Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 4.1e-262 907.5 460 100.0
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 2.1e-226 788.9 459 85.0
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 9.0e-225 783.5 459 84.3
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 2.9e-223 778.5 459 84.3
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 1.7e-220 769.2 444 86.7
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 3.3e-219 765.0 458 83.4
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 4.0e-217 758.1 456 84.2
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 3.4e-216 755.0 460 81.1
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 5.8e-216 754.2 460 81.1
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 6.0e-205 717.6 559 68.2
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 6.7e-196 687.6 399 86.7
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 2.1e-173 612.8 464 66.8
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 4.7e-173 611.7 463 67.2
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 6.1e-173 611.3 460 67.4
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 9.7e-171 604.0 463 66.7
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 9.7e-171 604.0 471 65.6
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 2.2e-170 602.8 475 64.4
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 5.3e-169 598.2 468 66.5
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 7.0e-169 597.8 459 64.3
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 3.5e-168 595.5 451 67.0
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 7.7e-168 594.3 463 65.4
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 4.2e-166 588.6 460 66.1
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 9.4e-166 587.4 461 64.4
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 9.4e-166 587.4 462 66.2
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 6.1e-165 584.7 471 64.5
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 8.0e-165 584.3 476 62.6
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 1.5e-163 580.1 461 64.6
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.6e-163 579.3 440 66.6
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 2.6e-163 579.3 473 63.6
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 1.1e-161 573.9 458 62.7
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 9.1e-161 570.9 477 61.4
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 9.1e-161 570.9 464 64.0
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 3.5e-160 568.9 454 64.5
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 4.5e-160 568.5 456 63.8
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 2.9e-159 565.8 451 64.5
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 2.7e-157 559.3 458 61.8
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 2.7e-157 559.3 470 62.1
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 4.0e-156 555.4 461 62.3
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 6.8e-156 554.7 457 59.7
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 8.8e-156 554.3 461 62.3
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.5e-155 553.5 474 59.7
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 9.8e-155 550.8 458 60.3
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 1.3e-154 550.4 460 60.7
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 3.7e-154 548.9 458 61.1
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 4.9e-154 548.5 461 61.6
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 7.0e-153 544.7 466 61.2
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 9.2e-153 544.3 458 60.3
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 1.2e-152 543.9 457 59.7
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 2.3e-151 539.7 467 58.0
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 3.8e-151 538.9 480 56.7
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 5.0e-151 538.5 467 60.4
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 3.3e-150 535.8 471 58.6
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 5.6e-150 535.0 458 59.8
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 1.6e-149 533.5 480 57.1
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 6.1e-149 531.6 470 58.9
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 8.0e-149 531.2 483 56.5
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 1.0e-148 530.8 458 60.0
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 1.0e-148 530.8 480 56.9
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 2.3e-148 529.6 458 59.4
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 3.0e-148 529.3 492 57.1
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.0e-148 529.3 465 58.7
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 5.2e-148 528.5 477 58.3
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 8.9e-148 527.7 478 58.4
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.9e-148 527.7 464 58.8
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 2.6e-147 526.2 456 60.5
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 3.4e-147 525.8 504 55.4
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 4.4e-147 525.4 458 59.4
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 5.7e-147 525.0 434 62.4
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 1.3e-146 523.9 481 57.8
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 1.4e-145 520.4 469 57.8
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 2.4e-145 519.6 468 58.3
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 2.4e-145 519.6 520 55.0
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 4.1e-145 518.8 435 60.5
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 5.4e-145 518.5 460 59.8
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 4.6e-144 515.4 463 58.1
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 7.8e-144 514.6 389 67.6
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 4.7e-141 505.4 481 56.8
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 4.0e-140 502.3 465 55.3
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.0e-139 500.0 468 54.7
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.6e-139 499.6 500 52.0
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 5.4e-137 491.9 371 69.0
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 1.2e-136 490.7 450 56.4
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 2.1e-133 479.9 470 55.5
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 2.1e-133 479.9 468 53.6
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 4.7e-133 478.8 444 55.0
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 5.2e-132 475.3 453 54.3
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 9.8e-131 471.1 487 52.4
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.2e-130 469.9 337 69.4
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 2.9e-130 469.5 470 52.6
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 5.2e-124 448.7 362 61.6
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 6.8e-124 448.4 380 59.2
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 2.8e-117 426.4 461 50.1
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 3.5e-112 409.5 467 50.7
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 6.6e-111 405.2 234 85.0
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 1.9e-110 403.7 321 64.2
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 2.8e-109 399.8 479 48.0
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 1.7e-106 390.6 413 50.6
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 4.2e-105 386.0 352 55.1
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 4.2e-105 386.0 352 55.1
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 4.3e-102 375.9 478 43.5
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 9.6e-102 374.8 289 65.7
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 2.1e-96 357.1 463 44.1
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 2.2e-90 337.0 336 53.3
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 4.8e-85 319.3 258 60.9
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 4.2e-81 306.2 356 44.9
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 1.3e-79 301.2 436 44.5
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 3.3e-78 296.6 230 64.8
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 1.3e-77 294.7 505 37.2
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 4.4e-70 269.6 457 39.4
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 1.7e-66 257.7 348 42.5
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.7e-64 250.4 377 42.7
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 8.5e-58 228.8 299 42.8
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.7e-56 223.8 232 53.0
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 4.7e-56 223.0 224 54.5
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 1.5e-49 201.4 160 63.1
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 1.5e-49 201.4 160 63.1
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 2.1e-48 197.6 194 56.2
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 8.0e-48 195.7 173 56.1
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 3.0e-47 193.7 174 58.6
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 6.8e-39 166.0 464 28.7
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.4e-36 158.3 155 52.9
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 9.2e-36 155.6 100 75.0
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 1.6e-35 154.8 184 50.5
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 9.5e-33 145.6 146 51.4
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 6.8e-31 139.4 116 58.6
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 4.7e-24 116.7 239 33.1
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 7.8e-19 99.4 67 68.7
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 1.0e-18 99.0 106 54.7
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 4.1e-12 77.0 107 43.9
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 1.5e-09 68.6 90 42.2
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.5e-09 67.8 52 65.4
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 4.3e-09 67.0 52 65.4
HPP92_017762 Vanilla planifolia HOM05D005933 ORTHO05D431751 8.9e-07 59.3 97 41.2


User provided reference genes

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