Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0014354 Lotus japonicus HOM05D000112 ORTHO05D005753 1.7e-32 142.1 75 100.0
Lj1g0017884 Lotus japonicus HOM05D000112 ORTHO05D005753 2.5e-23 111.7 73 79.5
Lalb_Chr23g0266231 Lupinus albus HOM05D000112 ORTHO05D005753 1.9e-15 85.5 73 68.5
Phvul.001G008200 Phaseolus vulgaris HOM05D000112 ORTHO05D005753 1.9e-15 85.5 73 71.2
Sabra05G0183000 Salix brachista HOM05D000112 ORTHO05D005753 3.2e-15 84.7 73 71.2
VMungo0647G2445 Vigna mungo HOM05D000112 ORTHO05D005753 4.2e-15 84.3 73 69.9
GSVIVG01009865001 Vitis vinifera HOM05D000112 ORTHO05D005753 9.4e-15 83.2 73 69.9
Medtr1g024025 Medicago truncatula HOM05D000112 ORTHO05D005753 1.2e-14 82.8 73 69.9
Psat6g004320 Pisum sativum HOM05D000112 ORTHO05D005753 1.2e-14 82.8 73 69.9
Glyma.17G256500 Glycine max HOM05D000112 ORTHO05D005753 1.6e-14 82.4 73 68.5
Glyma.14G217700 Glycine max HOM05D000112 ORTHO05D005753 2.1e-14 82.0 73 68.5
Potri.002G024700 Populus trichocarpa HOM05D000112 ORTHO05D005753 2.7e-14 81.6 73 68.5
Cpa.g.sc26.24 Carica papaya HOM05D000112 ORTHO05D005753 3.6e-14 81.3 73 69.9
Potri.005G236700 Populus trichocarpa HOM05D000112 ORTHO05D005753 3.6e-14 81.3 73 67.1
Sabra02G0020000 Salix brachista HOM05D000112 ORTHO05D005753 1.0e-13 79.7 73 67.1
CSS0001727 Camellia sinensis var. sinensis HOM05D000112 ORTHO05D005753 1.4e-13 79.3 73 63.0
Ca_13406_v3 Cicer arietinum L. HOM05D000112 ORTHO05D005753 2.3e-13 78.6 74 70.3
TWI36G0522 Tripterygium wilfordii HOM05D000112 ORTHO05D005753 3.0e-13 78.2 73 67.1
DCAR_022437 Daucus carota HOM05D000112 ORTHO05D005753 4.0e-13 77.8 73 65.8
CAN.G1271.14 Capsicum annuum HOM05D000112 ORTHO05D005753 5.2e-13 77.4 70 64.3
Prupe.1G368300 Prunus persica HOM05D000112 ORTHO05D005753 6.8e-13 77.0 70 64.3
Solyc04g081240.2 Solanum lycopersicum HOM05D000112 ORTHO05D005753 6.8e-13 77.0 70 64.3
Sopen04g034850 Solanum pennellii HOM05D000112 ORTHO05D005753 6.8e-13 77.0 70 64.3
Actinidia15406 Actinidia chinensis HOM05D000112 ORTHO05D005753 8.8e-13 76.6 73 63.0
Actinidia16967 Actinidia chinensis HOM05D000112 ORTHO05D005753 2.0e-12 75.5 73 61.6
Dinv39501 Davidia involucrata HOM05D000112 ORTHO05D005753 2.0e-12 75.5 73 63.0
HanXRQChr08g0234951 Helianthus annuus HOM05D000112 ORTHO05D005753 2.0e-12 75.5 70 62.9
PGSC0003DMG400003771 Solanum tuberosum HOM05D000112 ORTHO05D005753 2.0e-12 75.5 70 62.9
vmacro21712 Vaccinium macrocarpon HOM05D000112 ORTHO05D005753 2.0e-12 75.5 70 61.4
Thecc.08G041300 Theobroma cacao HOM05D000112 ORTHO05D005753 2.6e-12 75.1 73 63.0
arahy.Tifrunner.gnm1.ann1.N1Z0FN Arachis hypogaea HOM05D000112 ORTHO05D005753 3.4e-12 74.7 73 67.1
COL.COLO4_26172 Corchorus olitorius HOM05D000112 ORTHO05D005753 3.4e-12 74.7 73 63.0
Duzib093G0353 Durio zibethinus HOM05D000112 ORTHO05D005753 3.4e-12 74.7 73 64.4
Lj4C28T5 Lonicera japonica HOM05D000112 ORTHO05D005753 3.4e-12 74.7 73 63.0
Rhsim06G0023400 Rhododendron simsii HOM05D000112 ORTHO05D005753 3.4e-12 74.7 70 61.4
Sc02g0008450 Simmondsia chinensis HOM05D000112 ORTHO05D005753 3.4e-12 74.7 73 60.3
Hund05215 Selenicereus undatus HOM05D000112 ORTHO05D005753 4.4e-12 74.3 73 63.0
Hund27907 Selenicereus undatus HOM05D000112 ORTHO05D005753 4.4e-12 74.3 73 63.0
TPR.G34351 Trifolium pratense HOM05D000112 ORTHO05D005753 4.4e-12 74.3 73 67.1
TWI56G0085 Tripterygium wilfordii HOM05D000112 ORTHO05D005753 4.4e-12 74.3 73 63.0
Nn5g29278 Nelumbo nucifera HOM05D000112 ORTHO05D005753 7.5e-12 73.6 70 61.4
Oeu054709.1 Olea europaea HOM05D000112 ORTHO05D005753 7.5e-12 73.6 70 60.0
DCAR_017496 Daucus carota HOM05D000112 ORTHO05D005753 9.7e-12 73.2 73 61.6
Dinv31827 Davidia involucrata HOM05D000112 ORTHO05D005753 9.7e-12 73.2 73 58.9
Eucgr.F02090 Eucalyptus grandis HOM05D000112 ORTHO05D005753 9.7e-12 73.2 73 60.3
RcHm_v2.0_Chr6g0302551 Rosa chinensis HOM05D000112 ORTHO05D005753 9.7e-12 73.2 73 61.6
FvH4_2g38760 Fragaria vesca HOM05D000112 ORTHO05D005753 1.3e-11 72.8 73 61.6
PGR031G3443 Punica granatum HOM05D000112 ORTHO05D005753 1.3e-11 72.8 73 54.8
Hma1.2p1_0638F.1_g193660 Hydrangea macrophylla HOM05D000112 ORTHO05D005753 1.7e-11 72.4 71 62.0
MSTRG.1209 Avicennia marina HOM05D000112 ORTHO05D005753 2.2e-11 72.0 73 56.2
CANSAT25G2524 Cannabis sativa HOM05D000112 ORTHO05D005753 2.2e-11 72.0 73 60.3
Ciclev10000183m.g Citrus clementina HOM05D000112 ORTHO05D005753 2.2e-11 72.0 68 64.7
Duzib116G0112 Durio zibethinus HOM05D000112 ORTHO05D005753 2.2e-11 72.0 73 61.6
ECA238G1919 Erigeron canadensis HOM05D000112 ORTHO05D005753 2.2e-11 72.0 70 61.4
FAN20G0856 Fragaria x ananassa HOM05D000112 ORTHO05D005753 2.2e-11 72.0 73 61.6
FAN27G1707 Fragaria x ananassa HOM05D000112 ORTHO05D005753 2.2e-11 72.0 73 61.6
Lalb_Chr22g0354411 Lupinus albus HOM05D000112 ORTHO05D005753 2.2e-11 72.0 70 65.7
ClCG05G018490 Citrullus lanatus HOM05D000112 ORTHO05D005753 2.8e-11 71.6 70 61.4
FAN15G2249 Fragaria x ananassa HOM05D000112 ORTHO05D005753 2.8e-11 71.6 73 61.6
Lj5g0026835 Lotus japonicus HOM05D000112 ORTHO05D005753 2.8e-11 71.6 73 65.8
PSO151G0108 Papaver somniferum HOM05D000112 ORTHO05D005753 2.8e-11 71.6 73 57.5
PSO170G3277 Papaver somniferum HOM05D000112 ORTHO05D005753 2.8e-11 71.6 73 57.5
PSO210G7034 Papaver somniferum HOM05D000112 ORTHO05D005753 2.8e-11 71.6 73 57.5
Nn6g32307 Nelumbo nucifera HOM05D000112 ORTHO05D005753 3.7e-11 71.2 70 61.4
arahy.Tifrunner.gnm1.ann1.HEXM1C Arachis hypogaea HOM05D000112 ORTHO05D001918 4.8e-11 70.9 73 60.3
arahy.Tifrunner.gnm1.ann1.S8K9LU Arachis hypogaea HOM05D000112 ORTHO05D001918 4.8e-11 70.9 73 60.3
CiPaw.07G152500 Carya illinoinensis HOM05D000112 ORTHO05D005753 4.8e-11 70.9 73 60.3
Lsat_1_v5_gn_2_12381 Lactuca sativa HOM05D000112 ORTHO05D005753 4.8e-11 70.9 70 58.6
Peaxi162Scf00287g00193 Petunia axillaris HOM05D000112 ORTHO05D005753 4.8e-11 70.9 70 64.3
Sed0022302 Sechium edule HOM05D000112 ORTHO05D005753 4.8e-11 70.9 70 60.0
AUR62035726 Chenopodium quinoa HOM05D000112 ORTHO05D005753 6.3e-11 70.5 74 64.9
Cc10_g01900 Coffea canephora HOM05D000112 ORTHO05D005753 6.3e-11 70.5 70 60.0
QL02p011050 Quercus lobata HOM05D000112 ORTHO05D005753 6.3e-11 70.5 73 60.3
Lalb_Chr14g0369771 Lupinus albus HOM05D000112 ORTHO05D005753 8.3e-11 70.1 73 61.6
Aa31LG7G4360 Aethionema arabicum HOM05D000112 ORTHO05D005753 1.1e-10 69.7 76 63.2
AUR62035439 Chenopodium quinoa HOM05D000112 ORTHO05D005753 1.4e-10 69.3 74 63.5
MELO3C003768.2 Cucumis melo HOM05D000112 ORTHO05D005753 1.4e-10 69.3 70 60.0
CsaV3_3G045690 Cucumis sativus L. HOM05D000112 ORTHO05D005753 1.4e-10 69.3 70 60.0
Migut.C00816 Erythranthe guttata HOM05D000112 ORTHO05D005753 1.8e-10 68.9 70 57.1
Manes.18G015400 Manihot esculenta HOM05D000112 ORTHO05D005753 1.8e-10 68.9 73 57.5
Ah.00g000050 Amaranthus hybridus HOM05D000112 ORTHO05D005753 2.4e-10 68.6 73 58.9
Aqoxy5G01446 Aquilegia oxysepala HOM05D000112 ORTHO05D005753 2.4e-10 68.6 73 57.5
SalBow8G2227 Salvia bowleyana HOM05D000112 ORTHO05D005753 2.4e-10 68.6 73 57.5
SalBow8G4964 Salvia bowleyana HOM05D000112 ORTHO05D005753 2.4e-10 68.6 73 57.5
TAR625G0794 Trochodendron aralioides HOM05D000112 ORTHO05D005753 2.4e-10 68.6 73 57.5
AL1G32580 Arabidopsis lyrata HOM05D000112 ORTHO05D005753 4.1e-10 67.8 74 60.8
Sed0018524 Sechium edule HOM05D000112 ORTHO05D005753 4.1e-10 67.8 68 58.8
Carub.0001s1937 Capsella rubella HOM05D000112 ORTHO05D005753 5.3e-10 67.4 74 60.8
Gohir.D05G190900 Gossypium hirsutum HOM05D000112 ORTHO05D005753 5.3e-10 67.4 73 56.2
Gorai.009G196100 Gossypium raimondii HOM05D000112 ORTHO05D005753 5.3e-10 67.4 73 56.2
SGA_v2.0_scaffold11G05891 Striga asiatica HOM05D000112 ORTHO05D005753 5.3e-10 67.4 73 50.7
TAR381G1492 Trochodendron aralioides HOM05D000112 ORTHO05D005753 5.3e-10 67.4 73 57.5
MSTRG.25227 Avicennia marina HOM05D000112 ORTHO05D005753 7.0e-10 67.0 73 54.8
MD08G1015500 Malus domestica HOM05D000112 ORTHO05D005753 9.1e-10 66.6 73 58.9
THA.LOC104811390 Tarenaya hassleriana HOM05D000112 ORTHO05D005753 9.1e-10 66.6 76 59.2
EL10Ac1g02262 Beta vulgaris HOM05D000112 ORTHO05D005753 1.6e-09 65.9 75 60.0
Gohir.A05G187900 Gossypium hirsutum HOM05D000112 ORTHO05D005753 1.6e-09 65.9 73 54.8
Gohir.D01G099100 Gossypium hirsutum HOM05D000112 ORTHO05D005753 1.6e-09 65.9 73 60.3
Sp1g17650 Schrenkiella parvula HOM05D000112 ORTHO05D005753 1.6e-09 65.9 73 60.3
MSTRG.22332 Avicennia marina HOM05D000112 ORTHO05D005753 2.0e-09 65.5 73 54.8
unitig_8.g4916 Utricularia gibba HOM05D000112 ORTHO05D005753 2.0e-09 65.5 70 55.7
THA.LOC104813800 Tarenaya hassleriana HOM05D000112 ORTHO05D005753 2.7e-09 65.1 76 59.2
MD15G1014400 Malus domestica HOM05D000112 ORTHO05D005753 3.5e-09 64.7 73 58.9
Ah.11g039440 Amaranthus hybridus HOM05D000112 ORTHO05D005753 4.5e-09 64.3 74 59.5
Thhalv10006748m.g Eutrema salsugineum HOM05D000112 ORTHO05D005753 4.5e-09 64.3 73 58.9
Gohir.A01G112300 Gossypium hirsutum HOM05D000112 ORTHO05D005753 4.5e-09 64.3 73 58.9
Gorai.002G124400 Gossypium raimondii HOM05D000112 ORTHO05D005753 4.5e-09 64.3 73 58.9
CARHR020350 Cardamine hirsuta HOM05D000112 ORTHO05D005753 5.9e-09 63.9 73 58.9
MBI05_g26503_MAGBIO Magnolia biondii HOM05D000112 ORTHO05D005753 5.9e-09 63.9 70 54.3
AT1G19850 Arabidopsis thaliana HOM05D000112 ORTHO05D005753 7.7e-09 63.5 74 58.1
BcaC07g39004 Brassica carinata HOM05D000112 ORTHO05D005753 6.5e-08 60.5 72 55.6
A08p29650 Brassica napus HOM05D000112 ORTHO05D005753 6.5e-08 60.5 72 55.6
C08p19760 Brassica napus HOM05D000112 ORTHO05D005753 6.5e-08 60.5 72 55.6
BolC8t49613H Brassica oleracea HOM05D000112 ORTHO05D005753 6.5e-08 60.5 72 55.6
BraA08t34901Z Brassica rapa HOM05D000112 ORTHO05D005753 6.5e-08 60.5 72 55.6
Cfa013927 Carpinus fangiana HOM05D000112 ORTHO05D005753 8.5e-08 60.1 74 56.8
BcaB03g12896 Brassica carinata HOM05D000112 ORTHO05D005753 1.1e-07 59.7 71 54.9
BcaB07g32003 Brassica carinata HOM05D000112 ORTHO05D005753 8.0e-06 53.5 74 54.1


User provided reference genes

Program Settings