Gene: Solyc04g081240.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g081240.2
  • Transcript Identifier Solyc04g081240.2.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 63197510-63202493 : negative

Gene Family Information

  • ID HOM05D000112
  • #Genes/#Species 3032/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g081240.2.1
  • gene_id Solyc04g081240

Descriptions

  • Description Auxin Response Factor 5
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009725
IEA
InterProresponse to hormone
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G19850
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G19850
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G19850
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT1G19850
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT1G19850
GO:0048507
ISO
PLAZA Integrative Orthologymeristem development AT1G19850
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G19850
GO:0009942
ISO
PLAZA Integrative Orthologylongitudinal axis specification AT1G19850

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G19850
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G19850
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G19850
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G19850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010525 Auxin response factor domain
IPR044835 Auxin response factor
IPR033389 AUX/IAA domain
IPR003340 B3 DNA binding domain
IPR015300 DNA-binding pseudobarrel domain superfamily
Mapman id Description
15.5.5.1 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (ARF)