004560 6.6e-12 76.6 62 64.5
QL08p010601 Quercus lobata HOM05D003876 ORTHO05D004560 5.6e-11 73.6 127 37.8
QL08p010640 Quercus lobata HOM05D003876 ORTHO05D004560 9.5e-11 72.8 91 46.2
QL10p036392 Quercus lobata HOM05D003876 ORTHO05D004560 1.1e-09 69.3 91 45.1
QL08p010925 Quercus lobata HOM05D003876 ORTHO05D004560 4.0e-09 67.4 106 43.4
QL08p011039 Quercus lobata HOM05D003876 ORTHO05D004560 6.8e-09 66.6 91 45.1
QL08p010874 Quercus lobata HOM05D003876 ORTHO05D004560 3.4e-08 64.3 51 66.7
Phvul.006G043300 Phaseolus vulgaris HOM05D003876 ORTHO05D004560 5.8e-08 63.5 77 42.9
QL08p010959 Quercus lobata HOM05D003876 ORTHO05D004560 2.9e-07 61.2 92 45.7
QL08p010650 Quercus lobata HOM05D003876 ORTHO05D004560 8.4e-07 59.7 51 58.8
QL10p036338 Quercus lobata HOM05D003876 ORTHO05D004560 8.4e-07 59.7 51 58.8


User provided reference genes

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