Gene: Carub.0003s1619
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0003s1619
- Transcript Identifier Carub.0003s1619.1
- Gene Type Coding gene
- Location scaffold_3 : 5716214-5718016 : positive
Gene Family Information
- ID HOM05D000956
- #Genes/#Species 627/88
- Phylogenetic origin
- ID ORTHO05D001930
- #Genes/#Species 336/12
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0003s1619.v1.1
- pacid 39240200
- synonym Carubv10016011m.g
Descriptions
- Description PTHR23244:SF208 - F14M2.9 PROTEIN-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT3G16450 |
| GO:0010043 | ISO | PLAZA Integrative Orthology | response to zinc ion | AT3G16450 |
| GO:0006952 | ISO | PLAZA Integrative Orthology | defense response | AT1G52040 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030246 | IEA | InterPro | carbohydrate binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G16450 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G16450 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT1G52040 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |