Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 2.1e-70 268.9 133 100.0
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 4.5e-28 128.3 129 58.9
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 1.1e-26 123.6 105 61.9
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 4.2e-26 121.7 98 62.2
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 4.2e-26 121.7 104 59.6
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 4.2e-26 121.7 127 52.0
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 5.5e-26 121.3 118 55.9
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 7.2e-26 120.9 117 55.6
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 9.4e-26 120.6 125 53.6
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 9.4e-26 120.6 133 51.9
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 9.4e-26 120.6 127 50.4
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 1.2e-25 120.2 101 59.4
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 1.2e-25 120.2 124 54.0
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 1.6e-25 119.8 124 51.6
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 1.6e-25 119.8 124 53.2
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 2.7e-25 119.0 117 51.3
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 2.7e-25 119.0 101 58.4
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 3.6e-25 118.6 105 57.1
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 3.6e-25 118.6 116 55.2
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 3.6e-25 118.6 129 52.7
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 3.6e-25 118.6 122 51.6
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 4.7e-25 118.2 130 49.2
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 4.7e-25 118.2 110 60.0
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 4.7e-25 118.2 123 52.8
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 4.7e-25 118.2 111 55.0
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 4.7e-25 118.2 101 61.4
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 6.1e-25 117.9 123 52.0
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 6.1e-25 117.9 123 51.2
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 8.0e-25 117.5 124 52.4
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 8.0e-25 117.5 131 50.4
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 8.0e-25 117.5 115 49.6
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 1.0e-24 117.1 99 57.6
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 1.4e-24 116.7 111 55.0
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 1.4e-24 116.7 117 52.1
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 1.4e-24 116.7 106 58.5
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 3.0e-24 115.5 117 53.0
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 3.0e-24 115.5 88 64.8
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 4.0e-24 115.2 123 50.4
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 4.0e-24 115.2 125 53.6
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 4.0e-24 115.2 100 61.0
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 5.2e-24 114.8 89 61.8
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 6.8e-24 114.4 117 53.0
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 6.8e-24 114.4 111 55.0
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 6.8e-24 114.4 116 53.4
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 6.8e-24 114.4 128 50.8
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 8.8e-24 114.0 115 53.9
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 8.8e-24 114.0 98 57.1
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 1.2e-23 113.6 86 59.3
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 1.2e-23 113.6 90 61.1
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 1.5e-23 113.2 115 47.8
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 2.0e-23 112.8 88 61.4
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 2.0e-23 112.8 120 52.5
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 2.0e-23 112.8 130 50.8
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 2.6e-23 112.5 88 61.4
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 2.6e-23 112.5 109 56.0
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 3.4e-23 112.1 132 48.5
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 3.4e-23 112.1 101 58.4
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 4.4e-23 111.7 116 50.9
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 4.4e-23 111.7 104 53.8
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 4.4e-23 111.7 149 46.3
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 5.7e-23 111.3 116 53.4
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 5.7e-23 111.3 126 50.8
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 5.7e-23 111.3 126 50.8
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 5.7e-23 111.3 117 54.7
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 7.5e-23 110.9 126 50.8
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 9.8e-23 110.5 136 47.8
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 1.3e-22 110.2 105 54.3
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 1.3e-22 110.2 100 57.0
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 1.7e-22 109.8 109 51.4
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 1.7e-22 109.8 128 50.8
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 2.8e-22 109.0 89 58.4
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 8.3e-22 107.5 134 47.8
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 1.1e-21 107.1 99 54.5
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 1.1e-21 107.1 131 51.1
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 1.4e-21 106.7 107 56.1
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 1.4e-21 106.7 90 58.9
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 7.0e-21 104.4 99 58.6
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 1.2e-20 103.6 91 52.7
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 2.0e-20 102.8 117 48.7
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 4.5e-20 101.7 122 45.1
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 1.0e-19 100.5 101 49.5
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 1.3e-19 100.1 119 46.2
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 2.9e-19 99.0 103 49.5
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 2.9e-19 99.0 122 49.2
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 3.8e-19 98.6 117 48.7
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 3.8e-19 98.6 99 51.5
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 6.6e-19 97.8 101 50.5
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 6.6e-19 97.8 103 54.4
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 2.5e-18 95.9 90 52.2
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 3.6e-17 92.0 84 51.2
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 6.1e-17 91.3 99 48.5
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 1.5e-15 86.7 115 42.6
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 2.8e-14 82.4 95 47.4
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 3.2e-13 79.0 95 46.3
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 2.0e-12 76.3 73 47.9
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 1.8e-08 63.2 128 32.8
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 2.9e-06 55.8 45 48.9


User provided reference genes

Program Settings