Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P718T48 Lonicera japonica HOM05D063616 ORTHO05D000022 6.7e-122 440.7 215 100.0
Lj2P663T6 Lonicera japonica HOM05D000155 ORTHO05D000022 1.7e-32 143.7 204 37.3
Lj1C578T12 Lonicera japonica HOM05D001950 ORTHO05D048434 1.1e-31 141.0 167 53.9
Lj7P241T13 Lonicera japonica HOM05D000155 ORTHO05D000022 1.7e-29 133.7 204 36.8
Lj3P749T41 Lonicera japonica HOM05D063616 ORTHO05D048434 1.5e-20 104.0 81 71.6
Lj7P711T40 Lonicera japonica HOM05D000155 ORTHO05D000022 5.3e-18 95.5 132 33.3
Lj9P673T29 Lonicera japonica HOM05D000155 ORTHO05D000022 2.0e-17 93.6 166 27.7
Sopen04g014310 Solanum pennellii HOM05D000155 ORTHO05D000022 5.4e-15 85.5 129 31.8
Lju1058C1G0 Lonicera japonica HOM05D000155 ORTHO05D000022 2.7e-14 83.2 114 43.0
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 3.0e-13 79.7 126 33.3
Cc00_g15230 Coffea canephora HOM05D000155 ORTHO05D000022 6.7e-13 78.6 161 31.1
Cc00_g21050 Coffea canephora HOM05D000155 ORTHO05D000022 6.7e-13 78.6 161 31.1
Cc00_g24940 Coffea canephora HOM05D000155 ORTHO05D000022 6.7e-13 78.6 161 31.1
Cc06_g22510 Coffea canephora HOM05D000155 ORTHO05D000022 6.7e-13 78.6 161 31.1
Lj9P617T39 Lonicera japonica HOM05D000155 ORTHO05D000022 6.7e-13 78.6 123 33.3
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 8.7e-13 78.2 129 31.8
Lj6P673T55 Lonicera japonica HOM05D000155 ORTHO05D000022 2.5e-12 76.6 108 36.1
MBI13_g21845_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 4.3e-12 75.9 131 33.6
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 4.3e-12 75.9 157 26.8
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 4.3e-12 75.9 157 26.8
Peaxi162Scf00056g00119 Petunia axillaris HOM05D001426 ORTHO05D001389 7.4e-12 75.1 135 30.4
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 7.4e-12 75.1 159 27.0
Nitab4.5_0000249g0360 Nicotiana tabacum HOM05D009916 ORTHO05D000022 1.3e-11 74.3 158 29.1
PGSC0003DMG400010787 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.6e-11 73.9 129 34.9
Cc03_g15170 Coffea canephora HOM05D000025 ORTHO05D000022 2.1e-11 73.6 164 29.3
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 3.6e-11 72.8 131 29.0
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 3.6e-11 72.8 131 29.0
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 6.2e-11 72.0 129 28.7
PGSC0003DMG400021434 Solanum tuberosum HOM05D001426 ORTHO05D000022 1.1e-10 71.2 127 28.3
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 1.4e-10 70.9 122 31.1
MBI07_g36524_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.8e-10 70.5 94 35.1
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.8e-10 70.5 157 26.8
MBI17_g43006_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 2.4e-10 70.1 132 31.1
Peaxi162Scf00257g00218 Petunia axillaris HOM05D001426 ORTHO05D001389 2.4e-10 70.1 152 28.9
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 3.1e-10 69.7 129 28.7
CiPaw.04G137600 Carya illinoinensis HOM05D000155 ORTHO05D000022 4.0e-10 69.3 134 28.4
MBI04_g33813_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.0e-10 69.3 123 31.7
MBI13_g30119_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.0e-10 69.3 131 31.3
MBI16_g05929_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.0e-10 68.2 177 26.6
PGSC0003DMG401009742 Solanum tuberosum HOM05D001426 ORTHO05D001389 1.5e-09 67.4 130 30.0
Peaxi162Scf00552g00012 Petunia axillaris HOM05D001426 ORTHO05D001389 2.6e-09 66.6 124 30.6
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 2.6e-09 66.6 129 28.7
PGSC0003DMG400015911 Solanum tuberosum HOM05D000003 ORTHO05D001389 5.8e-09 65.5 124 30.6
Peaxi162Scf00131g01713 Petunia axillaris HOM05D001426 ORTHO05D001389 7.6e-09 65.1 123 31.7
Peaxi162Scf00492g00016 Petunia axillaris HOM05D001426 ORTHO05D001389 7.6e-09 65.1 119 30.3
Peaxi162Scf00172g00144 Petunia axillaris HOM05D001426 ORTHO05D001389 9.9e-09 64.7 97 35.1
Aqoxy4G01484 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-08 64.3 111 31.5
MBI03_g01216_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.3e-08 64.3 172 26.7
MBI15_g35008_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.3e-08 64.3 131 26.0
MBI11_g05091_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.7e-08 63.9 129 30.2
Aqoxy5G02155 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 2.2e-08 63.5 124 29.8
Aqoxy5G03038 Aquilegia oxysepala HOM05D000003 ORTHO05D000022 2.2e-08 63.5 124 29.8
MBI19_g47804_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.9e-08 63.2 114 30.7
MBI17_g21963_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.8e-08 62.8 148 29.7
HPP92_005173 Vanilla planifolia HOM05D000003 ORTHO05D000004 4.9e-08 62.4 146 28.1
MBI18_g25446_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.4e-08 62.0 127 28.3
MBI09_g13298_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 1.1e-07 61.2 141 26.2
MBI15_g26841_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.1e-07 61.2 117 29.9
Nitab4.5_0000754g0070 Nicotiana tabacum HOM05D009916 ORTHO05D000022 1.1e-07 61.2 101 30.7
CiPaw.04G130600 Carya illinoinensis HOM05D000155 ORTHO05D000022 1.4e-07 60.8 105 33.3
Nitab4.5_0010722g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.4e-07 60.8 123 27.6
PGSC0003DMG400035792 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.4e-07 60.8 126 27.0
MBI16_g37125_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.9e-07 60.5 172 30.8
HPP92_018365 Vanilla planifolia HOM05D000155 ORTHO05D000022 1.9e-07 60.5 126 29.4
Nitab4.5_0001846g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-07 60.1 104 32.7
MBI02_g21188_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.2e-07 59.7 125 28.8
MBI12_g32348_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.2e-07 59.7 108 27.8
MBI19_g40269_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.2e-07 59.7 112 30.4
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-07 59.7 157 24.8
Lj2C463G3 Lonicera japonica HOM05D000155 ORTHO05D000022 4.2e-07 59.3 98 33.7
Lj9P496T65 Lonicera japonica HOM05D000155 ORTHO05D000022 4.2e-07 59.3 85 34.1
Peaxi162Scf00938g00016 Petunia axillaris HOM05D001426 ORTHO05D001389 4.2e-07 59.3 69 40.6
Aqoxy4G00597 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.5e-07 58.9 178 25.8
MBI04_g19011_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.5e-07 58.9 111 29.7
Atru.chr2.3295 Acer truncatum HOM05D000003 ORTHO05D000004 7.1e-07 58.5 127 31.5
RcHm_v2.0_Chr4g0439261 Rosa chinensis HOM05D000003 ORTHO05D000651 7.1e-07 58.5 163 27.6
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 7.1e-07 58.5 122 25.4
MBI19_g02315_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.3e-07 58.2 132 28.0
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-06 57.8 135 28.1
MBI13_g20638_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-06 57.4 132 28.8
MBI18_g23800_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-06 57.4 139 31.7
Peaxi162Scf00882g00015 Petunia axillaris HOM05D001426 ORTHO05D001389 1.6e-06 57.4 68 39.7
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.6e-06 57.4 123 26.0
Nitab4.5_0000597g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.7e-06 56.6 124 25.8
PGSC0003DMG400045833 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.5e-06 56.2 130 26.2
MBI08_g25833_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.6e-06 55.8 123 30.9
MBI19_g39208_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.6e-06 55.8 128 30.5
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 4.6e-06 55.8 122 25.4
MBI06_g02549_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.9e-06 55.1 136 26.5
Nitab4.5_0000031g0460 Nicotiana tabacum HOM05D009916 ORTHO05D000022 7.9e-06 55.1 96 29.2
HPP92_027425 Vanilla planifolia HOM05D000003 ORTHO05D000004 7.9e-06 55.1 195 28.2


User provided reference genes

Program Settings