Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 1.1e-306 1055.8 559 100.0
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 1.1e-168 597.4 560 66.6
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 4.4e-165 585.5 557 64.8
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 4.5e-162 575.5 563 62.3
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 2.9e-161 572.8 559 63.0
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 7.7e-154 548.1 562 60.1
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 2.4e-139 500.0 440 61.8
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 1.4e-134 484.2 530 58.1
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 2.6e-133 479.9 448 62.9
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 3.4e-125 453.0 440 61.8
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 2.3e-110 403.7 554 50.2
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 5.2e-110 402.5 554 50.0
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 3.4e-109 399.8 557 47.9
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 1.2e-106 391.3 549 48.8
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 8.1e-103 378.6 556 46.2
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 7.6e-101 372.1 567 46.2
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 4.9e-100 369.4 560 45.0
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 6.4e-100 369.0 573 44.5
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 1.9e-99 367.5 560 45.0
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 7.1e-99 365.5 560 44.8
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 7.1e-99 365.5 557 41.5
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 9.2e-99 365.2 557 42.9
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 2.1e-98 364.0 459 47.1
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 6.0e-98 362.5 554 46.0
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 1.1e-96 358.2 545 46.2
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 2.5e-96 357.1 555 45.0
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 2.8e-95 353.6 568 45.2
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 2.8e-95 353.6 557 46.9
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 2.2e-92 344.0 550 43.5
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 3.8e-92 343.2 551 44.1
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 4.9e-92 342.8 559 43.6
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 1.1e-91 341.7 548 43.8
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 1.1e-91 341.7 550 43.5
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 2.4e-91 340.5 555 44.0
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 3.2e-91 340.1 480 44.4
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 3.2e-91 340.1 561 43.5
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 9.3e-91 338.6 555 42.9
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 3.5e-90 336.7 426 49.1
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 3.9e-89 333.2 549 42.4
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 3.9e-89 333.2 554 43.9
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 3.9e-89 333.2 565 41.8
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 1.9e-88 330.9 567 44.1
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 5.6e-88 329.3 574 42.2
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 2.8e-87 327.0 566 42.8
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 2.8e-87 327.0 590 43.4
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 3.1e-86 323.6 563 42.6
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 2.0e-85 320.9 556 41.2
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 2.6e-85 320.5 553 41.6
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 1.4e-83 314.7 556 43.0
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 2.4e-83 313.9 551 41.6
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 1.3e-81 308.1 548 42.5
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 1.1e-80 305.1 554 41.9
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 1.1e-78 298.5 558 42.1
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 1.4e-78 298.1 568 36.3
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 5.3e-78 296.2 559 39.9
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 5.3e-78 296.2 546 41.4
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 9.0e-78 295.4 426 41.5
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 1.5e-77 294.7 558 40.3
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 1.9e-75 287.7 580 39.3
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 1.9e-75 287.7 582 38.7
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 1.9e-75 287.7 554 37.9
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 2.1e-74 284.3 580 38.8
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 1.1e-72 278.5 555 42.7
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 1.1e-72 278.5 436 39.7
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 1.5e-72 278.1 558 39.1
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 1.6e-71 274.6 551 38.5
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 6.2e-71 272.7 418 41.1
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 6.2e-71 272.7 549 42.4
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 6.9e-70 269.2 342 43.9
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 3.4e-69 266.9 522 39.1
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 7.6e-69 265.8 488 36.3
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 3.8e-68 263.5 310 48.4
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 5.5e-67 259.6 592 39.9
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 1.8e-65 254.6 568 37.9
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 8.7e-65 252.3 588 37.4
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 1.5e-64 251.5 427 37.9
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 8.2e-63 245.7 423 37.6
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 1.4e-62 245.0 319 44.5
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 4.1e-62 243.4 557 36.4
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 4.1e-62 243.4 557 36.4
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.0e-60 238.8 551 36.3
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 1.3e-60 238.4 554 38.1
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 2.2e-60 237.7 386 45.3
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 3.8e-60 236.9 541 35.9
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 5.0e-60 236.5 556 31.5
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 3.7e-55 220.3 327 41.9
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 6.3e-55 219.5 554 35.0
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 4.5e-53 213.4 345 45.8
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 5.0e-52 209.9 256 50.8
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 2.6e-48 197.6 483 31.7
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.1e-46 192.2 551 33.6
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 4.1e-46 190.3 394 36.0
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 1.9e-43 181.4 324 43.5
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 8.0e-42 176.0 294 39.8
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 1.4e-41 175.3 490 27.3
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 4.8e-39 166.8 315 35.6
CARHR242710 Cardamine hirsuta HOM05D007081 ORTHO05D008834 1.7e-36 158.3 229 42.4
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 3.2e-35 154.1 356 37.6
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 4.2e-35 153.7 317 34.1
Cpa.g.sc35.79 Carica papaya HOM05D007081 ORTHO05D008834 7.0e-30 136.3 101 68.3
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 1.2e-26 125.6 403 28.3
SGA_v2.0_scaffold90G27873 Striga asiatica HOM05D007081 ORTHO05D008834 1.1e-22 112.5 194 37.1
HPP92_000304 Vanilla planifolia HOM05D007081 ORTHO05D008834 2.4e-22 111.3 98 59.2
arahy.Tifrunner.gnm1.ann1.JE9H0F Arachis hypogaea HOM05D007081 ORTHO05D008834 4.2e-19 100.5 367 28.1
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 9.5e-19 99.4 95 55.8
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 8.3e-15 86.3 157 35.0
CSS0035417 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 3.5e-13 80.9 63 63.5
SEGI_21151 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 2.5e-11 74.7 75 52.0
Nitab4.5_0022301g0010 Nicotiana tabacum HOM05D007081 ORTHO05D008834 3.4e-08 64.3 203 40.4
Nitab4.5_0002055g0100 Nicotiana tabacum HOM05D005384 ORTHO05D006477 3.7e-07 60.8 121 34.7
Nitab4.5_0009567g0040 Nicotiana tabacum HOM05D005384 ORTHO05D006477 4.9e-07 60.5 121 34.7
CAN.G572.37 Capsicum annuum HOM05D005384 ORTHO05D006477 8.3e-07 59.7 121 34.7
Solyc08g077310.3 Solanum lycopersicum HOM05D005384 ORTHO05D006477 8.3e-07 59.7 114 36.0
Sopen08g025890 Solanum pennellii HOM05D005384 ORTHO05D006477 8.3e-07 59.7 114 36.0
CAN.G12.29 Capsicum annuum HOM05D001989 ORTHO05D000346 1.1e-06 59.3 179 38.5
Aqoxy2G03702_Aqoxy2G03703 Aquilegia oxysepala HOM05D005384 ORTHO05D006477 1.9e-06 58.5 131 30.5
Aqoxy3G02532 Aquilegia oxysepala HOM05D005384 ORTHO05D006477 1.9e-06 58.5 131 30.5
Peaxi162Scf00084g00818 Petunia axillaris HOM05D005384 ORTHO05D006477 9.2e-06 56.2 120 34.2


User provided reference genes

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