Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3g0018542 Lotus japonicus HOM05D003406 ORTHO05D004026 1.1e-301 1039.6 708 100.0
Ca_23943_v3 Cicer arietinum L. HOM05D003406 ORTHO05D004026 2.5e-165 586.6 584 84.8
Glyma.13G198200 Glycine max HOM05D003406 ORTHO05D004026 1.6e-164 583.9 577 84.7
Phvul.011G207400 Phaseolus vulgaris HOM05D003406 ORTHO05D004026 1.2e-159 567.8 577 82.8
Lalb_Chr01g0007801 Lupinus albus HOM05D003406 ORTHO05D004026 8.5e-158 561.6 585 82.2
Medtr8g038550 Medicago truncatula HOM05D003406 ORTHO05D004026 1.5e-157 560.8 585 83.1
VMungo1127G0085 Vigna mungo HOM05D003406 ORTHO05D004026 4.2e-157 559.3 611 62.2
Lalb_Chr19g0132381 Lupinus albus HOM05D003406 ORTHO05D004026 3.0e-155 553.1 587 81.1
Glyma.15G236500 Glycine max HOM05D003406 ORTHO05D004026 2.3e-142 510.4 577 81.3
CiPaw.13G012800 Carya illinoinensis HOM05D003406 ORTHO05D004026 2.0e-130 470.7 604 76.0
TPR.G36971 Trifolium pratense HOM05D003406 ORTHO05D004026 4.4e-130 469.5 398 65.6
QL04p014603 Quercus lobata HOM05D003406 ORTHO05D004026 2.4e-128 463.8 597 76.0
arahy.Tifrunner.gnm1.ann1.07MYST Arachis hypogaea HOM05D003406 ORTHO05D004026 2.7e-127 460.3 585 68.4
Psat4g192120 Pisum sativum HOM05D003406 ORTHO05D004026 2.7e-127 460.3 484 86.2
QL04p014965 Quercus lobata HOM05D003406 ORTHO05D004026 2.7e-127 460.3 597 75.9
Gorai.011G213900 Gossypium raimondii HOM05D003406 ORTHO05D004026 1.0e-126 458.4 597 75.7
Haze_03074 Corylus avellana HOM05D003406 ORTHO05D004026 1.3e-126 458.0 585 76.8
Gohir.A10G183800 Gossypium hirsutum HOM05D003406 ORTHO05D004026 3.0e-126 456.8 597 76.4
arahy.Tifrunner.gnm1.ann1.P8HZNX Arachis hypogaea HOM05D003406 ORTHO05D004026 5.0e-126 456.1 593 75.9
Duzib106G0689 Durio zibethinus HOM05D003406 ORTHO05D004026 5.0e-126 456.1 591 75.3
Gohir.D10G190800 Gossypium hirsutum HOM05D003406 ORTHO05D004026 1.1e-123 448.4 597 75.2
Lj7A583T43 Lonicera japonica HOM05D003406 ORTHO05D004026 1.1e-123 448.4 573 77.0
Thecc.10G162300 Theobroma cacao HOM05D003406 ORTHO05D004026 1.8e-123 447.6 591 74.8
Manes.04G160100 Manihot esculenta HOM05D003406 ORTHO05D004026 2.3e-123 447.2 573 76.4
CANSAT25G0328 Cannabis sativa HOM05D003406 ORTHO05D004026 3.4e-122 443.4 579 76.3
Cfa010885 Carpinus fangiana HOM05D003406 ORTHO05D004026 3.4e-122 443.4 592 75.0
Potri.003G197900 Populus trichocarpa HOM05D003406 ORTHO05D004026 3.2e-120 436.8 588 74.7
Dinv32032 Davidia involucrata HOM05D003406 ORTHO05D004026 1.2e-119 434.9 612 73.2
ClCG01G007460 Citrullus lanatus HOM05D003406 ORTHO05D004026 7.8e-119 432.2 626 60.9
Dinv09276 Davidia involucrata HOM05D003406 ORTHO05D004026 7.8e-119 432.2 608 52.8
TWI63G0701 Tripterygium wilfordii HOM05D003406 ORTHO05D004026 1.3e-118 431.4 584 74.7
Duzib114G0281 Durio zibethinus HOM05D003406 ORTHO05D004026 3.0e-118 430.3 583 67.8
MELO3C005161.2 Cucumis melo HOM05D003406 ORTHO05D004026 7.3e-117 425.6 597 72.7
MD07G1038200 Malus domestica HOM05D003406 ORTHO05D004026 7.3e-117 425.6 598 74.7
CsaV3_5G024420 Cucumis sativus L. HOM05D003406 ORTHO05D004026 9.5e-117 425.2 600 73.0
Actinidia06245 Actinidia chinensis HOM05D003406 ORTHO05D004026 1.2e-116 424.9 710 65.1
Potri.T125206 Populus trichocarpa HOM05D003406 ORTHO05D004026 1.8e-115 421.0 583 73.9
Ciclev10004445m.g Citrus clementina HOM05D003406 ORTHO05D004026 6.8e-115 419.1 596 73.2
Prupe.2G034300 Prunus persica HOM05D003406 ORTHO05D004026 2.0e-114 417.5 604 71.9
FvH4_7g02880 Fragaria vesca HOM05D003406 ORTHO05D004026 4.4e-114 416.4 572 75.0
Hund13347 Selenicereus undatus HOM05D003406 ORTHO05D004026 2.2e-113 414.1 579 74.4
Atru.chr12.1360 Acer truncatum HOM05D003406 ORTHO05D004026 1.9e-112 411.0 595 72.3
FAN03G3378 Fragaria x ananassa HOM05D003406 ORTHO05D004026 9.2e-112 408.7 572 74.1
GSVIVG01013527001 Vitis vinifera HOM05D003406 ORTHO05D004026 1.6e-111 407.9 594 73.6
RcHm_v2.0_Chr1g0323831 Rosa chinensis HOM05D003406 ORTHO05D004026 1.0e-110 405.2 572 74.7
CiPaw.14G007200 Carya illinoinensis HOM05D003406 ORTHO05D004026 2.3e-110 404.1 589 73.2
Potri.001G026800 Populus trichocarpa HOM05D003406 ORTHO05D004026 5.1e-110 402.9 587 72.9
MD02G1288700 Malus domestica HOM05D003406 ORTHO05D004026 6.6e-110 402.5 631 61.0
Sed0018149 Sechium edule HOM05D003406 ORTHO05D004026 1.9e-109 401.0 596 72.5
FAN06G4607 Fragaria x ananassa HOM05D003406 ORTHO05D004026 4.3e-109 399.8 621 56.0
Manes.11G004700 Manihot esculenta HOM05D003406 ORTHO05D004026 9.6e-109 398.7 590 73.4
Eucgr.G03238 Eucalyptus grandis HOM05D003406 ORTHO05D004026 2.1e-108 397.5 584 74.3
Cc00_g06910 Coffea canephora HOM05D003406 ORTHO05D004026 1.1e-107 395.2 608 70.9
Aqoxy4G02704 Aquilegia oxysepala HOM05D003406 ORTHO05D004026 1.5e-106 391.3 584 70.5
Sabra01G0019600 Salix brachista HOM05D003406 ORTHO05D004026 2.2e-105 387.5 339 64.3
TAR369G0157 Trochodendron aralioides HOM05D003406 ORTHO05D004026 4.6e-103 379.8 582 70.4
THA.LOC104826724 Tarenaya hassleriana HOM05D003406 ORTHO05D004026 6.6e-102 375.9 580 71.4
Nn7g36639 Nelumbo nucifera HOM05D003406 ORTHO05D004026 1.9e-101 374.4 682 63.0
Sc14g0005750 Simmondsia chinensis HOM05D003406 ORTHO05D004026 2.5e-101 374.0 614 68.1
EL10Ac2g02817 Beta vulgaris HOM05D003406 ORTHO05D004026 3.3e-101 373.6 587 71.4
PGR031G1802 Punica granatum HOM05D003406 ORTHO05D004026 2.8e-100 370.5 620 70.0
MSTRG.16987 Avicennia marina HOM05D003406 ORTHO05D004026 3.4e-98 363.6 643 66.9
Actinidia10165 Actinidia chinensis HOM05D003406 ORTHO05D004026 2.2e-97 360.9 593 43.3
ECA248G2072 Erigeron canadensis HOM05D003406 ORTHO05D004026 1.9e-96 357.8 602 68.6
CSS0014544 Camellia sinensis var. sinensis HOM05D003406 ORTHO05D004026 1.2e-95 355.1 608 68.1
PSO561G0002 Papaver somniferum HOM05D003406 ORTHO05D004026 6.0e-95 352.8 567 71.1
Rhsim07G0066700 Rhododendron simsii HOM05D003406 ORTHO05D004026 1.1e-93 348.6 417 53.5
Nitab4.5_0001669g0120 Nicotiana tabacum HOM05D003406 ORTHO05D004026 1.6e-92 344.7 615 56.4
THA.LOC104819128 Tarenaya hassleriana HOM05D003406 ORTHO05D004026 2.8e-92 344.0 572 69.9
Peaxi162Scf00341g00714 Petunia axillaris HOM05D003406 ORTHO05D004026 4.8e-92 343.2 606 54.6
MBI02_g23406_MAGBIO Magnolia biondii HOM05D003406 ORTHO05D004026 9.0e-91 339.0 349 58.2
PSO063G0746 Papaver somniferum HOM05D003406 ORTHO05D004026 3.2e-88 330.5 565 69.7
SalBow5G0382 Salvia bowleyana HOM05D003406 ORTHO05D004026 5.5e-88 329.7 595 67.2
SalBow5G3900 Salvia bowleyana HOM05D003406 ORTHO05D004026 1.3e-86 325.1 596 67.1
AUR62026878 Chenopodium quinoa HOM05D003406 ORTHO05D004026 1.8e-86 324.7 582 68.6
Nitab4.5_0000151g0240 Nicotiana tabacum HOM05D003406 ORTHO05D004026 8.7e-86 322.4 617 55.4
vmacro13749 Vaccinium macrocarpon HOM05D003406 ORTHO05D004026 5.6e-85 319.7 345 58.8
AUR62037192 Chenopodium quinoa HOM05D003406 ORTHO05D004026 3.1e-83 313.9 339 55.2
Sabra03G0147300 Salix brachista HOM05D003406 ORTHO05D004026 3.4e-82 310.5 606 67.2
Zm00001eb140970 Zea mays HOM05D003406 ORTHO05D004026 1.4e-80 305.1 593 64.6
BcaB01g05356 Brassica carinata HOM05D003406 ORTHO05D004026 4.2e-80 303.5 571 66.9
HPP92_025009 Vanilla planifolia HOM05D003406 ORTHO05D004026 4.2e-80 303.5 568 66.0
AUR62037187 Chenopodium quinoa HOM05D003406 ORTHO05D004026 1.6e-79 301.6 347 54.5
SHI03990 Sapria himalayana HOM05D003406 ORTHO05D004026 3.5e-79 300.4 352 51.1
Migut.B01223 Erythranthe guttata HOM05D003406 ORTHO05D004026 3.9e-78 297.0 594 65.0
ATR0745G072 Amborella trichopoda HOM05D003406 ORTHO05D004026 4.3e-77 293.5 582 66.3
Sopen08g020990 Solanum pennellii HOM05D003406 ORTHO05D004026 2.8e-76 290.8 600 64.8
CDE04G3459 Ceratophyllum demersum HOM05D003406 ORTHO05D004026 4.8e-76 290.0 343 51.9
Lsat_1_v5_gn_1_115021 Lactuca sativa HOM05D003406 ORTHO05D004026 8.2e-76 289.3 591 64.1
Solyc08g067040.4 Solanum lycopersicum HOM05D003406 ORTHO05D004026 1.1e-75 288.9 601 64.6
BraA03t09938Z Brassica rapa HOM05D003406 ORTHO05D004026 2.6e-74 284.3 576 65.6
A03p06010 Brassica napus HOM05D003406 ORTHO05D004026 1.3e-73 282.0 576 65.8
HanXRQChr01g0004511 Helianthus annuus HOM05D003406 ORTHO05D004026 5.0e-73 280.0 576 66.0
BolC3t13203H Brassica oleracea HOM05D003406 ORTHO05D004026 2.5e-72 277.7 579 53.2
HanXRQChr15g0463071 Helianthus annuus HOM05D003406 ORTHO05D004026 2.5e-72 277.7 576 66.1
C03p07050 Brassica napus HOM05D003406 ORTHO05D004026 4.2e-72 276.9 576 64.9
SGA_v2.0_scaffold124G33625 Striga asiatica HOM05D003406 ORTHO05D004026 2.3e-70 271.2 432 63.9
Carub.0006s1164 Capsella rubella HOM05D003406 ORTHO05D004026 3.0e-70 270.8 576 65.1
Sp6g30540 Schrenkiella parvula HOM05D003406 ORTHO05D004026 3.0e-70 270.8 693 57.0
AT5G13480 Arabidopsis thaliana HOM05D003406 ORTHO05D004026 8.7e-70 269.2 547 67.8
AL6G24100 Arabidopsis lyrata HOM05D003406 ORTHO05D004026 9.1e-67 259.2 568 65.3
CARHR199960 Cardamine hirsuta HOM05D003406 ORTHO05D004026 2.6e-66 257.7 350 49.1
A02p01970 Brassica napus HOM05D003406 ORTHO05D004026 5.9e-66 256.5 580 64.0
Thhalv10012890m.g Eutrema salsugineum HOM05D003406 ORTHO05D004026 2.2e-65 254.6 746 54.4
Aa31LG11G7380 Aethionema arabicum HOM05D003406 ORTHO05D004026 3.8e-65 253.8 592 62.5
BcaNung01887 Brassica carinata HOM05D003406 ORTHO05D004026 5.5e-64 250.0 580 63.8
BraA02t05170Z Brassica rapa HOM05D003406 ORTHO05D004026 3.6e-63 247.3 580 63.8
BcaNung01149 Brassica carinata HOM05D003406 ORTHO05D004026 7.4e-61 239.6 576 63.5
BolC2t06560H Brassica oleracea HOM05D003406 ORTHO05D004026 9.7e-61 239.2 576 63.4
DCAR_031833 Daucus carota HOM05D003406 ORTHO05D004026 4.1e-59 233.8 281 55.5
C02p06160 Brassica napus HOM05D003406 ORTHO05D004026 5.9e-58 229.9 520 66.5
PSO782G3285 Papaver somniferum HOM05D003406 ORTHO05D004026 9.7e-53 212.6 494 53.2
Aqoxy2G01593 Aquilegia oxysepala HOM05D003406 ORTHO05D004026 7.2e-48 196.4 374 35.8
SMO353G0072 Selaginella moellendorffii HOM05D003406 ORTHO05D004026 1.7e-41 175.3 341 80.9
unitig_26.g9605 Utricularia gibba HOM05D003406 ORTHO05D004026 1.5e-40 172.2 105 72.4
Mapoly0029s0111 Marchantia polymorpha HOM05D003406 ORTHO05D004026 1.6e-39 168.7 539 61.0
ATR0568G096 Amborella trichopoda HOM05D003406 ORTHO05D004026 1.8e-38 165.2 305 40.3
RcHm_v2.0_Chr5g0010661 Rosa chinensis HOM05D003406 ORTHO05D004026 5.2e-38 163.7 378 74.1
CBR_g22487 Chara braunii HOM05D003406 ORTHO05D004026 8.3e-36 156.4 537 57.7
FAN28G2604 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.8e-35 155.2 346 79.2
AagrBONN_evm.TU.Sc2ySwM_369.461 Anthoceros agrestis HOM05D003406 ORTHO05D004026 2.4e-35 154.8 394 42.1
CBR_g16799 Chara braunii HOM05D003406 ORTHO05D004026 1.2e-34 152.5 582 55.7
FAN26G1924 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.2e-34 152.5 344 72.7
FAN19G0629 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.5e-34 151.0 463 63.9
PSO561G0005 Papaver somniferum HOM05D003406 ORTHO05D004026 1.9e-32 145.2 200 53.0
PGSC0003DMG400023151 Solanum tuberosum HOM05D003406 ORTHO05D004026 1.2e-31 142.5 275 44.4
Hma1.2p1_1396F.1_g280640 Hydrangea macrophylla HOM05D003406 ORTHO05D004026 2.8e-31 141.4 291 69.1
PSO782G3453 Papaver somniferum HOM05D003406 ORTHO05D004026 3.6e-31 141.0 271 42.1
Pp3c16_16500 Physcomitrium patens HOM05D003406 ORTHO05D004026 1.0e-30 139.4 537 56.8
FAN23G2061 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.4e-30 139.0 131 55.0
RcHm_v2.0_Chr3g0482981 Rosa chinensis HOM05D003406 ORTHO05D004026 2.6e-29 134.8 352 74.4
RcHm_v2.0_Chr3g0482821 Rosa chinensis HOM05D003406 ORTHO05D004026 7.5e-29 133.3 352 74.1
RcHm_v2.0_Chr3g0486211 Rosa chinensis HOM05D003406 ORTHO05D004026 1.8e-27 128.6 135 50.4
RcHm_v2.0_Chr4g0404661 Rosa chinensis HOM05D003406 ORTHO05D004026 1.2e-26 125.9 110 56.4
Actinidia10171 Actinidia chinensis HOM05D003406 ORTHO05D004026 2.7e-26 124.8 122 62.3
FvH4_6g22190 Fragaria vesca HOM05D003406 ORTHO05D004026 5.9e-26 123.6 137 46.7
FAN09G0535 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.0e-25 122.9 134 50.0
FAN13G0969 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.7e-25 122.1 132 46.2
FAN14G5538 Fragaria x ananassa HOM05D003406 ORTHO05D004026 2.9e-25 121.3 137 46.0
Actinidia13019 Actinidia chinensis HOM05D003406 ORTHO05D004026 8.6e-25 119.8 172 52.9
FAN18G4486 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.5e-24 119.0 133 45.9
SEGI_30282 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 1.9e-24 118.6 89 59.6
FvH4_5g25490 Fragaria vesca HOM05D003406 ORTHO05D004026 7.3e-24 116.7 133 45.1
FvH4_5g25550 Fragaria vesca HOM05D003406 ORTHO05D004026 7.3e-24 116.7 133 45.1
TPR.G36904 Trifolium pratense HOM05D003406 ORTHO05D004026 7.3e-24 116.7 72 76.4
SMO231G0014 Selaginella moellendorffii HOM05D003406 ORTHO05D004026 9.5e-24 116.3 108 54.6
TPR.G24634 Trifolium pratense HOM05D003406 ORTHO05D004026 6.1e-23 113.6 72 75.0
Haze_26561 Corylus avellana HOM05D003406 ORTHO05D004026 1.0e-22 112.8 290 37.6
SEGI_35311 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 1.4e-22 112.5 352 35.8
Actinidia19465 Actinidia chinensis HOM05D003406 ORTHO05D004026 1.2e-21 109.4 237 44.3
MCO04G412 Micromonas commoda HOM05D003406 ORTHO05D004026 2.9e-20 104.8 288 47.2
PRCOL_00004312 Prasinoderma coloniale HOM05D003406 ORTHO05D004026 8.3e-20 103.2 298 48.3
arahy.Tifrunner.gnm1.ann1.JYS69T Arachis hypogaea HOM05D003406 ORTHO05D004026 2.4e-19 101.7 106 60.4
SEGI_28183 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 2.7e-18 98.2 350 34.6
Ah.10g030390 Amaranthus hybridus HOM05D003406 ORTHO05D004026 3.5e-18 97.8 85 57.6
SHI03989 Sapria himalayana HOM05D003406 ORTHO05D004026 4.6e-18 97.4 72 59.7
SEGI_34701 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 1.0e-17 96.3 53 71.7
DCAR_031832 Daucus carota HOM05D003406 ORTHO05D004026 1.2e-15 89.4 63 69.8
Cre06.g251951 Chlamydomonas reinhardtii HOM05D003406 ORTHO05D004026 3.6e-15 87.8 79 46.8
SEGI_13935 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 1.1e-14 86.3 41 92.7
FAN06G0645 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.4e-13 81.3 54 63.0
FAN09G3514 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.4e-13 81.3 54 63.0
FAN11G1841 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.4e-13 81.3 54 63.0
FAN16G0070 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.4e-13 81.3 54 63.0
FAN16G0123 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.4e-13 81.3 54 63.0
FAN23G2758 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.4e-13 81.3 54 63.0
FAN27G1752 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.4e-13 81.3 54 63.0
Hma1.2p1_1396F.1_g280660 Hydrangea macrophylla HOM05D003406 ORTHO05D004026 4.4e-13 80.9 94 55.3
Aqoxy2G01592 Aquilegia oxysepala HOM05D003406 ORTHO05D004026 7.5e-13 80.1 121 44.6
FAN19G1643 Fragaria x ananassa HOM05D003406 ORTHO05D004026 7.5e-13 80.1 54 61.1
FAN11G4032 Fragaria x ananassa HOM05D003406 ORTHO05D004026 5.0e-09 67.4 94 42.6
FAN14G3483 Fragaria x ananassa HOM05D003406 ORTHO05D004026 6.6e-09 67.0 83 49.4
FAN19G2649 Fragaria x ananassa HOM05D003406 ORTHO05D004026 7.3e-08 63.5 38 68.4
Aa31LG8G12390 Aethionema arabicum HOM05D003406 ORTHO05D030983 1.2e-07 62.8 68 44.1


User provided reference genes

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