Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0011673 Lotus japonicus HOM05D003885 ORTHO05D004623 4.7e-147 524.6 285 100.0
Lj4g0022976 Lotus japonicus HOM05D003885 ORTHO05D004623 1.3e-109 400.2 230 97.8
TPR.G2621 Trifolium pratense HOM05D003885 ORTHO05D004623 9.2e-103 377.5 230 89.1
Ca_21964_v3 Cicer arietinum L. HOM05D003885 ORTHO05D004623 2.8e-99 365.9 230 88.3
Psat0s1834g0040 Pisum sativum HOM05D003885 ORTHO05D004623 4.7e-99 365.2 230 87.8
VMungo0251G1810 Vigna mungo HOM05D003885 ORTHO05D004623 5.2e-98 361.7 230 89.1
Actinidia30379 Actinidia chinensis HOM05D003885 ORTHO05D004623 1.3e-96 357.1 230 85.7
Cfa016929 Carpinus fangiana HOM05D003885 ORTHO05D004623 1.7e-96 356.7 230 84.8
CSS0008032 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 3.7e-96 355.5 231 85.3
CSS0014433 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 3.7e-96 355.5 231 85.3
Haze_09860 Corylus avellana HOM05D003885 ORTHO05D004623 3.7e-96 355.5 230 84.3
Glyma.05G059200 Glycine max HOM05D003885 ORTHO05D004623 4.9e-96 355.1 231 89.2
Medtr4g100970 Medicago truncatula HOM05D003885 ORTHO05D004623 1.4e-95 353.6 230 85.7
Phvul.003G220300 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 2.1e-94 349.7 230 87.0
ClCG10G004480 Citrullus lanatus HOM05D003885 ORTHO05D004623 6.0e-94 348.2 231 86.6
TAR627G0008 Trochodendron aralioides HOM05D003885 ORTHO05D004623 6.0e-94 348.2 230 83.5
Glyma.17G141500 Glycine max HOM05D003885 ORTHO05D004623 7.8e-94 347.8 231 86.6
TAR629G2602 Trochodendron aralioides HOM05D003885 ORTHO05D004623 1.3e-93 347.1 230 83.5
Atru.chr2.3832 Acer truncatum HOM05D003885 ORTHO05D004623 1.7e-93 346.7 230 84.8
arahy.Tifrunner.gnm1.ann1.JC0UDE Arachis hypogaea HOM05D003885 ORTHO05D004623 5.0e-93 345.1 231 85.3
Nn1g07757 Nelumbo nucifera HOM05D003885 ORTHO05D004623 3.3e-92 342.4 230 84.3
Rhsim06G0232400 Rhododendron simsii HOM05D003885 ORTHO05D004623 9.5e-92 340.9 246 78.0
CANSAT56G2895 Cannabis sativa HOM05D003885 ORTHO05D004623 6.2e-91 338.2 230 81.7
TWI39G1241 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 6.2e-91 338.2 230 81.7
FAN14G2004 Fragaria x ananassa HOM05D003885 ORTHO05D004623 1.4e-90 337.0 233 83.3
Ciclev10009386m.g Citrus clementina HOM05D003885 ORTHO05D004623 1.8e-90 336.7 230 82.6
Ah.13g073470 Amaranthus hybridus HOM05D003885 ORTHO05D004623 2.3e-90 336.3 235 81.3
Lalb_Chr16g0386671 Lupinus albus HOM05D003885 ORTHO05D004623 2.3e-90 336.3 230 82.2
COL.COLO4_07729 Corchorus olitorius HOM05D003885 ORTHO05D004623 5.2e-90 335.1 230 81.3
Ah.06g181560 Amaranthus hybridus HOM05D003885 ORTHO05D004623 8.9e-90 334.3 233 81.1
Gorai.013G150700 Gossypium raimondii HOM05D003885 ORTHO05D004623 1.2e-89 334.0 232 82.3
QL08p003216 Quercus lobata HOM05D003885 ORTHO05D004623 1.2e-89 334.0 231 82.7
BolC3t16892H Brassica oleracea HOM05D003885 ORTHO05D004623 2.0e-89 333.2 267 73.0
Duzib213G0370 Durio zibethinus HOM05D003885 ORTHO05D004623 2.0e-89 333.2 230 81.7
Gohir.D13G134400 Gossypium hirsutum HOM05D003885 ORTHO05D004623 2.6e-89 332.8 231 82.3
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 3.4e-89 332.4 231 80.1
Gohir.A13G131100 Gossypium hirsutum HOM05D003885 ORTHO05D004623 3.4e-89 332.4 231 82.3
Potri.001G370366 Populus trichocarpa HOM05D003885 ORTHO05D004623 5.8e-89 331.6 231 81.0
Aa31LG8G410 Aethionema arabicum HOM05D003885 ORTHO05D004623 7.5e-89 331.3 231 80.1
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 1.3e-88 330.5 231 79.2
Thecc.07G008300 Theobroma cacao HOM05D003885 ORTHO05D004623 1.7e-88 330.1 230 82.6
Cc05_g15250 Coffea canephora HOM05D003885 ORTHO05D004623 2.9e-88 329.3 230 81.7
Lj1C893G21 Lonicera japonica HOM05D003885 ORTHO05D004623 3.7e-88 328.9 230 76.5
A03p38080 Brassica napus HOM05D003885 ORTHO05D004623 4.9e-88 328.6 232 80.2
BraA03t12961Z Brassica rapa HOM05D003885 ORTHO05D004623 4.9e-88 328.6 232 80.2
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 4.9e-88 328.6 232 80.2
AT3G13200 Arabidopsis thaliana HOM05D003885 ORTHO05D004623 6.4e-88 328.2 231 79.7
Manes.03G143400 Manihot esculenta HOM05D003885 ORTHO05D004623 6.4e-88 328.2 231 80.5
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 1.4e-87 327.0 232 79.7
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 1.4e-87 327.0 232 79.7
DCAR_019010 Daucus carota HOM05D003885 ORTHO05D004623 1.4e-87 327.0 230 80.4
MD03G1032500 Malus domestica HOM05D003885 ORTHO05D004623 1.4e-87 327.0 232 79.7
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 1.9e-87 326.6 232 80.2
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 3.2e-87 325.9 232 79.3
FvH4_6g22570 Fragaria vesca HOM05D003885 ORTHO05D004623 3.2e-87 325.9 233 82.0
FAN14G0574 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.2e-87 325.9 233 82.0
MD11G1036400 Malus domestica HOM05D003885 ORTHO05D004623 3.2e-87 325.9 232 79.3
Hund01874 Selenicereus undatus HOM05D003885 ORTHO05D004623 4.1e-87 325.5 232 80.6
Prupe.6G027200 Prunus persica HOM05D003885 ORTHO05D004623 5.4e-87 325.1 232 80.6
Hund01875 Selenicereus undatus HOM05D003885 ORTHO05D004623 5.4e-87 325.1 231 80.5
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 7.1e-87 324.7 233 79.4
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 7.1e-87 324.7 233 79.4
THA.LOC104822723 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 9.2e-87 324.3 231 80.1
RcHm_v2.0_Chr3g0480061 Rosa chinensis HOM05D003885 ORTHO05D004623 1.2e-86 323.9 234 81.2
CARHR087790 Cardamine hirsuta HOM05D003885 ORTHO05D004623 1.6e-86 323.6 231 78.4
EL10Ac4g07536 Beta vulgaris HOM05D003885 ORTHO05D004623 3.5e-86 322.4 243 77.0
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 3.5e-86 322.4 232 78.9
Aqoxy3G02916 Aquilegia oxysepala HOM05D003885 ORTHO05D004623 4.6e-86 322.0 234 81.2
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 4.6e-86 322.0 232 79.7
DCAR_003369 Daucus carota HOM05D003885 ORTHO05D004623 4.6e-86 322.0 230 80.4
PGR083G1050 Punica granatum HOM05D003885 ORTHO05D004623 4.6e-86 322.0 231 81.4
MELO3C014122.2 Cucumis melo HOM05D003885 ORTHO05D004623 6.0e-86 321.6 232 80.2
Os06g0106100 Oryza sativa ssp. japonica HOM05D003885 ORTHO05D004623 6.0e-86 321.6 232 77.6
CsaV3_3G004310 Cucumis sativus L. HOM05D003885 ORTHO05D004623 7.8e-86 321.2 231 81.0
FAN05G2176 Fragaria x ananassa HOM05D003885 ORTHO05D004623 7.8e-86 321.2 234 80.3
THA.LOC104815689 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 7.8e-86 321.2 235 79.6
Sed0004751 Sechium edule HOM05D003885 ORTHO05D004623 1.0e-85 320.9 231 82.3
Zm00001eb119790 Zea mays HOM05D003885 ORTHO05D004623 1.0e-85 320.9 233 77.7
A01p40350 Brassica napus HOM05D003885 ORTHO05D004623 1.3e-85 320.5 232 78.9
BraA01t04070Z Brassica rapa HOM05D003885 ORTHO05D004623 1.3e-85 320.5 232 78.9
FAN09G2902 Fragaria x ananassa HOM05D003885 ORTHO05D004623 6.6e-85 318.2 234 79.9
Lsat_1_v5_gn_5_188801 Lactuca sativa HOM05D003885 ORTHO05D004623 8.6e-85 317.8 232 78.9
Phvul.008G217400 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 8.6e-85 317.8 230 76.1
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 1.1e-84 317.4 230 77.8
THA.LOC104810295 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 1.9e-84 316.6 231 78.8
TWI38G2335 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 1.9e-84 316.6 230 77.8
Sed0017804 Sechium edule HOM05D003885 ORTHO05D004623 2.5e-84 316.2 231 78.8
HPP92_015188 Vanilla planifolia HOM05D003885 ORTHO05D004623 1.2e-83 313.9 235 77.0
ECA246G5298 Erigeron canadensis HOM05D003885 ORTHO05D004623 2.1e-83 313.2 230 79.6
Zm00001eb338740 Zea mays HOM05D003885 ORTHO05D004623 3.6e-83 312.4 232 75.9
Hma1.2p1_0193F.1_g083890 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 4.7e-83 312.0 284 63.4
PSO210G5551 Papaver somniferum HOM05D003885 ORTHO05D004623 8.1e-83 311.2 230 77.8
PSO210G1946 Papaver somniferum HOM05D003885 ORTHO05D004623 1.8e-82 310.1 230 77.8
ATR1153G045 Amborella trichopoda HOM05D003885 ORTHO05D004623 3.1e-82 309.3 233 78.1
vmacro11612 Vaccinium macrocarpon HOM05D003885 ORTHO05D004623 3.1e-82 309.3 230 70.9
Nitab4.5_0010643g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 4.0e-82 308.9 230 79.6
BcaC05g29203 Brassica carinata HOM05D003885 ORTHO05D004623 6.8e-82 308.1 232 76.7
Dinv40883 Davidia involucrata HOM05D003885 ORTHO05D004623 1.5e-81 307.0 230 72.2
Sopen07g033990 Solanum pennellii HOM05D003885 ORTHO05D004623 1.3e-80 303.9 230 76.5
CiPaw.12G140300 Carya illinoinensis HOM05D003885 ORTHO05D004623 1.7e-80 303.5 230 75.7
GSVIVG01014735001 Vitis vinifera HOM05D003885 ORTHO05D004623 2.4e-79 299.7 231 76.6
MBI11_g04749_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 3.2e-79 299.3 235 75.3
PGSC0003DMG400022160 Solanum tuberosum HOM05D003885 ORTHO05D004623 3.2e-79 299.3 237 75.1
Lalb_Chr05g0221281 Lupinus albus HOM05D003885 ORTHO05D004623 5.4e-79 298.5 230 74.3
PGSC0003DMG400008684 Solanum tuberosum HOM05D003885 ORTHO05D004623 2.1e-78 296.6 233 76.0
Eucgr.F02030 Eucalyptus grandis HOM05D003885 ORTHO05D004623 2.7e-78 296.2 232 75.0
MSTRG.14500 Avicennia marina HOM05D003885 ORTHO05D004623 6.0e-78 295.0 230 74.8
AUR62017134 Chenopodium quinoa HOM05D003885 ORTHO05D004623 3.9e-77 292.4 239 68.6
C03p46210 Brassica napus HOM05D003885 ORTHO05D004623 5.1e-77 292.0 232 75.4
Sabra16G0243800 Salix brachista HOM05D003885 ORTHO05D004623 6.6e-77 291.6 251 64.9
Sc03g0011570 Simmondsia chinensis HOM05D003885 ORTHO05D004623 1.1e-76 290.8 233 75.1
Nitab4.5_0005478g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 1.5e-76 290.4 233 69.5
Peaxi162Scf00139g01026 Petunia axillaris HOM05D003885 ORTHO05D004623 3.3e-76 289.3 230 68.3
Pp3c5_15120 Physcomitrium patens HOM05D003885 ORTHO05D004623 5.6e-76 288.5 234 72.2
CAN.G492.53 Capsicum annuum HOM05D003885 ORTHO05D004623 1.6e-75 287.0 231 74.0
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 1.6e-75 287.0 226 76.1
Solyc10g005800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 3.6e-75 285.8 234 73.5
Sopen10g001770 Solanum pennellii HOM05D003885 ORTHO05D004623 3.6e-75 285.8 234 73.5
AUR62035674 Chenopodium quinoa HOM05D003885 ORTHO05D004623 1.8e-74 283.5 233 67.0
Mapoly0072s0064 Marchantia polymorpha HOM05D003885 ORTHO05D004623 2.6e-73 279.6 233 73.0
Duzib170G0277 Durio zibethinus HOM05D003885 ORTHO05D004623 4.4e-73 278.9 230 70.4
MSTRG.13030 Avicennia marina HOM05D003885 ORTHO05D004623 3.8e-72 275.8 231 71.9
unitig_61.g26133 Utricularia gibba HOM05D003885 ORTHO05D004623 3.8e-72 275.8 232 71.1
FAN02G3468 Fragaria x ananassa HOM05D003885 ORTHO05D004623 4.9e-72 275.4 218 78.0
SalBow2G3065 Salvia bowleyana HOM05D003885 ORTHO05D004623 8.4e-72 274.6 230 66.1
AagrBONN_evm.TU.Sc2ySwM_228.690 Anthoceros agrestis HOM05D003885 ORTHO05D004623 3.2e-71 272.7 230 69.6
unitig_0.g990 Utricularia gibba HOM05D003885 ORTHO05D004623 3.0e-69 266.2 232 70.3
Lsat_1_v5_gn_5_2000 Lactuca sativa HOM05D003885 ORTHO05D004623 6.6e-69 265.0 271 61.3
SalBow2G0786 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.1e-68 264.2 230 69.6
SalBow2G3218 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.5e-68 263.8 230 69.1
SalBow8G3434 Salvia bowleyana HOM05D003885 ORTHO05D004623 5.6e-68 261.9 230 69.6
SalBow2G1425 Salvia bowleyana HOM05D003885 ORTHO05D004623 7.3e-68 261.5 230 69.1
Nitab4.5_0003328g0110 Nicotiana tabacum HOM05D003885 ORTHO05D004623 2.4e-66 256.5 233 69.1
CBR_g58788 Chara braunii HOM05D003885 ORTHO05D004623 5.3e-66 255.4 230 69.1
Migut.M01631 Erythranthe guttata HOM05D003885 ORTHO05D004623 7.6e-65 251.5 230 67.4
HanXRQChr08g0233271 Helianthus annuus HOM05D003885 ORTHO05D004623 8.4e-64 248.1 230 66.1
HanXRQChr05g0160321 Helianthus annuus HOM05D003885 ORTHO05D004623 3.2e-63 246.1 276 58.7
Actinidia10568 Actinidia chinensis HOM05D003885 ORTHO05D004623 6.2e-59 231.9 187 76.5
SHI27704 Sapria himalayana HOM05D003885 ORTHO05D004623 6.9e-58 228.4 189 73.5
TPR.G37597 Trifolium pratense HOM05D003885 ORTHO05D004623 4.2e-55 219.2 122 90.2
CSS0032461 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 5.5e-55 218.8 187 73.3
CSS0035354 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 9.3e-55 218.0 231 63.2
SMO356G0623 Selaginella moellendorffii HOM05D003885 ORTHO05D004623 4.6e-54 215.7 239 60.7
Nn1g07559 Nelumbo nucifera HOM05D003885 ORTHO05D004623 1.5e-52 210.7 156 79.5
Nitab4.5_0000152g0340 Nicotiana tabacum HOM05D003885 ORTHO05D004623 5.8e-49 198.7 254 50.8
Hma1.2p1_0133F.1_g061250 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 1.0e-48 198.0 121 81.8
SGA_v2.0_scaffold8G04417 Striga asiatica HOM05D003885 ORTHO05D004623 2.5e-47 193.4 155 76.1
MCO14G028 Micromonas commoda HOM05D003885 ORTHO05D004623 1.8e-45 187.2 235 55.3
CSS0021051 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 1.5e-44 184.1 121 76.0
Cre24.g755447 Chlamydomonas reinhardtii HOM05D003885 ORTHO05D004623 4.8e-43 179.1 242 51.2
SalBow2G0143 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.3e-40 171.0 113 77.9
Solyc07g065800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 1.3e-40 171.0 155 69.7
SalBow2G2880 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.7e-40 170.6 113 77.9
SalBow2G2704 Salvia bowleyana HOM05D003885 ORTHO05D004623 2.5e-39 166.8 113 76.1
Hma1.2p1_0133F.1_g061260 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 3.2e-39 166.4 97 89.7
arahy.Tifrunner.gnm1.ann1.BGFV7A Arachis hypogaea HOM05D003885 ORTHO05D004623 3.6e-38 162.9 93 91.4
RcHm_v2.0_Chr1g0318721 Rosa chinensis HOM05D003885 ORTHO05D004623 3.3e-36 156.4 123 69.1
BcaC01g04006 Brassica carinata HOM05D003885 ORTHO05D004623 5.7e-36 155.6 98 82.7
CAN.G1427.13 Capsicum annuum HOM05D000822 ORTHO05D004949 3.7e-35 152.9 175 60.6
TPR.G37600 Trifolium pratense HOM05D003885 ORTHO05D004623 2.7e-30 136.7 76 86.8
MBI19_g41323_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 6.1e-30 135.6 81 82.7
BcaB04g21002 Brassica carinata HOM05D003885 ORTHO05D004623 7.4e-28 128.6 90 75.6
C05p54720 Brassica napus HOM05D003885 ORTHO05D004623 1.5e-25 120.9 97 70.1
MCO14G027 Micromonas commoda HOM05D003885 ORTHO05D004623 7.7e-25 118.6 179 52.0
PRCOL_00003569 Prasinoderma coloniale HOM05D003885 ORTHO05D004623 1.7e-24 117.5 232 39.7
Zm00001eb157240 Zea mays HOM05D003885 ORTHO05D004623 7.2e-23 112.1 78 73.1
COL.COLO4_09698 Corchorus olitorius HOM05D003885 ORTHO05D004623 2.1e-22 110.5 145 52.4
SalBow8G5188 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.4e-21 107.8 185 41.1
RcHm_v2.0_Chr3g0468911 Rosa chinensis HOM05D003885 ORTHO05D004623 1.7e-19 100.9 227 36.1
PSO384G2596 Papaver somniferum HOM05D003885 ORTHO05D004623 1.7e-16 90.9 71 69.0
ATR0733G138 Amborella trichopoda HOM05D003885 ORTHO05D004623 5.0e-16 89.4 44 95.5
ATR0733G199 Amborella trichopoda HOM05D003885 ORTHO05D004623 5.0e-16 89.4 75 65.3
Lsat_1_v5_gn_8_106160 Lactuca sativa HOM05D003885 ORTHO05D004623 1.5e-15 87.8 57 75.4
CSS0001317 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 8.3e-11 72.0 89 51.7
Haze_27574 Corylus avellana HOM05D003885 ORTHO05D164292 8.3e-11 72.0 123 39.0
CSS0038981 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.5e-07 60.5 92 47.8


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