Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2P860T6 Lonicera japonica HOM05D003093 ORTHO05D019262 1.4e-72 276.2 141 100.0
Lj2P868T23 Lonicera japonica HOM05D003093 ORTHO05D019262 3.0e-70 268.5 141 97.9
Lj2P843T9 Lonicera japonica HOM05D003093 ORTHO05D019262 9.6e-69 263.5 141 95.0
Lj2P861T17 Lonicera japonica HOM05D003093 ORTHO05D019262 3.3e-61 238.4 141 85.8
Lj2A842G6 Lonicera japonica HOM05D003093 ORTHO05D019262 1.1e-59 233.4 141 83.0
Lj2A860T8 Lonicera japonica HOM05D003093 ORTHO05D019262 4.5e-58 228.0 141 82.3
Lj2A862T14 Lonicera japonica HOM05D003093 ORTHO05D019262 2.0e-10 69.7 87 47.1
Lj2A846T19 Lonicera japonica HOM05D003093 ORTHO05D019262 1.0e-09 67.4 88 45.5
Lj2C863G7 Lonicera japonica HOM05D003093 ORTHO05D004301 1.5e-08 63.5 87 44.8
Peaxi162Scf00015g02612 Petunia axillaris HOM05D003093 ORTHO05D004301 6.1e-07 58.2 82 42.7
CAN.G546.16 Capsicum annuum HOM05D003093 ORTHO05D004301 1.0e-06 57.4 82 43.9
FAN03G1537 Fragaria x ananassa HOM05D003093 ORTHO05D004301 1.0e-06 57.4 82 42.7
Ah.10g033320 Amaranthus hybridus HOM05D003093 ORTHO05D004301 1.8e-06 56.6 82 45.1
Duzib114G0430 Durio zibethinus HOM05D003093 ORTHO05D004301 1.8e-06 56.6 82 43.9
Duzib114G0987 Durio zibethinus HOM05D003093 ORTHO05D004301 1.8e-06 56.6 82 43.9
Gorai.010G203000 Gossypium raimondii HOM05D003093 ORTHO05D004301 1.8e-06 56.6 82 43.9
Eucgr.G02772 Eucalyptus grandis HOM05D003093 ORTHO05D004301 2.3e-06 56.2 82 42.7
Gohir.A06G177800 Gossypium hirsutum HOM05D003093 ORTHO05D004301 2.3e-06 56.2 82 43.9
Gohir.D06G173600 Gossypium hirsutum HOM05D003093 ORTHO05D004301 2.3e-06 56.2 82 42.7
PSO541G5925 Papaver somniferum HOM05D003093 ORTHO05D004301 2.3e-06 56.2 82 42.7
PSO675G6375 Papaver somniferum HOM05D003093 ORTHO05D004301 2.3e-06 56.2 82 42.7
Hund22428 Selenicereus undatus HOM05D003093 ORTHO05D004301 2.3e-06 56.2 82 43.9
PGSC0003DMG400023507 Solanum tuberosum HOM05D003093 ORTHO05D004301 2.3e-06 56.2 82 45.1
Dinv31391 Davidia involucrata HOM05D003093 ORTHO05D004301 3.0e-06 55.8 82 43.9
FvH4_7g20820 Fragaria vesca HOM05D003093 ORTHO05D004301 3.0e-06 55.8 82 42.7
FAN01G1069 Fragaria x ananassa HOM05D003093 ORTHO05D004301 3.0e-06 55.8 82 42.7
FAN01G1115 Fragaria x ananassa HOM05D003093 ORTHO05D004301 3.0e-06 55.8 82 42.7
FAN01G1323 Fragaria x ananassa HOM05D003093 ORTHO05D004301 3.0e-06 55.8 82 42.7
FAN06G1239 Fragaria x ananassa HOM05D003093 ORTHO05D004301 3.0e-06 55.8 82 42.7
FAN06G3924 Fragaria x ananassa HOM05D003093 ORTHO05D004301 3.0e-06 55.8 82 42.7
FAN10G3079 Fragaria x ananassa HOM05D003093 ORTHO05D004301 3.0e-06 55.8 82 42.7
Gohir.D10G218100 Gossypium hirsutum HOM05D003093 ORTHO05D004301 3.0e-06 55.8 82 42.7
Gorai.011G244700 Gossypium raimondii HOM05D003093 ORTHO05D004301 3.0e-06 55.8 82 42.7
Manes.07G106800 Manihot esculenta HOM05D003093 ORTHO05D004301 3.0e-06 55.8 82 41.5
Mapoly0014s0207 Marchantia polymorpha HOM05D003093 ORTHO05D004301 3.0e-06 55.8 82 42.7
CiPaw.01G280100 Carya illinoinensis HOM05D003093 ORTHO05D004301 4.0e-06 55.5 82 42.7
Duzib128G1511 Durio zibethinus HOM05D003093 ORTHO05D004301 4.0e-06 55.5 82 42.7
PGR142G0268 Punica granatum HOM05D003093 ORTHO05D004301 4.0e-06 55.5 82 41.5
Solyc06g036580.4 Solanum lycopersicum HOM05D003093 ORTHO05D004301 4.0e-06 55.5 82 42.7
Sopen05g033340 Solanum pennellii HOM05D003093 ORTHO05D004301 4.0e-06 55.5 82 43.9
Gohir.A10G209800 Gossypium hirsutum HOM05D003093 ORTHO05D004301 5.2e-06 55.1 82 42.7
Lalb_Chr02g0143891 Lupinus albus HOM05D003093 ORTHO05D004301 5.2e-06 55.1 82 41.5
Sp1g24240 Schrenkiella parvula HOM05D003093 ORTHO05D004301 5.2e-06 55.1 118 39.0
ATR0580G275 Amborella trichopoda HOM05D003093 ORTHO05D004301 6.7e-06 54.7 82 41.5
arahy.Tifrunner.gnm1.ann1.59ZZV8 Arachis hypogaea HOM05D003093 ORTHO05D004301 6.7e-06 54.7 82 40.2
CARHR027510 Cardamine hirsuta HOM05D003093 ORTHO05D004301 6.7e-06 54.7 118 37.3
CiPaw.02G178700 Carya illinoinensis HOM05D003093 ORTHO05D004301 6.7e-06 54.7 82 43.9
Lj1A929G70 Lonicera japonica HOM05D003093 ORTHO05D004301 6.7e-06 54.7 82 41.5
HPP92_019592 Vanilla planifolia HOM05D003093 ORTHO05D004301 6.7e-06 54.7 97 39.2
GSVIVG01032624001 Vitis vinifera HOM05D003093 ORTHO05D004301 6.7e-06 54.7 82 42.7
Atru.chr12.590 Acer truncatum HOM05D003093 ORTHO05D004301 8.8e-06 54.3 82 41.5
Manes.10G038800 Manihot esculenta HOM05D003093 ORTHO05D004301 8.8e-06 54.3 82 41.5
Solyc05g054880.3 Solanum lycopersicum HOM05D003093 ORTHO05D004301 8.8e-06 54.3 82 43.9
THA.LOC104827309 Tarenaya hassleriana HOM05D003093 ORTHO05D004301 8.8e-06 54.3 118 37.3


User provided reference genes

Program Settings