Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 1.0e-70 270.0 141 100.0
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 1.7e-49 199.5 131 78.6
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 6.2e-44 181.0 138 66.7
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 7.1e-40 167.5 142 65.5
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 7.1e-40 167.5 131 67.9
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 1.6e-39 166.4 133 66.2
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 1.8e-38 162.9 144 63.2
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 3.9e-38 161.8 143 62.9
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 1.5e-37 159.8 133 63.2
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 2.5e-37 159.1 152 59.9
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 2.5e-37 159.1 135 63.7
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 3.3e-37 158.7 139 63.3
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 3.3e-37 158.7 141 58.2
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 5.7e-37 157.9 133 64.7
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 9.6e-37 157.1 137 62.0
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 1.3e-36 156.8 141 57.4
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 8.2e-36 154.1 134 62.7
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 1.1e-35 153.7 138 59.4
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 1.8e-35 152.9 138 62.3
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 2.0e-34 149.4 142 57.0
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 2.0e-34 149.4 126 61.1
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 1.0e-33 147.1 121 62.8
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 1.3e-33 146.7 135 58.5
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 1.3e-33 146.7 114 68.4
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.3e-33 146.7 135 59.3
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 1.3e-33 146.7 137 59.9
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 2.2e-33 146.0 138 60.1
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 2.2e-33 146.0 135 57.8
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 1.1e-32 143.7 140 54.3
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 4.2e-32 141.7 140 53.6
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 4.2e-32 141.7 135 59.3
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 4.6e-31 138.3 140 51.4
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 1.0e-30 137.1 128 57.0
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 1.0e-30 137.1 118 57.6
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 2.3e-30 136.0 130 53.8
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 5.1e-30 134.8 134 53.7
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 6.7e-30 134.4 144 54.9
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 8.7e-30 134.0 134 51.5
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 8.7e-30 134.0 144 54.2
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 8.7e-30 134.0 141 53.9
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 8.7e-30 134.0 135 54.1
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 8.7e-30 134.0 120 59.2
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 1.1e-29 133.7 134 53.7
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 1.9e-29 132.9 140 54.3
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 3.3e-29 132.1 134 56.7
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 4.3e-29 131.7 132 59.8
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 5.7e-29 131.3 142 51.4
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 7.4e-29 131.0 144 53.5
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 7.4e-29 131.0 129 53.5
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.3e-28 130.2 133 54.9
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 1.3e-28 130.2 141 49.6
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.6e-28 129.8 136 58.1
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 2.2e-28 129.4 130 54.6
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 6.3e-28 127.9 132 51.5
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 6.3e-28 127.9 142 50.0
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 1.4e-27 126.7 138 53.6
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 3.1e-27 125.6 132 57.6
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 9.1e-27 124.0 141 48.2
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 1.5e-26 123.2 117 58.1
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 2.6e-26 122.5 157 46.5
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 5.9e-26 121.3 135 48.1
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 1.0e-25 120.6 135 48.1
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 1.0e-25 120.6 129 51.9
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 2.2e-25 119.4 135 48.1
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 2.9e-25 119.0 138 47.8
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 3.8e-25 118.6 98 63.3
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.1e-24 117.1 135 48.9
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 2.5e-24 115.9 135 48.1
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 5.5e-24 114.8 131 46.6
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 7.2e-24 114.4 133 48.1
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 9.4e-24 114.0 135 46.7
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 1.6e-23 113.2 136 45.6
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 2.1e-23 112.8 133 46.6
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 2.1e-23 112.8 132 50.0
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 6.1e-23 111.3 128 46.1
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 6.1e-23 111.3 135 45.9
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 1.0e-22 110.5 133 45.9
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 1.4e-22 110.2 135 45.9
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 2.3e-22 109.4 128 49.2
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 3.0e-22 109.0 126 50.8
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 3.9e-22 108.6 133 49.6
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 5.1e-22 108.2 133 45.1
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 6.7e-22 107.8 133 45.9
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 8.2e-20 100.9 107 51.4
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 7.2e-16 87.8 138 42.0
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 1.6e-15 86.7 93 41.9
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 6.1e-15 84.7 83 56.6
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 5.2e-14 81.6 75 57.3
FvH4_4g34180 Fragaria vesca HOM05D006564 ORTHO05D007772 5.9e-10 68.2 135 39.3
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 8.5e-09 64.3 104 36.5
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 7.2e-08 61.2 64 51.6
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 2.7e-07 59.3 42 73.8


User provided reference genes

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