Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1169G70 Lonicera japonica HOM05D001403 ORTHO05D001313 6.2e-17 89.7 46 100.0
Lj5A185T54 Lonicera japonica HOM05D001403 ORTHO05D001313 6.0e-12 73.2 43 88.4
Atru.chr5.3225 Acer truncatum HOM05D001403 ORTHO05D001313 2.3e-11 71.2 43 83.7
Haze_02199 Corylus avellana HOM05D001403 ORTHO05D001313 2.3e-11 71.2 43 83.7
GSVIVG01024086001 Vitis vinifera HOM05D001403 ORTHO05D001313 3.9e-11 70.5 43 81.4
Nn1g05899 Nelumbo nucifera HOM05D001403 ORTHO05D001313 5.1e-11 70.1 43 81.4
Actinidia27839 Actinidia chinensis HOM05D001403 ORTHO05D001313 6.6e-11 69.7 43 81.4
Ciclev10028924m.g Citrus clementina HOM05D001403 ORTHO05D001313 6.6e-11 69.7 43 81.4
Lj1g0005278 Lotus japonicus HOM05D001403 ORTHO05D001313 8.6e-11 69.3 43 79.1
VMungo1383G1778 Vigna mungo HOM05D001403 ORTHO05D001313 8.6e-11 69.3 43 81.4
CSS0001105 Camellia sinensis var. sinensis HOM05D001403 ORTHO05D001313 1.1e-10 68.9 43 81.4
CSS0046841 Camellia sinensis var. sinensis HOM05D001403 ORTHO05D001313 1.1e-10 68.9 43 81.4
PSO541G3545 Papaver somniferum HOM05D001403 ORTHO05D001313 1.1e-10 68.9 42 83.3
PSO675G6266 Papaver somniferum HOM05D001403 ORTHO05D001313 1.1e-10 68.9 42 83.3
MSTRG.5428 Avicennia marina HOM05D001403 ORTHO05D001313 1.5e-10 68.6 43 79.1
Dinv41976 Davidia involucrata HOM05D001403 ORTHO05D001313 1.5e-10 68.6 43 81.4
TAR376G1161 Trochodendron aralioides HOM05D001403 ORTHO05D001313 1.5e-10 68.6 43 76.7
arahy.Tifrunner.gnm1.ann1.1JKV8J Arachis hypogaea HOM05D001403 ORTHO05D001313 1.9e-10 68.2 43 79.1
Dinv04969 Davidia involucrata HOM05D001403 ORTHO05D001313 1.9e-10 68.2 43 79.1
Rhsim05G0063200 Rhododendron simsii HOM05D001403 ORTHO05D001313 1.9e-10 68.2 43 81.4
Rhsim11G0187700 Rhododendron simsii HOM05D001403 ORTHO05D001313 1.9e-10 68.2 43 76.7
TPR.G32799 Trifolium pratense HOM05D001403 ORTHO05D001313 1.9e-10 68.2 43 76.7
TWI79G0193 Tripterygium wilfordii HOM05D001403 ORTHO05D001313 1.9e-10 68.2 43 79.1
Glyma.19G186000 Glycine max HOM05D001403 ORTHO05D001313 2.5e-10 67.8 43 79.1
Nn5g30138 Nelumbo nucifera HOM05D001403 ORTHO05D001313 2.5e-10 67.8 43 76.7
Oeu046126.3 Olea europaea HOM05D001403 ORTHO05D001313 2.5e-10 67.8 43 79.1
Prupe.8G160500 Prunus persica HOM05D001403 ORTHO05D001313 2.5e-10 67.8 42 78.6
DCAR_003699 Daucus carota HOM05D001403 ORTHO05D001313 3.3e-10 67.4 43 79.1
Phvul.001G181000 Phaseolus vulgaris HOM05D001403 ORTHO05D001313 3.3e-10 67.4 43 79.1
TWI75G0899 Tripterygium wilfordii HOM05D001403 ORTHO05D001313 3.3e-10 67.4 43 76.7
TAR628G0668 Trochodendron aralioides HOM05D001403 ORTHO05D001313 3.3e-10 67.4 43 76.7
vmacro02248 Vaccinium macrocarpon HOM05D001403 ORTHO05D001313 3.3e-10 67.4 43 76.7
arahy.Tifrunner.gnm1.ann1.J1L191 Arachis hypogaea HOM05D001403 ORTHO05D001313 4.3e-10 67.0 43 76.7
CAN.G588.24 Capsicum annuum HOM05D001403 ORTHO05D001313 4.3e-10 67.0 43 74.4
Nitab4.5_0000980g0170 Nicotiana tabacum HOM05D001403 ORTHO05D001313 4.3e-10 67.0 43 74.4
Solyc01g111120.4 Solanum lycopersicum HOM05D001403 ORTHO05D001313 4.3e-10 67.0 43 74.4
Glyma.03G185800 Glycine max HOM05D001403 ORTHO05D001313 5.6e-10 66.6 43 76.7
Nitab4.5_0000956g0160 Nicotiana tabacum HOM05D001403 ORTHO05D001313 5.6e-10 66.6 43 74.4
Nitab4.5_0010816g0020 Nicotiana tabacum HOM05D001403 ORTHO05D001313 5.6e-10 66.6 43 74.4
Potri.009G129500 Populus trichocarpa HOM05D001403 ORTHO05D001313 5.6e-10 66.6 43 76.7
AUR62010098 Chenopodium quinoa HOM05D001403 ORTHO05D001313 7.3e-10 66.2 43 76.7
Glyma.13G146200 Glycine max HOM05D001403 ORTHO05D001313 7.3e-10 66.2 43 76.7
Nitab4.5_0000283g0100 Nicotiana tabacum HOM05D001403 ORTHO05D001313 7.3e-10 66.2 43 72.1
CANSAT25G0104 Cannabis sativa HOM05D001403 ORTHO05D001313 9.5e-10 65.9 43 74.4
Hund06403 Selenicereus undatus HOM05D001403 ORTHO05D001313 9.5e-10 65.9 43 76.7
Sopen01g053180 Solanum pennellii HOM05D001403 ORTHO05D001313 9.5e-10 65.9 43 72.1
PGSC0003DMG400001595 Solanum tuberosum HOM05D001403 ORTHO05D001313 9.5e-10 65.9 43 72.1
Actinidia32085 Actinidia chinensis HOM05D001403 ORTHO05D001313 1.2e-09 65.5 43 74.4
A09p58480 Brassica napus HOM05D001403 ORTHO05D001313 1.2e-09 65.5 42 78.6
BolC8t51741H Brassica oleracea HOM05D001403 ORTHO05D001313 1.2e-09 65.5 42 78.6
BraA09t41235Z Brassica rapa HOM05D001403 ORTHO05D001313 1.2e-09 65.5 42 78.6
Ca_26407_v3 Cicer arietinum L. HOM05D001403 ORTHO05D001313 1.2e-09 65.5 43 74.4
MBI05_g33716_MAGBIO Magnolia biondii HOM05D001403 ORTHO05D001313 1.2e-09 65.5 43 74.4
Sabra04G0112600 Salix brachista HOM05D001403 ORTHO05D001313 1.2e-09 65.5 43 69.8
Thhalv10000249m.g Eutrema salsugineum HOM05D001403 ORTHO05D001313 1.6e-09 65.1 42 78.6
Glyma.10G059500 Glycine max HOM05D001403 ORTHO05D001313 1.6e-09 65.1 43 74.4
Lalb_Chr20g0112521 Lupinus albus HOM05D001403 ORTHO05D001313 1.6e-09 65.1 43 74.4
Manes.11G089900 Manihot esculenta HOM05D001403 ORTHO05D001313 1.6e-09 65.1 43 74.4
Peaxi162Scf00538g00523 Petunia axillaris HOM05D001403 ORTHO05D001313 1.6e-09 65.1 43 74.4
Sp4g00320 Schrenkiella parvula HOM05D001403 ORTHO05D001313 1.6e-09 65.1 42 78.6
Solyc10g054870.3 Solanum lycopersicum HOM05D001403 ORTHO05D001313 1.6e-09 65.1 42 76.2
Sopen10g024790 Solanum pennellii HOM05D001403 ORTHO05D001313 1.6e-09 65.1 42 76.2
PGSC0003DMG400004436 Solanum tuberosum HOM05D001403 ORTHO05D001313 1.6e-09 65.1 42 76.2
HanXRQChr17g0556391 Helianthus annuus HOM05D001403 ORTHO05D001313 2.1e-09 64.7 43 76.7
QL11p047522 Quercus lobata HOM05D001403 ORTHO05D001313 2.1e-09 64.7 42 73.8
Eucgr.I01374 Eucalyptus grandis HOM05D001403 ORTHO05D001313 2.8e-09 64.3 43 76.7
AL4G10260 Arabidopsis lyrata HOM05D001403 ORTHO05D001313 3.6e-09 63.9 42 76.2
Duzib132G0941 Durio zibethinus HOM05D001403 ORTHO05D001313 3.6e-09 63.9 43 72.1
MD05G1115700 Malus domestica HOM05D001403 ORTHO05D001313 3.6e-09 63.9 42 73.8
Manes.04G078300 Manihot esculenta HOM05D001403 ORTHO05D001313 3.6e-09 63.9 43 74.4
Oeu020689.3 Olea europaea HOM05D001403 ORTHO05D001313 3.6e-09 63.9 43 72.1
Potri.004G168000 Populus trichocarpa HOM05D001403 ORTHO05D001313 3.6e-09 63.9 43 69.8
Aa31LG7G15520 Aethionema arabicum HOM05D001403 ORTHO05D001313 4.7e-09 63.5 42 73.8
AT2G21170 Arabidopsis thaliana HOM05D001403 ORTHO05D001313 4.7e-09 63.5 42 73.8
Carub.0004s0019 Capsella rubella HOM05D001403 ORTHO05D001313 4.7e-09 63.5 42 73.8
Migut.B00166 Erythranthe guttata HOM05D001403 ORTHO05D001313 4.7e-09 63.5 43 74.4
FvH4_2g02030 Fragaria vesca HOM05D001403 ORTHO05D001313 4.7e-09 63.5 42 73.8
FAN15G2532 Fragaria x ananassa HOM05D001403 ORTHO05D001313 4.7e-09 63.5 42 73.8
FAN20G2773 Fragaria x ananassa HOM05D001403 ORTHO05D001313 4.7e-09 63.5 42 73.8
FAN24G1473 Fragaria x ananassa HOM05D001403 ORTHO05D001313 4.7e-09 63.5 42 73.8
FAN27G1589 Fragaria x ananassa HOM05D001403 ORTHO05D001313 4.7e-09 63.5 42 73.8
Gohir.D01G155700 Gossypium hirsutum HOM05D001403 ORTHO05D001313 4.7e-09 63.5 43 69.8
RcHm_v2.0_Chr6g0245261 Rosa chinensis HOM05D001403 ORTHO05D001313 4.7e-09 63.5 42 73.8
Sabra09G0099000 Salix brachista HOM05D001403 ORTHO05D001313 4.7e-09 63.5 43 74.4
THA.LOC104824776 Tarenaya hassleriana HOM05D001403 ORTHO05D001313 4.7e-09 63.5 43 72.1
EL10Ac9g21443 Beta vulgaris HOM05D001403 ORTHO05D001313 6.2e-09 63.2 43 69.8
CiPaw.05G077100 Carya illinoinensis HOM05D001403 ORTHO05D001313 6.2e-09 63.2 42 73.8
Cc02_g16530 Coffea canephora HOM05D001403 ORTHO05D001313 6.2e-09 63.2 43 67.4
Peaxi162Scf00362g01044 Petunia axillaris HOM05D001403 ORTHO05D001313 6.2e-09 63.2 42 73.8
PGR142G4237 Punica granatum HOM05D001403 ORTHO05D001313 6.2e-09 63.2 43 72.1
BcaC07g41171 Brassica carinata HOM05D001403 ORTHO05D001313 8.1e-09 62.8 42 76.2
A04p15940 Brassica napus HOM05D001403 ORTHO05D001313 8.1e-09 62.8 42 73.8
C08p41780 Brassica napus HOM05D001403 ORTHO05D001313 8.1e-09 62.8 42 76.2
BraA04t17227Z Brassica rapa HOM05D001403 ORTHO05D001313 8.1e-09 62.8 42 73.8
HanXRQChr13g0389071 Helianthus annuus HOM05D001403 ORTHO05D001313 8.1e-09 62.8 43 74.4
Medtr7g103020 Medicago truncatula HOM05D001403 ORTHO05D001313 8.1e-09 62.8 42 71.4
THA.LOC104804100 Tarenaya hassleriana HOM05D001403 ORTHO05D001313 8.1e-09 62.8 43 72.1
CARHR112020 Cardamine hirsuta HOM05D001403 ORTHO05D001313 1.1e-08 62.4 42 71.4
Duzib052G0414 Durio zibethinus HOM05D001403 ORTHO05D001313 1.1e-08 62.4 43 69.8
ECA233G4928 Erigeron canadensis HOM05D001403 ORTHO05D001313 1.1e-08 62.4 43 72.1
Gohir.A01G163600 Gossypium hirsutum HOM05D001403 ORTHO05D001313 1.1e-08 62.4 42 69.0
Psat3g040800 Pisum sativum HOM05D001403 ORTHO05D001313 1.1e-08 62.4 42 69.0
unitig_21.g20804 Utricularia gibba HOM05D001403 ORTHO05D001313 1.1e-08 62.4 43 69.8
BcaB06g29646 Brassica carinata HOM05D001403 ORTHO05D001313 1.4e-08 62.0 42 73.8
BcaB08g34967 Brassica carinata HOM05D001403 ORTHO05D001313 1.4e-08 62.0 42 73.8
C04p50400 Brassica napus HOM05D001403 ORTHO05D001313 1.4e-08 62.0 42 73.8
COL.COLO4_17255 Corchorus olitorius HOM05D001403 ORTHO05D001313 1.4e-08 62.0 43 69.8
CsaV3_2G015690 Cucumis sativus L. HOM05D001403 ORTHO05D001313 1.4e-08 62.0 43 72.1
SalBow3G3299 Salvia bowleyana HOM05D001403 ORTHO05D001313 1.4e-08 62.0 43 69.8
ClCG02G011400 Citrullus lanatus HOM05D001403 ORTHO05D001313 2.4e-08 61.2 43 72.1
Lsat_1_v5_gn_8_125881 Lactuca sativa HOM05D001403 ORTHO05D001313 2.4e-08 61.2 43 72.1
SGA_v2.0_scaffold32G13234 Striga asiatica HOM05D001403 ORTHO05D001313 2.4e-08 61.2 44 72.7
Thecc.02G067100 Theobroma cacao HOM05D001403 ORTHO05D001313 2.4e-08 61.2 43 67.4
Zm00001eb103580 Zea mays HOM05D001403 ORTHO05D001313 2.4e-08 61.2 43 67.4
Ah.01g009200 Amaranthus hybridus HOM05D001403 ORTHO05D001313 3.1e-08 60.8 43 69.8
MELO3C020780.2 Cucumis melo HOM05D001403 ORTHO05D001313 3.1e-08 60.8 43 69.8
Gohir.A04G123100 Gossypium hirsutum HOM05D001403 ORTHO05D001313 3.1e-08 60.8 43 69.8
MD10G1118200 Malus domestica HOM05D001403 ORTHO05D001313 3.1e-08 60.8 42 71.4
Zm00001eb319770 Zea mays HOM05D001403 ORTHO05D001313 3.1e-08 60.8 43 65.1
BolC4t26638H Brassica oleracea HOM05D001403 ORTHO05D001313 4.0e-08 60.5 42 71.4
Sed0004870 Sechium edule HOM05D001403 ORTHO05D001313 5.2e-08 60.1 43 67.4
Sc18g0006660 Simmondsia chinensis HOM05D001403 ORTHO05D001313 5.2e-08 60.1 43 65.1
HPP92_027728 Vanilla planifolia HOM05D001403 ORTHO05D001313 5.2e-08 60.1 43 69.8
Gorai.002G192900 Gossypium raimondii HOM05D001403 ORTHO05D001313 8.9e-08 59.3 53 58.5
Gorai.012G153600 Gossypium raimondii HOM05D001403 ORTHO05D001313 1.2e-07 58.9 43 67.4
Gohir.D04G165150 Gossypium hirsutum HOM05D001403 ORTHO05D001313 1.5e-07 58.5 42 69.0
SEGI_18068 Sequoiadendron giganteum HOM05D001403 ORTHO05D001313 1.5e-07 58.5 43 67.4
CDE05G3181 Ceratophyllum demersum HOM05D001403 ORTHO05D001313 3.4e-07 57.4 43 65.1
Sed0000953 Sechium edule HOM05D001403 ORTHO05D001313 3.4e-07 57.4 43 65.1
CBR_g271 Chara braunii HOM05D001403 ORTHO05D001313 4.4e-07 57.0 43 62.8
Pp3c11_9120 Physcomitrium patens HOM05D001403 ORTHO05D001313 1.3e-06 55.5 43 62.8
CDE05G1618 Ceratophyllum demersum HOM05D001403 ORTHO05D001313 2.2e-06 54.7 43 60.5
Mapoly0007s0011 Marchantia polymorpha HOM05D001403 ORTHO05D001313 2.9e-06 54.3 43 58.1
Pp3c16_11330 Physcomitrium patens HOM05D001403 ORTHO05D001313 2.9e-06 54.3 43 62.8
AagrBONN_evm.TU.Sc2ySwM_362.659 Anthoceros agrestis HOM05D001403 ORTHO05D001313 6.4e-06 53.1 43 55.8
SMO304G0115 Selaginella moellendorffii HOM05D001403 ORTHO05D001313 6.4e-06 53.1 42 59.5
Mapoly0007s0110 Marchantia polymorpha HOM05D001403 ORTHO05D001313 8.4e-06 52.8 43 55.8
SHI05683 Sapria himalayana HOM05D001403 ORTHO05D001313 8.4e-06 52.8 43 58.1


User provided reference genes

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