Gene: Sopen04g034850

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g034850
  • Transcript Identifier Sopen04g034850.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 75852587-75857579 : negative

Gene Family Information

  • ID HOM05D000112
  • #Genes/#Species 3032/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g034850.1

Descriptions

  • Description Encodes a transcription factor (IAA24) mediating embryo axis formation and vascular development. Similar to AUXIN RESPONSIVE FACTOR 1 (ARF1) shown to bind to auxin responsive elements (AREs), and to the maize transcriptional activator VIVIPAROUS 1( VP1). In situ hybridization shows expression in provascular tissue of embryos, the emerging shoot primordia, then is restricted to provascular tissue, and in the root central vascular cylinder. | MONOPTEROS (MP) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, promoter binding | INVOLVED IN: in 8 processes | LOCATED IN: nucleus, membrane | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation , Transcriptional factor B3 , AUX/IAA protein , Auxin response factor | BEST Arabidopsis thaliana protein match is: auxin response factor 19
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009725
IEA
InterProresponse to hormone
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G19850
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G19850
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G19850
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT1G19850
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT1G19850
GO:0048507
ISO
PLAZA Integrative Orthologymeristem development AT1G19850
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G19850
GO:0009942
ISO
PLAZA Integrative Orthologylongitudinal axis specification AT1G19850

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G19850
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G19850
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G19850
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G19850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010525 Auxin response factor domain
IPR003340 B3 DNA binding domain
IPR044835 Auxin response factor
IPR033389 AUX/IAA domain
IPR015300 DNA-binding pseudobarrel domain superfamily
Mapman id Description
15.5.5.1 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (ARF)