Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C201G4 Lonicera japonica HOM05D000862 ORTHO05D000943 5.7e-52 207.2 98 100.0
Lj3A201T34 Lonicera japonica HOM05D000041 ORTHO05D000452 1.6e-43 179.1 96 87.5
Lj3A199G60 Lonicera japonica HOM05D000041 ORTHO05D000943 9.0e-42 173.3 90 88.9
Lj3A199G59 Lonicera japonica HOM05D000862 ORTHO05D000943 9.7e-36 153.3 97 74.2
Lj3C200T6 Lonicera japonica HOM05D000041 ORTHO05D000943 1.7e-35 152.5 97 76.3
Lj3C200G4 Lonicera japonica HOM05D000041 ORTHO05D000943 1.6e-30 136.0 93 67.7
Dinv11986 Davidia involucrata HOM05D000862 ORTHO05D000943 1.4e-29 132.9 99 59.6
Lj1A1150T112 Lonicera japonica HOM05D000862 ORTHO05D000943 3.8e-24 114.8 113 50.4
Lj3C202T5 Lonicera japonica HOM05D000862 ORTHO05D000943 2.5e-23 112.1 97 61.9
Lj1C1150G8 Lonicera japonica HOM05D000862 ORTHO05D000943 7.2e-23 110.5 100 55.0
Lj1C1150T9 Lonicera japonica HOM05D000862 ORTHO05D000943 2.3e-21 105.5 110 44.5
Eucgr.I02531 Eucalyptus grandis HOM05D000862 ORTHO05D000943 2.0e-20 102.4 87 55.2
Eucgr.I02547 Eucalyptus grandis HOM05D000862 ORTHO05D000943 2.0e-20 102.4 87 56.3
Eucgr.I02393 Eucalyptus grandis HOM05D000862 ORTHO05D000943 2.6e-20 102.1 99 51.5
Eucgr.I02558 Eucalyptus grandis HOM05D000862 ORTHO05D000943 4.4e-20 101.3 87 55.2
Lj1C1150T22 Lonicera japonica HOM05D000862 ORTHO05D000943 4.4e-20 101.3 98 50.0
PGR119G1637 Punica granatum HOM05D000862 ORTHO05D000943 5.7e-20 100.9 99 51.5
PGR119G0042 Punica granatum HOM05D000862 ORTHO05D000943 9.7e-20 100.1 99 50.5
PGR119G1341 Punica granatum HOM05D000862 ORTHO05D000943 1.7e-19 99.4 99 51.5
PGR119G2194 Punica granatum HOM05D000862 ORTHO05D000943 1.7e-19 99.4 99 51.5
Hma1.2p1_1254F.1_g270590 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 8.2e-19 97.1 96 50.0
Hma1.2p1_1397F.1_g280670 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 8.2e-19 97.1 96 50.0
Hma1.2p1_2060F.1_g312930 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 8.2e-19 97.1 96 50.0
Hma1.2p1_2138F.1_g314950 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 8.2e-19 97.1 96 50.0
Hma1.2p1_2241F.1_g317825 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 8.2e-19 97.1 96 50.0
Hma1.2p1_2241F.1_g317830 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 8.2e-19 97.1 96 50.0
Hma1.2p1_2060F.1_g312910 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.1e-18 96.7 96 50.0
Hma1.2p1_2241F.1_g317843 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.1e-18 96.7 96 50.0
Hma1.2p1_2241F.1_g317846 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.1e-18 96.7 96 50.0
Eucgr.E04097 Eucalyptus grandis HOM05D000956 ORTHO05D000943 1.8e-18 95.9 98 48.0
Hma1.2p1_2581F.1_g324740 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.8e-18 95.9 96 50.0
PGR119G1228 Punica granatum HOM05D000862 ORTHO05D000943 1.8e-18 95.9 99 48.5
PGR119G2338 Punica granatum HOM05D000862 ORTHO05D000943 1.8e-18 95.9 99 48.5
Hma1.2p1_2241F.1_g317835 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 3.1e-18 95.1 96 50.0
Hma1.2p1_0040F.1_g025100 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.6e-17 92.8 97 49.5
Eucgr.I02520 Eucalyptus grandis HOM05D000862 ORTHO05D000943 3.5e-17 91.7 90 48.9
Dinv12158 Davidia involucrata HOM05D000862 ORTHO05D000943 1.7e-16 89.4 103 45.6
Dinv12155 Davidia involucrata HOM05D000862 ORTHO05D000943 2.2e-16 89.0 103 45.6
Eucgr.I00640 Eucalyptus grandis HOM05D000862 ORTHO05D000943 2.2e-16 89.0 99 45.5
Hma1.2p1_0614F.1_g189620 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 2.2e-16 89.0 79 51.9
Hma1.2p1_1775F.1_g301900 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 6.5e-16 87.4 97 48.5
MELO3C003821.2 Cucumis melo HOM05D000862 ORTHO05D000943 8.5e-16 87.0 101 47.5
PGR142G0852 Punica granatum HOM05D000862 ORTHO05D000943 1.5e-15 86.3 80 53.8
Eucgr.F01690 Eucalyptus grandis HOM05D000862 ORTHO05D000943 3.2e-15 85.1 100 44.0
PGR119G2163 Punica granatum HOM05D000862 ORTHO05D000943 7.2e-15 84.0 79 54.4
Eucgr.G00273 Eucalyptus grandis HOM05D000862 ORTHO05D000943 9.4e-15 83.6 90 45.6
Eucgr.I00644 Eucalyptus grandis HOM05D000956 ORTHO05D000943 3.6e-14 81.6 84 46.4
Eucgr.I02524 Eucalyptus grandis HOM05D000862 ORTHO05D000943 1.4e-13 79.7 99 44.4
PGR142G3334 Punica granatum HOM05D000005 ORTHO05D000943 6.8e-13 77.4 97 45.4
RcHm_v2.0_Chr7g0225051 Rosa chinensis HOM05D000862 ORTHO05D000943 2.6e-12 75.5 106 36.8
MSTRG.24274 Avicennia marina HOM05D000862 ORTHO05D000943 3.4e-12 75.1 63 54.0
RcHm_v2.0_Chr7g0224981 Rosa chinensis HOM05D000862 ORTHO05D000943 3.4e-12 75.1 106 35.8
EL10Ac1g00597 Beta vulgaris HOM05D000862 ORTHO05D000943 4.4e-12 74.7 100 41.0
Sed0016243 Sechium edule HOM05D000862 ORTHO05D000943 7.5e-12 73.9 78 47.4
RcHm_v2.0_Chr6g0301821 Rosa chinensis HOM05D000862 ORTHO05D000943 1.3e-11 73.2 53 62.3
Dinv03894 Davidia involucrata HOM05D000862 ORTHO05D000943 1.7e-11 72.8 60 58.3
Prupe.3G053500 Prunus persica HOM05D000862 ORTHO05D000943 1.7e-11 72.8 103 35.9
BolC5t33737H Brassica oleracea HOM05D000956 ORTHO05D001930 2.2e-11 72.4 88 39.8
FAN02G2565 Fragaria x ananassa HOM05D000862 ORTHO05D000943 2.2e-11 72.4 98 40.8
FAN09G3128 Fragaria x ananassa HOM05D000862 ORTHO05D000943 2.2e-11 72.4 98 40.8
BcaB06g25751 Brassica carinata HOM05D001329 ORTHO05D002618 3.7e-11 71.6 89 39.3
BraA08t32373Z Brassica rapa HOM05D000956 ORTHO05D001930 3.7e-11 71.6 88 39.8
FAN14G2250 Fragaria x ananassa HOM05D000862 ORTHO05D000943 3.7e-11 71.6 98 39.8
Potri.005G232500 Populus trichocarpa HOM05D000862 ORTHO05D000943 3.7e-11 71.6 118 34.7
RcHm_v2.0_Chr2g0134911 Rosa chinensis HOM05D000862 ORTHO05D000943 3.7e-11 71.6 106 35.8
TWI14G0123 Tripterygium wilfordii HOM05D000862 ORTHO05D000943 4.8e-11 71.2 99 37.4
Lju99C8T14 Lonicera japonica HOM05D000862 ORTHO05D000943 6.3e-11 70.9 97 40.2
PGR142G3812 Punica granatum HOM05D000005 ORTHO05D000943 6.3e-11 70.9 102 39.2
Sed0021853 Sechium edule HOM05D000125 ORTHO05D000943 6.3e-11 70.9 111 38.7
Dinv00891 Davidia involucrata HOM05D000862 ORTHO05D000943 8.3e-11 70.5 60 56.7
Sed0007237 Sechium edule HOM05D000862 ORTHO05D000003 8.3e-11 70.5 53 64.2
Sed0022225 Sechium edule HOM05D000862 ORTHO05D000943 8.3e-11 70.5 101 40.6
Nitab4.5_0004186g0040 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.1e-10 70.1 124 33.9
QL02p008688 Quercus lobata HOM05D000862 ORTHO05D000943 1.1e-10 70.1 114 36.8
BcaB06g25745 Brassica carinata HOM05D000956 ORTHO05D001930 2.4e-10 68.9 91 39.6
BolC5t33741H Brassica oleracea HOM05D000956 ORTHO05D001930 2.4e-10 68.9 91 42.9
MELO3C003823.2 Cucumis melo HOM05D000862 ORTHO05D000943 2.4e-10 68.9 110 40.0
Hund26884 Selenicereus undatus HOM05D000862 ORTHO05D000943 2.4e-10 68.9 58 55.2
Oeu030604.1 Olea europaea HOM05D000862 ORTHO05D000943 3.1e-10 68.6 59 61.0
Sed0026682 Sechium edule HOM05D000862 ORTHO05D000943 3.1e-10 68.6 53 60.4
PSO407G0149 Papaver somniferum HOM05D000862 ORTHO05D000943 4.1e-10 68.2 54 57.4
BcaC05g28874 Brassica carinata HOM05D000956 ORTHO05D001930 5.4e-10 67.8 91 41.8
A08p03410 Brassica napus HOM05D000956 ORTHO05D001930 5.4e-10 67.8 93 37.6
C05p49840 Brassica napus HOM05D000956 ORTHO05D001930 5.4e-10 67.8 91 41.8
CANSAT54G1589 Cannabis sativa HOM05D000862 ORTHO05D000943 5.4e-10 67.8 71 43.7
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 5.4e-10 67.8 119 32.8
Eucgr.I02543 Eucalyptus grandis HOM05D000956 ORTHO05D000943 5.4e-10 67.8 80 42.5
AL1G32440 Arabidopsis lyrata HOM05D000862 ORTHO05D000943 7.0e-10 67.4 53 58.5
Gohir.A06G006900 Gossypium hirsutum HOM05D000862 ORTHO05D000943 7.0e-10 67.4 78 43.6
Aa31LG10G2810 Aethionema arabicum HOM05D000956 ORTHO05D001930 9.1e-10 67.0 94 37.2
CsaV3_3G045260 Cucumis sativus L. HOM05D000862 ORTHO05D000943 9.1e-10 67.0 110 37.3
Eucgr.G00274 Eucalyptus grandis HOM05D000862 ORTHO05D000943 9.1e-10 67.0 82 46.3
BcaC09g48609 Brassica carinata HOM05D000956 ORTHO05D001930 1.2e-09 66.6 91 41.8
C01p47830 Brassica napus HOM05D000956 ORTHO05D001930 1.2e-09 66.6 91 39.6
BolC1t04750H Brassica oleracea HOM05D000956 ORTHO05D001930 1.2e-09 66.6 91 39.6
Migut.N03117 Erythranthe guttata HOM05D000862 ORTHO05D000943 1.2e-09 66.6 56 53.6
Gorai.010G007400 Gossypium raimondii HOM05D000862 ORTHO05D000943 1.2e-09 66.6 78 42.3
Manes.18G021800 Manihot esculenta HOM05D000862 ORTHO05D000943 1.2e-09 66.6 130 34.6
Sabra02G0024100 Salix brachista HOM05D000862 ORTHO05D000943 1.2e-09 66.6 58 53.4
CARHR097330 Cardamine hirsuta HOM05D000956 ORTHO05D001930 1.6e-09 66.2 93 36.6
Dinv39464 Davidia involucrata HOM05D000862 ORTHO05D000943 1.6e-09 66.2 56 55.4
FvH4_2g39220 Fragaria vesca HOM05D000862 ORTHO05D000943 1.6e-09 66.2 53 50.9
FAN15G3373 Fragaria x ananassa HOM05D000862 ORTHO05D000943 1.6e-09 66.2 53 50.9
Manes.05G154000 Manihot esculenta HOM05D000862 ORTHO05D000943 1.6e-09 66.2 53 58.5
Rhsim06G0028200 Rhododendron simsii HOM05D000862 ORTHO05D000943 1.6e-09 66.2 57 54.4
Aa31LG10G2800 Aethionema arabicum HOM05D000956 ORTHO05D001930 2.0e-09 65.9 98 38.8
CAN.G960.44 Capsicum annuum HOM05D000862 ORTHO05D000943 2.0e-09 65.9 59 50.8
CiPaw.07G156100 Carya illinoinensis HOM05D000862 ORTHO05D000943 2.0e-09 65.9 53 60.4
Nitab4.5_0005317g0020 Nicotiana tabacum HOM05D000862 ORTHO05D000943 2.0e-09 65.9 103 34.0
PSO782G3248 Papaver somniferum HOM05D000862 ORTHO05D000943 2.0e-09 65.9 54 57.4
PSO832G2061 Papaver somniferum HOM05D000862 ORTHO05D000943 2.0e-09 65.9 54 57.4
PGR142G2724 Punica granatum HOM05D000005 ORTHO05D000943 2.0e-09 65.9 103 36.9
Sed0026289 Sechium edule HOM05D000125 ORTHO05D000120 2.0e-09 65.9 60 60.0
GSVIVG01009788001 Vitis vinifera HOM05D000862 ORTHO05D000943 2.0e-09 65.9 55 58.2
Ah.12g065440 Amaranthus hybridus HOM05D000862 ORTHO05D000943 2.7e-09 65.5 117 32.5
AT1G19715 Arabidopsis thaliana HOM05D000862 ORTHO05D000943 2.7e-09 65.5 53 56.6
Carub.0001s1926 Capsella rubella HOM05D000862 ORTHO05D000943 2.7e-09 65.5 53 58.5
CARHR042230 Cardamine hirsuta HOM05D000956 ORTHO05D001930 2.7e-09 65.5 97 38.1
TWI12G0321 Tripterygium wilfordii HOM05D000862 ORTHO05D000943 2.7e-09 65.5 124 33.1
A01p37790 Brassica napus HOM05D000956 ORTHO05D001930 3.5e-09 65.1 91 39.6
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 3.5e-09 65.1 119 33.6
Nitab4.5_0002727g0030 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.5e-09 65.1 133 30.8
PSO566G0233 Papaver somniferum HOM05D000862 ORTHO05D000943 3.5e-09 65.1 54 55.6
ClCG05G018900 Citrullus lanatus HOM05D000862 ORTHO05D000943 4.5e-09 64.7 56 53.6
Potri.002G030400 Populus trichocarpa HOM05D000862 ORTHO05D000943 4.5e-09 64.7 53 54.7
Sp1g38650 Schrenkiella parvula HOM05D000956 ORTHO05D001930 4.5e-09 64.7 98 36.7
TAR497G0010 Trochodendron aralioides HOM05D000862 ORTHO05D000943 4.5e-09 64.7 137 29.9
Actinidia22511 Actinidia chinensis HOM05D000862 ORTHO05D000943 5.9e-09 64.3 53 56.6
ATR0665G023 Amborella trichopoda HOM05D000862 ORTHO05D000943 5.9e-09 64.3 59 47.5
AL7G44850 Arabidopsis lyrata HOM05D000956 ORTHO05D001930 5.9e-09 64.3 91 39.6
C05p12990 Brassica napus HOM05D000956 ORTHO05D001930 5.9e-09 64.3 100 34.0
BolC5t30046H Brassica oleracea HOM05D000956 ORTHO05D001930 5.9e-09 64.3 100 34.0
A06p10970 Brassica napus HOM05D000956 ORTHO05D001930 7.7e-09 63.9 100 33.0
A10p13760 Brassica napus HOM05D000956 ORTHO05D001930 7.7e-09 63.9 89 34.8
C09p47970 Brassica napus HOM05D000956 ORTHO05D001930 7.7e-09 63.9 89 34.8
BraA06t24276Z Brassica rapa HOM05D000956 ORTHO05D001930 7.7e-09 63.9 100 33.0
BraA10t43470Z Brassica rapa HOM05D000956 ORTHO05D001930 7.7e-09 63.9 89 34.8
Cc01_g04380 Coffea canephora HOM05D000862 ORTHO05D000943 7.7e-09 63.9 98 35.7
Lj4A33T79 Lonicera japonica HOM05D000862 ORTHO05D000943 7.7e-09 63.9 60 51.7
BcaB02g11019 Brassica carinata HOM05D000956 ORTHO05D001930 1.0e-08 63.5 97 38.1
BolC9t57640H Brassica oleracea HOM05D000956 ORTHO05D001930 1.0e-08 63.5 85 36.5
CSS0029292 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D000943 1.0e-08 63.5 52 55.8
Thhalv10020712m.g Eutrema salsugineum HOM05D000956 ORTHO05D001930 1.0e-08 63.5 91 39.6
SEGI_03652 Sequoiadendron giganteum HOM05D000862 ORTHO05D000943 1.0e-08 63.5 134 29.1
SEGI_31161 Sequoiadendron giganteum HOM05D000862 ORTHO05D000943 1.0e-08 63.5 134 29.1
vmacro21687 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 1.0e-08 63.5 53 56.6
vmacro23427 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 1.0e-08 63.5 53 56.6
arahy.Tifrunner.gnm1.ann1.8VYI8C Arachis hypogaea HOM05D000862 ORTHO05D000943 1.3e-08 63.2 55 61.8
arahy.Tifrunner.gnm1.ann1.VI7NX3 Arachis hypogaea HOM05D000862 ORTHO05D000943 1.3e-08 63.2 55 61.8
BcaB02g08478 Brassica carinata HOM05D000956 ORTHO05D001930 1.3e-08 63.2 96 36.5
THA.LOC104810623 Tarenaya hassleriana HOM05D000956 ORTHO05D001930 1.3e-08 63.2 90 38.9
BcaB03g12902 Brassica carinata HOM05D000862 ORTHO05D000943 1.7e-08 62.8 57 47.4
BcaB04g20592 Brassica carinata HOM05D000956 ORTHO05D001930 1.7e-08 62.8 98 33.7
A06p15840 Brassica napus HOM05D000862 ORTHO05D000943 1.7e-08 62.8 53 54.7
BraA06t24694Z Brassica rapa HOM05D000862 ORTHO05D000943 1.7e-08 62.8 53 54.7
Sabra05G0179200 Salix brachista HOM05D000862 ORTHO05D000943 1.7e-08 62.8 130 33.8
AL3G35460 Arabidopsis lyrata HOM05D000956 ORTHO05D001930 2.2e-08 62.4 86 38.4
AT1G57570 Arabidopsis thaliana HOM05D000956 ORTHO05D001930 2.2e-08 62.4 87 41.4
Medtr3g464370 Medicago truncatula HOM05D000862 ORTHO05D000943 2.2e-08 62.4 56 51.8
Nitab4.5_0006269g0010 Nicotiana tabacum HOM05D000862 ORTHO05D000943 2.2e-08 62.4 53 52.8
Peaxi162Scf00417g01331 Petunia axillaris HOM05D000862 ORTHO05D000943 2.2e-08 62.4 131 31.3
Carub.0007s3172 Capsella rubella HOM05D000956 ORTHO05D001930 2.9e-08 62.0 95 38.9
CARHR052800 Cardamine hirsuta HOM05D000956 ORTHO05D001930 2.9e-08 62.0 95 40.0
Medtr5g071200 Medicago truncatula HOM05D000862 ORTHO05D000943 2.9e-08 62.0 56 53.6
Nn5g29733 Nelumbo nucifera HOM05D000862 ORTHO05D000943 2.9e-08 62.0 124 33.9
THA.LOC104817954 Tarenaya hassleriana HOM05D000956 ORTHO05D003111 2.9e-08 62.0 97 36.1
Atru.chr13.392 Acer truncatum HOM05D000862 ORTHO05D000943 3.8e-08 61.6 56 50.0
Aa31LG4G5670 Aethionema arabicum HOM05D000862 ORTHO05D000943 3.8e-08 61.6 53 54.7
EL10Ac1g00596 Beta vulgaris HOM05D000862 ORTHO05D000943 3.8e-08 61.6 143 30.1
BcaB03g11862 Brassica carinata HOM05D000956 ORTHO05D001930 3.8e-08 61.6 85 34.1
BcaB04g17173 Brassica carinata HOM05D000956 ORTHO05D001930 3.8e-08 61.6 95 31.6
BcaC05g25425 Brassica carinata HOM05D000956 ORTHO05D001930 3.8e-08 61.6 95 34.7
Ciclev10003362m.g Citrus clementina HOM05D000862 ORTHO05D000943 3.8e-08 61.6 64 48.4
DCAR_009958 Daucus carota HOM05D000862 ORTHO05D000943 3.8e-08 61.6 52 57.7
Glyma.18G061800 Glycine max HOM05D000862 ORTHO05D000943 3.8e-08 61.6 48 60.4
Lj6g0003682 Lotus japonicus HOM05D000862 ORTHO05D000943 3.8e-08 61.6 49 61.2
Psat2g057640 Pisum sativum HOM05D000862 ORTHO05D000943 3.8e-08 61.6 56 51.8
Aa31sc476G10 Aethionema arabicum HOM05D000956 ORTHO05D001930 5.0e-08 61.2 79 38.0
BcaC09g49073 Brassica carinata HOM05D000956 ORTHO05D001930 5.0e-08 61.2 101 32.7
C01p42890 Brassica napus HOM05D000956 ORTHO05D001930 5.0e-08 61.2 101 32.7
C05p18160 Brassica napus HOM05D000862 ORTHO05D000003 5.0e-08 61.2 53 52.8
BolC5t30523H Brassica oleracea HOM05D000862 ORTHO05D000003 5.0e-08 61.2 53 52.8
CsaV3_3G045240 Cucumis sativus L. HOM05D000862 ORTHO05D000943 5.0e-08 61.2 56 53.6
Thhalv10007145m.g Eutrema salsugineum HOM05D000862 ORTHO05D000943 5.0e-08 61.2 53 50.9
Thhalv10020232m.g Eutrema salsugineum HOM05D000956 ORTHO05D001930 5.0e-08 61.2 91 38.5
Lj3A202T44 Lonicera japonica HOM05D000862 ORTHO05D000943 5.0e-08 61.2 35 80.0
MD15G1021200 Malus domestica HOM05D000862 ORTHO05D000943 5.0e-08 61.2 54 55.6
THA.LOC104809315 Tarenaya hassleriana HOM05D000862 ORTHO05D000943 5.0e-08 61.2 53 54.7
TPR.G15181 Trifolium pratense HOM05D000862 ORTHO05D000943 5.0e-08 61.2 56 50.0
Aa31LG8G8090 Aethionema arabicum HOM05D000956 ORTHO05D001930 6.5e-08 60.8 91 35.2
AL7G30860 Arabidopsis lyrata HOM05D000956 ORTHO05D001930 6.5e-08 60.8 91 39.6
BcaC01g01299 Brassica carinata HOM05D000956 ORTHO05D001930 6.5e-08 60.8 70 37.1
A08p02460 Brassica napus HOM05D000956 ORTHO05D001930 6.5e-08 60.8 70 37.1
C03p90380 Brassica napus HOM05D000956 ORTHO05D001930 6.5e-08 60.8 70 37.1
BolC3t21358H Brassica oleracea HOM05D000956 ORTHO05D001930 6.5e-08 60.8 70 37.1
BraA08t32285Z Brassica rapa HOM05D000956 ORTHO05D001930 6.5e-08 60.8 70 37.1
CARHR043930 Cardamine hirsuta HOM05D000956 ORTHO05D001930 6.5e-08 60.8 84 35.7
Glyma.11G173800 Glycine max HOM05D000862 ORTHO05D000943 6.5e-08 60.8 48 56.2
Os11g0524900 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 6.5e-08 60.8 83 37.3
THA.LOC104817951 Tarenaya hassleriana HOM05D000956 ORTHO05D001930 6.5e-08 60.8 93 35.5
Ah.05g180910 Amaranthus hybridus HOM05D000862 ORTHO05D000943 8.5e-08 60.5 53 50.9
AT3G21380 Arabidopsis thaliana HOM05D000956 ORTHO05D001930 8.5e-08 60.5 93 34.4
BraA01t03470Z Brassica rapa HOM05D000956 ORTHO05D001930 8.5e-08 60.5 101 32.7
CARHR091670 Cardamine hirsuta HOM05D000956 ORTHO05D001930 8.5e-08 60.5 91 37.4
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 8.5e-08 60.5 71 42.3
ECA232G0115 Erigeron canadensis HOM05D000862 ORTHO05D000943 8.5e-08 60.5 105 34.3
MD08G1023700 Malus domestica HOM05D000862 ORTHO05D000943 8.5e-08 60.5 54 53.7
Nitab4.5_0000029g0100 Nicotiana tabacum HOM05D000862 ORTHO05D000943 8.5e-08 60.5 53 50.9
Sp1g17550 Schrenkiella parvula HOM05D000862 ORTHO05D000943 8.5e-08 60.5 53 52.8
Sp3g14790 Schrenkiella parvula HOM05D000956 ORTHO05D001930 8.5e-08 60.5 91 31.9
Sed0002204 Sechium edule HOM05D000862 ORTHO05D000943 8.5e-08 60.5 53 58.5
Sed0022184 Sechium edule HOM05D000862 ORTHO05D000943 8.5e-08 60.5 54 50.0
VMungo0540G1698 Vigna mungo HOM05D000862 ORTHO05D000943 8.5e-08 60.5 48 58.3
Atru.chr1.3869 Acer truncatum HOM05D000862 ORTHO05D000943 1.1e-07 60.1 103 34.0
AT1G60110 Arabidopsis thaliana HOM05D000956 ORTHO05D001930 1.1e-07 60.1 92 39.1
BcaB02g10746 Brassica carinata HOM05D000956 ORTHO05D001930 1.1e-07 60.1 93 35.5
BcaB07g31985 Brassica carinata HOM05D000862 ORTHO05D000943 1.1e-07 60.1 53 52.8
A08p02400 Brassica napus HOM05D000956 ORTHO05D003111 1.1e-07 60.1 95 29.5
Carub.0003s1619 Capsella rubella HOM05D000956 ORTHO05D001930 1.1e-07 60.1 92 34.8
CDE05G1578 Ceratophyllum demersum HOM05D000862 ORTHO05D000943 1.1e-07 60.1 62 51.6
AT1G60095 Arabidopsis thaliana HOM05D000956 ORTHO05D001930 1.5e-07 59.7 87 40.2
BcaC04g20094 Brassica carinata HOM05D003421 ORTHO05D003268 1.5e-07 59.7 70 38.6
CDE05G1408 Ceratophyllum demersum HOM05D000862 ORTHO05D000943 1.5e-07 59.7 62 51.6
Hma1.2p1_2356F.1_g320550 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.5e-07 59.7 56 48.2
CANSAT54G1753 Cannabis sativa HOM05D000862 ORTHO05D000943 1.9e-07 59.3 73 41.1
Ca_05614_v3 Cicer arietinum L. HOM05D000862 ORTHO05D000003 1.9e-07 59.3 56 51.8
Hma1.2p1_0076F.1_g039440 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.9e-07 59.3 60 48.3
Rhsim06G0033000 Rhododendron simsii HOM05D000862 ORTHO05D000943 1.9e-07 59.3 113 30.1
SalBow8G4155 Salvia bowleyana HOM05D000862 ORTHO05D000943 1.9e-07 59.3 56 48.2
SalBow8G4313 Salvia bowleyana HOM05D000862 ORTHO05D000943 1.9e-07 59.3 56 48.2
Sed0007324 Sechium edule HOM05D000862 ORTHO05D000943 1.9e-07 59.3 53 58.5
Sed0009446 Sechium edule HOM05D000862 ORTHO05D000943 1.9e-07 59.3 53 56.6
Sed0022972 Sechium edule HOM05D000862 ORTHO05D000943 1.9e-07 59.3 53 56.6
THA.LOC104810624 Tarenaya hassleriana HOM05D000956 ORTHO05D001930 1.9e-07 59.3 100 36.0
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 2.5e-07 58.9 106 36.8
Aqoxy1G03033 Aquilegia oxysepala HOM05D000862 ORTHO05D000943 2.5e-07 58.9 121 31.4
A08p29700 Brassica napus HOM05D000862 ORTHO05D000943 2.5e-07 58.9 53 49.1
C08p19700 Brassica napus HOM05D000862 ORTHO05D000943 2.5e-07 58.9 53 49.1
BolC8t49606H Brassica oleracea HOM05D000862 ORTHO05D000943 2.5e-07 58.9 53 49.1
BraA08t34905Z Brassica rapa HOM05D000862 ORTHO05D000943 2.5e-07 58.9 53 49.1
CARHR215630 Cardamine hirsuta HOM05D000956 ORTHO05D001930 2.5e-07 58.9 90 33.3
PSO210G4227 Papaver somniferum HOM05D000862 ORTHO05D000943 2.5e-07 58.9 52 57.7
PSO210G7120 Papaver somniferum HOM05D000862 ORTHO05D000943 2.5e-07 58.9 52 57.7
Phvul.006G068800 Phaseolus vulgaris HOM05D000862 ORTHO05D000943 2.5e-07 58.9 48 56.2
Sp1g38640 Schrenkiella parvula HOM05D000956 ORTHO05D001930 2.5e-07 58.9 71 36.6
Sed0001036 Sechium edule HOM05D000862 ORTHO05D000943 2.5e-07 58.9 51 60.8
Sed0021473 Sechium edule HOM05D000862 ORTHO05D000943 2.5e-07 58.9 55 52.7
Cpa.g.c31450.2 Carica papaya HOM05D000862 ORTHO05D000943 3.2e-07 58.5 52 53.8
Thhalv10022115m.g Eutrema salsugineum HOM05D000956 ORTHO05D001930 3.2e-07 58.5 94 33.0
HanXRQChr09g0275571 Helianthus annuus HOM05D000862 ORTHO05D000943 3.2e-07 58.5 60 48.3
Lju114A8G16 Lonicera japonica HOM05D000862 ORTHO05D000943 3.2e-07 58.5 98 32.7
Nitab4.5_0003288g0050 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.2e-07 58.5 66 47.0
VMungo0647G0143 Vigna mungo HOM05D000862 ORTHO05D000943 3.2e-07 58.5 56 50.0
A05p33060 Brassica napus HOM05D000956 ORTHO05D001930 4.2e-07 58.2 92 39.1
MELO3C003820.2 Cucumis melo HOM05D000862 ORTHO05D000943 4.2e-07 58.2 56 51.8
DCAR_007605 Daucus carota HOM05D000862 ORTHO05D000943 4.2e-07 58.2 59 45.8
HanXRQChr02g0042151 Helianthus annuus HOM05D000862 ORTHO05D000943 4.2e-07 58.2 127 29.1
THA.LOC104817953 Tarenaya hassleriana HOM05D000956 ORTHO05D001930 4.2e-07 58.2 91 37.4
Zm00001eb167140 Zea mays HOM05D000862 ORTHO05D000452 4.2e-07 58.2 110 32.7
EL10Ac9g21139 Beta vulgaris HOM05D000862 ORTHO05D000943 5.5e-07 57.8 62 43.5
BcaC01g01301 Brassica carinata HOM05D000956 ORTHO05D003111 5.5e-07 57.8 71 36.6
C03p90390 Brassica napus HOM05D000956 ORTHO05D003111 5.5e-07 57.8 71 36.6
BolC3t21362H Brassica oleracea HOM05D000956 ORTHO05D003111 5.5e-07 57.8 71 36.6
Carub.0007s1858 Capsella rubella HOM05D000956 ORTHO05D001930 5.5e-07 57.8 85 40.0
AUR62014466 Chenopodium quinoa HOM05D000862 ORTHO05D000003 5.5e-07 57.8 52 50.0
Peaxi162Scf00417g01348 Petunia axillaris HOM05D000862 ORTHO05D000943 5.5e-07 57.8 109 31.2
Sed0009013 Sechium edule HOM05D000862 ORTHO05D000943 5.5e-07 57.8 53 56.6
AL3G29220 Arabidopsis lyrata HOM05D000956 ORTHO05D001930 7.2e-07 57.4 63 38.1
AL4G36650 Arabidopsis lyrata HOM05D000956 ORTHO05D001930 7.2e-07 57.4 92 32.6
BcaB04g17175 Brassica carinata HOM05D000956 ORTHO05D001930 7.2e-07 57.4 70 35.7
HanXRQChr09g0276011 Helianthus annuus HOM05D000862 ORTHO05D000943 7.2e-07 57.4 50 56.0
HanXRQChr16g0499801 Helianthus annuus HOM05D000862 ORTHO05D000943 7.2e-07 57.4 60 46.7
PGSC0003DMG402002511 Solanum tuberosum HOM05D000862 ORTHO05D000943 7.2e-07 57.4 56 50.0
PGSC0003DMG402002599 Solanum tuberosum HOM05D000862 ORTHO05D000943 7.2e-07 57.4 56 50.0
Aa31LG7G4300 Aethionema arabicum HOM05D000862 ORTHO05D000943 9.4e-07 57.0 54 55.6
A05p19620 Brassica napus HOM05D000956 ORTHO05D001930 9.4e-07 57.0 83 42.2
FAN03G2910 Fragaria x ananassa HOM05D000862 ORTHO05D000943 9.4e-07 57.0 56 46.4
FAN05G2992 Fragaria x ananassa HOM05D000862 ORTHO05D000943 9.4e-07 57.0 56 46.4
Os04g0369100 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000452 9.4e-07 57.0 105 36.2
Peaxi162Scf00183g00045 Petunia axillaris HOM05D000862 ORTHO05D000943 9.4e-07 57.0 49 55.1
Sp2g03250 Schrenkiella parvula HOM05D000956 ORTHO05D001930 9.4e-07 57.0 87 40.2
unitig_52.g17101 Utricularia gibba HOM05D000862 ORTHO05D000943 9.4e-07 57.0 62 48.4
Zm00001eb369990 Zea mays HOM05D000862 ORTHO05D000943 9.4e-07 57.0 96 31.2
BcaB02g09135 Brassica carinata HOM05D000956 ORTHO05D001930 1.2e-06 56.6 92 29.3
Ciclev10000604m.g Citrus clementina HOM05D000862 ORTHO05D000943 1.2e-06 56.6 65 44.6
CsaV3_3G045290 Cucumis sativus L. HOM05D000862 ORTHO05D000943 1.2e-06 56.6 52 53.8
Thhalv10011637m.g Eutrema salsugineum HOM05D000956 ORTHO05D001930 1.2e-06 56.6 87 40.2
Nitab4.5_0002616g0130 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.2e-06 56.6 66 43.9
Os02g0301800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.2e-06 56.6 53 50.9
THA.LOC104817952 Tarenaya hassleriana HOM05D000956 ORTHO05D001930 1.2e-06 56.6 85 40.0
AL1G60110 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 1.6e-06 56.2 70 37.1
AT1G33790 Arabidopsis thaliana HOM05D000956 ORTHO05D001930 1.6e-06 56.2 91 33.0
AT1G52040 Arabidopsis thaliana HOM05D000956 ORTHO05D001930 1.6e-06 56.2 97 34.0
BcaC04g22314 Brassica carinata HOM05D000956 ORTHO05D001930 1.6e-06 56.2 87 39.1
A09p16850 Brassica napus HOM05D000956 ORTHO05D001930 1.6e-06 56.2 87 39.1
C09p20790 Brassica napus HOM05D000956 ORTHO05D001930 1.6e-06 56.2 87 39.1
BolC4t22445H Brassica oleracea HOM05D000956 ORTHO05D001930 1.6e-06 56.2 92 31.5
BolC9t54974H Brassica oleracea HOM05D000956 ORTHO05D001930 1.6e-06 56.2 87 39.1
BraA09t37322Z Brassica rapa HOM05D000956 ORTHO05D001930 1.6e-06 56.2 87 39.1
Carub.0003s1620 Capsella rubella HOM05D000956 ORTHO05D001930 1.6e-06 56.2 84 36.9
Carub.0003s1621 Capsella rubella HOM05D000956 ORTHO05D001930 1.6e-06 56.2 75 40.0
CAN.G1668.2 Capsicum annuum HOM05D000862 ORTHO05D000943 1.6e-06 56.2 56 50.0
Cpa.g.sc131.20 Carica papaya HOM05D000862 ORTHO05D000943 1.6e-06 56.2 58 46.6
PSO541G2558 Papaver somniferum HOM05D000862 ORTHO05D000943 1.6e-06 56.2 143 29.4
SMO239G0108 Selaginella moellendorffii HOM05D016203 ORTHO05D018112 1.6e-06 56.2 94 39.4
SEGI_17442 Sequoiadendron giganteum HOM05D000862 ORTHO05D000943 1.6e-06 56.2 52 46.2
Solyc03g121300.2 Solanum lycopersicum HOM05D000862 ORTHO05D000943 1.6e-06 56.2 56 48.2
Sopen03g040110 Solanum pennellii HOM05D000862 ORTHO05D000943 1.6e-06 56.2 56 48.2
THA.LOC104817955 Tarenaya hassleriana HOM05D000956 ORTHO05D001930 1.6e-06 56.2 88 35.2
Aa31LG9G14370 Aethionema arabicum HOM05D000956 ORTHO05D001930 2.1e-06 55.8 48 52.1
AL5G26060 Arabidopsis lyrata HOM05D000956 ORTHO05D001930 2.1e-06 55.8 92 31.5
AT1G52030 Arabidopsis thaliana HOM05D000956 ORTHO05D001930 2.1e-06 55.8 70 37.1
Thhalv10027653m.g Eutrema salsugineum HOM05D000956 ORTHO05D001930 2.1e-06 55.8 70 37.1
FvH4_6g32860 Fragaria vesca HOM05D000862 ORTHO05D000943 2.1e-06 55.8 52 48.1
FAN14G1408 Fragaria x ananassa HOM05D000862 ORTHO05D000943 2.1e-06 55.8 52 48.1
vmacro21643 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 2.1e-06 55.8 51 51.0
Aa31LG8G3530 Aethionema arabicum HOM05D000956 ORTHO05D003111 2.7e-06 55.5 76 36.8
arahy.Tifrunner.gnm1.ann1.0CQZ6Z Arachis hypogaea HOM05D000862 ORTHO05D000003 2.7e-06 55.5 123 30.1
arahy.Tifrunner.gnm1.ann1.R4H24K Arachis hypogaea HOM05D000862 ORTHO05D000003 2.7e-06 55.5 123 30.1
EL10Ac1g00598 Beta vulgaris HOM05D000862 ORTHO05D000943 2.7e-06 55.5 52 48.1
BcaB07g31266 Brassica carinata HOM05D000956 ORTHO05D001930 2.7e-06 55.5 87 39.1
A01p37820 Brassica napus HOM05D000956 ORTHO05D001930 2.7e-06 55.5 63 36.5
BraA01t03843Z Brassica rapa HOM05D000956 ORTHO05D001930 2.7e-06 55.5 63 36.5
MELO3C003824.2 Cucumis melo HOM05D000862 ORTHO05D000943 2.7e-06 55.5 56 48.2
Thhalv10012374m.g Eutrema salsugineum HOM05D000956 ORTHO05D001930 2.7e-06 55.5 92 35.9
HanXRQChr09g0276021 Helianthus annuus HOM05D000862 ORTHO05D000943 2.7e-06 55.5 72 43.1
Nitab4.5_0002224g0030 Nicotiana tabacum HOM05D000862 ORTHO05D000943 2.7e-06 55.5 67 41.8
PSO675G6624 Papaver somniferum HOM05D000862 ORTHO05D000943 2.7e-06 55.5 141 29.1
PGR102G0574 Punica granatum HOM05D000862 ORTHO05D000943 2.7e-06 55.5 56 46.4
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 2.7e-06 55.5 52 51.9
AL3G47160 Arabidopsis lyrata HOM05D000956 ORTHO05D001930 3.6e-06 55.1 92 33.7
MSTRG.4758 Avicennia marina HOM05D000862 ORTHO05D000943 3.6e-06 55.1 65 43.1
A08p02420 Brassica napus HOM05D000956 ORTHO05D003111 3.6e-06 55.1 71 35.2
C01p47880 Brassica napus HOM05D000956 ORTHO05D001930 3.6e-06 55.1 63 36.5
BraA01t03840Z Brassica rapa HOM05D000956 ORTHO05D001930 3.6e-06 55.1 94 33.0
BraA08t32281Z Brassica rapa HOM05D000956 ORTHO05D003111 3.6e-06 55.1 71 35.2
CANSAT25G2036 Cannabis sativa HOM05D000862 ORTHO05D000943 3.6e-06 55.1 56 48.2
CARHR051410 Cardamine hirsuta HOM05D000956 ORTHO05D001930 3.6e-06 55.1 89 39.3
CARHR091680 Cardamine hirsuta HOM05D000956 ORTHO05D001930 3.6e-06 55.1 91 36.3
COL.COLO4_26231 Corchorus olitorius HOM05D000862 ORTHO05D000943 3.6e-06 55.1 54 44.4
Dinv39638 Davidia involucrata HOM05D001418 ORTHO05D002038 3.6e-06 55.1 57 47.4
Eucgr.F03098 Eucalyptus grandis HOM05D000862 ORTHO05D000943 3.6e-06 55.1 58 50.0
Psat5g157920 Pisum sativum HOM05D000862 ORTHO05D000943 3.6e-06 55.1 56 46.4
TAR633G0214 Trochodendron aralioides HOM05D000862 ORTHO05D000943 3.6e-06 55.1 49 53.1
AL2G15130 Arabidopsis lyrata HOM05D000956 ORTHO05D001930 4.7e-06 54.7 91 38.5
BcaC01g01302 Brassica carinata HOM05D000956 ORTHO05D003111 4.7e-06 54.7 66 36.4
C03p90400 Brassica napus HOM05D000956 ORTHO05D003111 4.7e-06 54.7 66 36.4
BolC1t04756H Brassica oleracea HOM05D000956 ORTHO05D001930 4.7e-06 54.7 63 36.5
BolC3t21363H Brassica oleracea HOM05D000956 ORTHO05D003111 4.7e-06 54.7 66 36.4
CANSAT54G1423 Cannabis sativa HOM05D000862 ORTHO05D000943 4.7e-06 54.7 75 37.3
Carub.0004s2136 Capsella rubella HOM05D000956 ORTHO05D001930 4.7e-06 54.7 89 30.3
Carub.0006s2257 Capsella rubella HOM05D000956 ORTHO05D001930 4.7e-06 54.7 83 36.1
CARHR051440 Cardamine hirsuta HOM05D000956 ORTHO05D001930 4.7e-06 54.7 87 37.9
CARHR259800 Cardamine hirsuta HOM05D000956 ORTHO05D001930 4.7e-06 54.7 97 32.0
Os05g0508400 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 4.7e-06 54.7 54 51.9
Peaxi162Scf00028g02010 Petunia axillaris HOM05D000862 ORTHO05D000943 4.7e-06 54.7 54 50.0
QL02p010300 Quercus lobata HOM05D000862 ORTHO05D000943 4.7e-06 54.7 145 31.0
SGA_v2.0_scaffold68G22937 Striga asiatica HOM05D000862 ORTHO05D000943 4.7e-06 54.7 61 44.3
THA.LOC104818133 Tarenaya hassleriana HOM05D000956 ORTHO05D001930 4.7e-06 54.7 85 31.8
Zm00001eb292320 Zea mays HOM05D000862 ORTHO05D000943 4.7e-06 54.7 54 51.9
Dinv39635 Davidia involucrata HOM05D000862 ORTHO05D000943 6.1e-06 54.3 57 47.4
Glyma.02G227500 Glycine max HOM05D000862 ORTHO05D000943 6.1e-06 54.3 55 47.3
Carub.0001s4095 Capsella rubella HOM05D000956 ORTHO05D003111 8.0e-06 53.9 70 37.1
CARHR101960 Cardamine hirsuta HOM05D000956 ORTHO05D001930 8.0e-06 53.9 92 29.3
CiPaw.02G142700 Carya illinoinensis HOM05D000862 ORTHO05D000943 8.0e-06 53.9 58 46.6
Ca_14945_v3 Cicer arietinum L. HOM05D000862 ORTHO05D000943 8.0e-06 53.9 55 49.1
HanXRQChr02g0047131 Helianthus annuus HOM05D000862 ORTHO05D000943 8.0e-06 53.9 51 49.0
Lsat_1_v5_gn_4_96261 Lactuca sativa HOM05D000862 ORTHO05D000943 8.0e-06 53.9 52 50.0


User provided reference genes

Program Settings