Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr24g0394281 Lupinus albus HOM05D003625 ORTHO05D004382 2.7e-112 408.7 210 100.0
Lalb_Chr22g0350011 Lupinus albus HOM05D003625 ORTHO05D004382 6.4e-61 238.0 147 80.3
VMungo1080G0322 Vigna mungo HOM05D003625 ORTHO05D004382 1.1e-39 167.5 167 55.7
Lj3g0001853 Lotus japonicus HOM05D003625 ORTHO05D004382 7.6e-38 161.4 173 54.3
Glyma.15G042000 Glycine max HOM05D003625 ORTHO05D004382 1.3e-37 160.6 168 54.8
arahy.Tifrunner.gnm1.ann1.6HBC95 Arachis hypogaea HOM05D003625 ORTHO05D004382 3.5e-35 152.5 167 51.5
arahy.Tifrunner.gnm1.ann1.E19P6N Arachis hypogaea HOM05D003625 ORTHO05D004382 3.5e-35 152.5 167 51.5
CiPaw.13G100200 Carya illinoinensis HOM05D003625 ORTHO05D004382 5.1e-34 148.7 172 50.0
Phvul.L001843 Phaseolus vulgaris HOM05D003625 ORTHO05D004382 3.3e-33 146.0 144 54.2
QL01p033546 Quercus lobata HOM05D003625 ORTHO05D004382 3.3e-33 146.0 175 48.6
arahy.Tifrunner.gnm1.ann1.DI3WFZ Arachis hypogaea HOM05D003625 ORTHO05D004382 4.3e-33 145.6 173 48.0
Manes.03G013700 Manihot esculenta HOM05D003625 ORTHO05D004382 7.4e-33 144.8 153 54.2
arahy.Tifrunner.gnm1.ann1.AN8C0D Arachis hypogaea HOM05D003625 ORTHO05D004382 1.3e-32 144.1 173 48.0
Ca_01349_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 2.1e-32 143.3 143 55.9
Ca_01352_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 2.8e-32 142.9 143 55.9
Duzib213G0855 Durio zibethinus HOM05D003625 ORTHO05D004382 3.7e-32 142.5 178 47.8
Thecc.07G010400 Theobroma cacao HOM05D003625 ORTHO05D004382 4.8e-32 142.1 179 47.5
Haze_24022 Corylus avellana HOM05D003625 ORTHO05D004382 1.4e-31 140.6 203 45.3
Glyma.13G332300 Glycine max HOM05D003625 ORTHO05D004382 1.4e-31 140.6 150 53.3
Gohir.A04G004900 Gossypium hirsutum HOM05D003625 ORTHO05D004382 4.1e-31 139.0 179 45.3
Gorai.009G451700 Gossypium raimondii HOM05D003625 ORTHO05D004382 5.3e-31 138.7 179 45.3
Sabra14G0102100 Salix brachista HOM05D003625 ORTHO05D004382 1.2e-30 137.5 181 43.1
Gohir.D05G385000 Gossypium hirsutum HOM05D003625 ORTHO05D004382 1.5e-30 137.1 176 47.2
COL.COLO4_09853 Corchorus olitorius HOM05D003625 ORTHO05D004382 2.0e-30 136.7 178 46.1
GSVIVG01011024001 Vitis vinifera HOM05D003625 ORTHO05D004382 2.6e-30 136.3 147 55.1
Ciclev10018730m.g Citrus clementina HOM05D003625 ORTHO05D004382 4.5e-30 135.6 177 45.2
Ca_19197_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 5.8e-30 135.2 147 51.7
TPR.G34304 Trifolium pratense HOM05D003625 ORTHO05D004382 5.8e-30 135.2 145 54.5
Lalb_Chr01g0003851 Lupinus albus HOM05D003625 ORTHO05D004382 7.6e-30 134.8 174 47.7
Atru.chr5.1298 Acer truncatum HOM05D003625 ORTHO05D004382 1.3e-29 134.0 179 47.5
Dinv32982 Davidia involucrata HOM05D003625 ORTHO05D004382 3.8e-29 132.5 183 44.8
Duzib268G0343 Durio zibethinus HOM05D003625 ORTHO05D004382 3.8e-29 132.5 172 45.3
Medtr4g063030 Medicago truncatula HOM05D003625 ORTHO05D004382 3.8e-29 132.5 144 51.4
TWI59G0316 Tripterygium wilfordii HOM05D003625 ORTHO05D004382 3.8e-29 132.5 178 43.8
Cpa.g.sc60.39 Carica papaya HOM05D003625 ORTHO05D004382 5.0e-29 132.1 182 44.5
Medtr2g096290 Medicago truncatula HOM05D003625 ORTHO05D004382 5.0e-29 132.1 144 50.7
Prupe.8G267900 Prunus persica HOM05D003625 ORTHO05D004382 2.5e-28 129.8 179 45.3
Nitab4.5_0010231g0010 Nicotiana tabacum HOM05D003625 ORTHO05D004382 4.2e-28 129.0 182 44.0
MD02G1277900 Malus domestica HOM05D003625 ORTHO05D004382 9.3e-28 127.9 179 44.7
Lj3g0005082 Lotus japonicus HOM05D003625 ORTHO05D004382 1.6e-27 127.1 144 53.5
Psat7g219280 Pisum sativum HOM05D003625 ORTHO05D004382 1.6e-27 127.1 147 50.3
Prupe.8G250800 Prunus persica HOM05D003625 ORTHO05D004382 1.6e-27 127.1 179 45.3
Psat5g282480 Pisum sativum HOM05D003625 ORTHO05D004382 2.7e-27 126.3 140 53.6
Potri.014G135700 Populus trichocarpa HOM05D003625 ORTHO05D004382 2.7e-27 126.3 177 44.1
CAN.G426.9 Capsicum annuum HOM05D003625 ORTHO05D004382 4.6e-27 125.6 161 46.6
Nitab4.5_0001651g0100 Nicotiana tabacum HOM05D003625 ORTHO05D004382 6.1e-27 125.2 176 44.9
CsaV3_1G033940 Cucumis sativus L. HOM05D003625 ORTHO05D004382 7.9e-27 124.8 177 44.6
CANSAT25G1777 Cannabis sativa HOM05D003625 ORTHO05D004382 1.0e-26 124.4 171 43.9
Cfa011439 Carpinus fangiana HOM05D003625 ORTHO05D004382 3.0e-26 122.9 168 45.8
DCAR_005834 Daucus carota HOM05D003625 ORTHO05D004382 3.0e-26 122.9 176 45.5
TPR.G1039 Trifolium pratense HOM05D003625 ORTHO05D004382 1.1e-25 120.9 147 48.3
Haze_04796 Corylus avellana HOM05D003625 ORTHO05D004382 1.9e-25 120.2 170 44.7
Hma1.2p1_0209F.1_g089230 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 1.9e-25 120.2 181 40.3
Solyc09g074330.3 Solanum lycopersicum HOM05D003625 ORTHO05D004382 2.5e-25 119.8 178 43.8
Sopen09g029170 Solanum pennellii HOM05D003625 ORTHO05D004382 2.5e-25 119.8 178 43.8
PGR044G2464 Punica granatum HOM05D003625 ORTHO05D004382 4.3e-25 119.0 151 45.7
QL93p2003_0013 Quercus lobata HOM05D003625 ORTHO05D004382 7.4e-25 118.2 179 40.2
Cfa006055 Carpinus fangiana HOM05D003625 ORTHO05D006197 9.7e-25 117.9 172 45.9
SHI14627 Sapria himalayana HOM05D003625 ORTHO05D004382 9.7e-25 117.9 176 41.5
QL12p023448 Quercus lobata HOM05D003625 ORTHO05D004382 1.6e-24 117.1 179 39.7
RcHm_v2.0_Chr6g0292351 Rosa chinensis HOM05D003625 ORTHO05D004382 1.6e-24 117.1 175 42.3
CSS0005803 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 4.8e-24 115.5 186 41.9
Lj2A1183G17 Lonicera japonica HOM05D003625 ORTHO05D004382 8.2e-24 114.8 188 38.8
Eucgr.C03805 Eucalyptus grandis HOM05D003625 ORTHO05D004382 2.4e-23 113.2 175 40.0
CiPaw.08G101000 Carya illinoinensis HOM05D003625 ORTHO05D004382 4.1e-23 112.5 137 44.5
HanXRQChr05g0150041 Helianthus annuus HOM05D003625 ORTHO05D004382 5.3e-23 112.1 146 45.2
MELO3C020662.2 Cucumis melo HOM05D003625 ORTHO05D004382 9.0e-23 111.3 164 43.9
HanXRQChr06g0164001 Helianthus annuus HOM05D003625 ORTHO05D004382 9.0e-23 111.3 151 47.7
MBI19_g35956_MAGBIO Magnolia biondii HOM05D003625 ORTHO05D004382 1.2e-22 110.9 151 43.0
DCAR_002782 Daucus carota HOM05D003625 ORTHO05D004382 2.6e-22 109.8 175 43.4
TAR365G1186 Trochodendron aralioides HOM05D003625 ORTHO05D004382 4.5e-22 109.0 191 37.7
Aqoxy2G00575 Aquilegia oxysepala HOM05D003625 ORTHO05D004382 7.7e-22 108.2 186 39.2
MELO3C022916.2 Cucumis melo HOM05D003625 ORTHO05D004382 1.3e-21 107.5 179 41.9
SalBow3G1663 Salvia bowleyana HOM05D003625 ORTHO05D004382 2.9e-21 106.3 89 56.2
ECA236G1413 Erigeron canadensis HOM05D003625 ORTHO05D004382 3.8e-21 105.9 153 46.4
FvH4_2g24490 Fragaria vesca HOM05D003625 ORTHO05D004382 8.5e-21 104.8 98 53.1
FAN15G0592 Fragaria x ananassa HOM05D003625 ORTHO05D004382 8.5e-21 104.8 98 53.1
FAN20G2140 Fragaria x ananassa HOM05D003625 ORTHO05D004382 8.5e-21 104.8 98 53.1
FAN24G2516 Fragaria x ananassa HOM05D003625 ORTHO05D004382 8.5e-21 104.8 98 53.1
SGA_v2.0_scaffold1G00428 Striga asiatica HOM05D003625 ORTHO05D004382 1.1e-20 104.4 133 42.9
FAN27G0529 Fragaria x ananassa HOM05D003625 ORTHO05D004382 4.2e-20 102.4 98 52.0
EL10Ac7g17149 Beta vulgaris HOM05D003625 ORTHO05D004382 9.4e-20 101.3 183 37.7
AUR62028969 Chenopodium quinoa HOM05D003625 ORTHO05D004382 3.6e-19 99.4 186 33.9
Oeu022807.1 Olea europaea HOM05D003625 ORTHO05D004382 3.6e-19 99.4 86 52.3
Cc01_g20080 Coffea canephora HOM05D003625 ORTHO05D004382 6.1e-19 98.6 158 39.9
Hma1.2p1_0358F.1_g134800 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 6.1e-19 98.6 130 42.3
CDE11G0573 Ceratophyllum demersum HOM05D003625 ORTHO05D004382 7.9e-19 98.2 187 33.7
ATR0626G050 Amborella trichopoda HOM05D003625 ORTHO05D004382 1.8e-18 97.1 144 35.4
THA.LOC104801203 Tarenaya hassleriana HOM05D003625 ORTHO05D004382 2.3e-18 96.7 156 40.4
AUR62034443 Chenopodium quinoa HOM05D003625 ORTHO05D004382 5.1e-18 95.5 186 33.3
Dinv11285 Davidia involucrata HOM05D003625 ORTHO05D004382 5.1e-18 95.5 118 48.3
Sc17g0003680 Simmondsia chinensis HOM05D003625 ORTHO05D004382 5.1e-18 95.5 181 35.4
MSTRG.18201 Avicennia marina HOM05D003625 ORTHO05D004382 8.8e-18 94.7 82 50.0
PSO407G0030 Papaver somniferum HOM05D003625 ORTHO05D004382 1.1e-17 94.4 84 51.2
Lsat_1_v5_gn_5_189721 Lactuca sativa HOM05D003625 ORTHO05D004382 2.5e-17 93.2 156 37.2
CDE05G3415 Ceratophyllum demersum HOM05D003625 ORTHO05D004382 3.3e-17 92.8 183 32.8
Sp6g03120 Schrenkiella parvula HOM05D003625 ORTHO05D004382 5.7e-17 92.0 157 37.6
unitig_0.g1186 Utricularia gibba HOM05D003625 ORTHO05D004382 5.7e-17 92.0 156 37.2
BcaB01g01983 Brassica carinata HOM05D003625 ORTHO05D004382 1.3e-16 90.9 149 38.9
C09p02500 Brassica napus HOM05D003625 ORTHO05D004382 1.3e-16 90.9 150 38.7
BolC9t53180H Brassica oleracea HOM05D003625 ORTHO05D004382 1.3e-16 90.9 149 38.9
PSO170G6480 Papaver somniferum HOM05D003625 ORTHO05D004382 1.7e-16 90.5 84 51.2
Thhalv10028409m.g Eutrema salsugineum HOM05D003625 ORTHO05D004382 2.8e-16 89.7 157 38.2
A09p02400 Brassica napus HOM05D003625 ORTHO05D004382 3.7e-16 89.4 151 38.4
BraA09t35887Z Brassica rapa HOM05D003625 ORTHO05D004382 3.7e-16 89.4 151 38.4
BcaB01g01939 Brassica carinata HOM05D003625 ORTHO05D004382 4.8e-16 89.0 151 39.1
AL6G49860 Arabidopsis lyrata HOM05D003625 ORTHO05D004382 6.3e-16 88.6 162 38.3
CARHR251510 Cardamine hirsuta HOM05D003625 ORTHO05D004382 1.4e-15 87.4 169 36.7
Pp3c15_10800 Physcomitrium patens HOM05D003625 ORTHO05D004382 2.6e-14 83.2 179 33.5
AT4G03090 Arabidopsis thaliana HOM05D003625 ORTHO05D004382 3.4e-14 82.8 158 36.7
Carub.0006s3397 Capsella rubella HOM05D003625 ORTHO05D004382 4.5e-14 82.4 176 37.5
Mapoly0033s0004 Marchantia polymorpha HOM05D003625 ORTHO05D004382 1.3e-13 80.9 86 43.0
Aa31LG5G2610 Aethionema arabicum HOM05D003625 ORTHO05D004382 1.9e-12 77.0 163 35.0
Pp3c9_3000 Physcomitrium patens HOM05D003625 ORTHO05D004382 1.9e-12 77.0 178 31.5
Ah.04g162700 Amaranthus hybridus HOM05D003625 ORTHO05D004382 7.2e-12 75.1 174 33.9
AagrBONN_evm.TU.Sc2ySwM_228.4764 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.2e-11 74.3 82 39.0
Zm00001eb115510 Zea mays HOM05D003625 ORTHO05D004382 1.6e-11 73.9 83 47.0
Duzib170G0264 Durio zibethinus HOM05D003625 ORTHO05D004382 2.8e-08 63.2 123 39.0
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 8.2e-08 61.6 151 32.5
Peaxi162Scf00006g03621 Petunia axillaris HOM05D003625 ORTHO05D004382 3.1e-07 59.7 130 36.9
SMO271G0139 Selaginella moellendorffii HOM05D003625 ORTHO05D004382 7.0e-07 58.5 150 34.0
vmacro02517 Vaccinium macrocarpon HOM05D003625 ORTHO05D004382 1.2e-06 57.8 162 31.5


User provided reference genes

Program Settings