Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0274191 Lupinus albus HOM05D000580 ORTHO05D006815 1.1e-29 132.5 62 100.0
Gohir.A12G228900 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.2e-10 69.3 38 84.2
Eucgr.F03245 Eucalyptus grandis HOM05D000580 ORTHO05D006815 3.4e-10 67.8 38 86.8
Gohir.A09G103100 Gossypium hirsutum HOM05D000580 ORTHO05D006815 3.4e-10 67.8 38 84.2
Nn049s41914 Nelumbo nucifera HOM05D000580 ORTHO05D006815 4.4e-10 67.4 38 84.2
Psat0s1446g0280 Pisum sativum HOM05D000580 ORTHO05D001785 4.4e-10 67.4 38 84.2
Psat6g181560 Pisum sativum HOM05D000580 ORTHO05D001785 4.4e-10 67.4 38 84.2
Psat0s7142g0160 Pisum sativum HOM05D000580 ORTHO05D001785 5.8e-10 67.0 54 64.8
Peaxi162Scf00527g00037 Petunia axillaris HOM05D000580 ORTHO05D006815 7.5e-10 66.6 56 66.1
Gohir.A03G093700 Gossypium hirsutum HOM05D000580 ORTHO05D006815 9.8e-10 66.2 38 81.6
Gohir.D02G096801 Gossypium hirsutum HOM05D000580 ORTHO05D006815 9.8e-10 66.2 44 75.0
Potri.011G074901 Populus trichocarpa HOM05D000580 ORTHO05D006815 9.8e-10 66.2 38 84.2
Potri.011G113742 Populus trichocarpa HOM05D000580 ORTHO05D006815 9.8e-10 66.2 38 84.2
Potri.019G028200 Populus trichocarpa HOM05D000580 ORTHO05D006815 9.8e-10 66.2 38 84.2
SabraPtG0004100 Salix brachista HOM05D000580 ORTHO05D001785 9.8e-10 66.2 38 84.2
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 1.3e-09 65.9 38 81.6
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 1.3e-09 65.9 38 81.6
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 1.3e-09 65.9 38 81.6
Duzib252G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 1.3e-09 65.9 38 81.6
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 1.3e-09 65.9 38 81.6
Gohir.1Z049866 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.3e-09 65.9 38 81.6
Gohir.1Z078601 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.3e-09 65.9 38 81.6
Gohir.A09G043800 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.3e-09 65.9 38 81.6
Gohir.A10G070250 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.3e-09 65.9 38 81.6
Gohir.D01G102060 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.3e-09 65.9 38 81.6
Gorai.010G031500 Gossypium raimondii HOM05D000580 ORTHO05D006815 1.3e-09 65.9 38 81.6
Lalb_Chr10g0093221 Lupinus albus HOM05D000580 ORTHO05D006815 1.3e-09 65.9 38 84.2
Lalb_Chr25g0283341 Lupinus albus HOM05D000580 ORTHO05D006815 1.3e-09 65.9 38 84.2
PGR111G0073 Punica granatum HOM05D000580 ORTHO05D006815 1.3e-09 65.9 38 84.2
Medtr4g051375 Medicago truncatula HOM05D000580 ORTHO05D006815 2.2e-09 65.1 53 64.2
Gohir.A13G110000 Gossypium hirsutum HOM05D000580 ORTHO05D006815 2.9e-09 64.7 39 79.5
Medtr2g062930 Medicago truncatula HOM05D000580 ORTHO05D006815 2.9e-09 64.7 38 81.6
Solyc00g500026.1 Solanum lycopersicum HOM05D000580 ORTHO05D006815 2.9e-09 64.7 54 64.8
Solyc00g500072.1 Solanum lycopersicum HOM05D000580 ORTHO05D006815 2.9e-09 64.7 54 64.8
Solyc11g006675.1 Solanum lycopersicum HOM05D000580 ORTHO05D006815 3.7e-09 64.3 43 72.1
CAN.G1513.10 Capsicum annuum HOM05D000580 ORTHO05D006815 4.9e-09 63.9 38 78.9
CAN.G219.32 Capsicum annuum HOM05D000580 ORTHO05D006815 4.9e-09 63.9 38 78.9
Psat7g045200 Pisum sativum HOM05D000580 ORTHO05D006815 4.9e-09 63.9 38 81.6
SabraMtG0010300 Salix brachista HOM05D000580 ORTHO05D006815 4.9e-09 63.9 37 83.8
Gohir.A12G178620 Gossypium hirsutum HOM05D000580 ORTHO05D006815 6.4e-09 63.5 38 78.9
Gohir.A12G178630 Gossypium hirsutum HOM05D000580 ORTHO05D006815 6.4e-09 63.5 38 78.9
Gohir.A12G178665 Gossypium hirsutum HOM05D000580 ORTHO05D006815 6.4e-09 63.5 38 78.9
Gorai.005G110300 Gossypium raimondii HOM05D000580 ORTHO05D006815 6.4e-09 63.5 44 72.7
Peaxi162Scf00299g10016 Petunia axillaris HOM05D000580 ORTHO05D006815 6.4e-09 63.5 38 81.6
CSS0026029 Camellia sinensis var. sinensis HOM05D000580 ORTHO05D006815 8.3e-09 63.2 38 78.9
ClCG02G007580 Citrullus lanatus HOM05D000580 ORTHO05D006815 8.3e-09 63.2 55 61.8
Gohir.A01G128325 Gossypium hirsutum HOM05D000580 ORTHO05D006815 8.3e-09 63.2 32 87.5
QL93p1043_0018 Quercus lobata HOM05D000580 ORTHO05D001785 8.3e-09 63.2 32 93.8
CAN.G131.5 Capsicum annuum HOM05D000580 ORTHO05D006815 1.1e-08 62.8 38 76.3
Gohir.A02G100500 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.1e-08 62.8 38 78.9
CAN.G1595.6 Capsicum annuum HOM05D000580 ORTHO05D006815 1.4e-08 62.4 38 76.3
Glyma.05G092100 Glycine max HOM05D000580 ORTHO05D006815 1.4e-08 62.4 38 78.9
Gohir.D04G149675 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.9e-08 62.0 38 73.7
PSO548G0006 Papaver somniferum HOM05D000580 ORTHO05D006815 1.9e-08 62.0 38 81.6
CAN.G129.14 Capsicum annuum HOM05D000580 ORTHO05D006815 2.4e-08 61.6 38 76.3
Gohir.A05G301450 Gossypium hirsutum HOM05D000580 ORTHO05D006815 2.4e-08 61.6 38 76.3
Glyma.17G186400 Glycine max HOM05D000580 ORTHO05D006815 3.2e-08 61.2 38 76.3
CiPaw.10G124800 Carya illinoinensis HOM05D000580 ORTHO05D006815 4.1e-08 60.8 38 78.9
Gohir.D02G147200 Gossypium hirsutum HOM05D000580 ORTHO05D006815 4.1e-08 60.8 38 78.9
HanXRQChr02g0052541 Helianthus annuus HOM05D000580 ORTHO05D001785 4.1e-08 60.8 53 60.4
HanXRQChr02g0052691 Helianthus annuus HOM05D000580 ORTHO05D006815 4.1e-08 60.8 39 74.4
Sed0004233 Sechium edule HOM05D000580 ORTHO05D006815 5.4e-08 60.5 38 78.9
Sed0008111 Sechium edule HOM05D000580 ORTHO05D006815 5.4e-08 60.5 38 78.9
Sed0015899 Sechium edule HOM05D000580 ORTHO05D006815 5.4e-08 60.5 38 78.9
Migut.H01967 Erythranthe guttata HOM05D000580 ORTHO05D006815 1.6e-07 58.9 38 76.3
HanXRQChr01g0020261 Helianthus annuus HOM05D000580 ORTHO05D001785 1.6e-07 58.9 38 73.7
HanXRQChr05g0139711 Helianthus annuus HOM05D000580 ORTHO05D006815 1.6e-07 58.9 38 73.7
HanXRQChr05g0152611 Helianthus annuus HOM05D000580 ORTHO05D006815 1.6e-07 58.9 38 73.7
HanXRQChr07g0193501 Helianthus annuus HOM05D000580 ORTHO05D006815 1.6e-07 58.9 38 73.7
HanXRQChr08g0223961 Helianthus annuus HOM05D000580 ORTHO05D006815 1.6e-07 58.9 38 73.7
HanXRQChr10g0283641 Helianthus annuus HOM05D000580 ORTHO05D006815 1.6e-07 58.9 38 73.7
HanXRQChr10g0284331 Helianthus annuus HOM05D000580 ORTHO05D006815 1.6e-07 58.9 38 73.7
HanXRQChr10g0318111 Helianthus annuus HOM05D000580 ORTHO05D006815 1.6e-07 58.9 38 73.7
HanXRQChr11g0341921 Helianthus annuus HOM05D000580 ORTHO05D006815 1.6e-07 58.9 38 73.7
HanXRQChr14g0459311 Helianthus annuus HOM05D000580 ORTHO05D006815 1.6e-07 58.9 38 73.7
HanXRQCPg0580131 Helianthus annuus HOM05D000580 ORTHO05D006815 1.6e-07 58.9 38 73.7
Gorai.008G286600 Gossypium raimondii HOM05D000580 ORTHO05D006815 2.1e-07 58.5 38 71.1
HanXRQChr10g0299321 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-07 58.5 53 58.5
HanXRQChr11g0326921 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-07 58.5 53 58.5
Ah.10g027190 Amaranthus hybridus HOM05D000580 ORTHO05D001785 2.7e-07 58.2 60 53.3
Ah.10g027480 Amaranthus hybridus HOM05D000580 ORTHO05D001785 2.7e-07 58.2 60 53.3
AL2G20610 Arabidopsis lyrata HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
AL2G21660 Arabidopsis lyrata HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
ATCG00710 Arabidopsis thaliana HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BNapus_Darmor_BZH_scaffold_253p00300 Brassica napus HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BNapus_Darmor_BZH_scaffold_57p00040 Brassica napus HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
C06p23100 Brassica napus HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BolC2t08916H Brassica oleracea HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BolSC29t60484H Brassica oleracea HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BolSC29t60604H Brassica oleracea HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BolSC35t60664H Brassica oleracea HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BolSC35t60735H Brassica oleracea HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BolSC46t61015H Brassica oleracea HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BolSC47t61080H Brassica oleracea HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BolSC49t61168H Brassica oleracea HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BraA06t25380Z Brassica rapa HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BraSC138t45558Z Brassica rapa HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BraSC58t46498Z Brassica rapa HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
BraSC59t46576Z Brassica rapa HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
Carub.0006s2561 Capsella rubella HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
CARHR282200 Cardamine hirsuta HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
Nitab4.5_0010531g0030 Nicotiana tabacum HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
Sc07g0006580 Simmondsia chinensis HOM05D000580 ORTHO05D006815 2.7e-07 58.2 38 76.3
HanXRQChr04g0094321 Helianthus annuus HOM05D000580 ORTHO05D006815 3.5e-07 57.8 38 73.7
CAN.G1478.5 Capsicum annuum HOM05D000580 ORTHO05D006815 4.6e-07 57.4 30 86.7
Gorai.005G164900 Gossypium raimondii HOM05D000580 ORTHO05D006815 4.6e-07 57.4 38 73.7
SGA_v2.0_scaffold479G52254 Striga asiatica HOM05D000580 ORTHO05D006815 4.6e-07 57.4 38 73.7
BolSC46t61022H Brassica oleracea HOM05D000580 ORTHO05D006815 6.0e-07 57.0 36 77.8
Eucgr.B01572 Eucalyptus grandis HOM05D000580 ORTHO05D006815 6.0e-07 57.0 33 81.8
Nitab4.5_0004376g0090 Nicotiana tabacum HOM05D000580 ORTHO05D006815 6.0e-07 57.0 52 61.5
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 7.8e-07 56.6 60 51.7
Gohir.A05G326916 Gossypium hirsutum HOM05D000580 ORTHO05D006815 7.8e-07 56.6 32 84.4
HanXRQChr02g0038651 Helianthus annuus HOM05D000580 ORTHO05D006815 7.8e-07 56.6 38 68.4
Hma1.2p1_0218F.1_g092720 Hydrangea macrophylla HOM05D000580 ORTHO05D006815 7.8e-07 56.6 38 73.7
Hma1.2p1_2223F.1_g317406 Hydrangea macrophylla HOM05D000580 ORTHO05D006815 7.8e-07 56.6 38 73.7
Potri.002G174001 Populus trichocarpa HOM05D000580 ORTHO05D006815 7.8e-07 56.6 42 69.0
Lsat_1_v5_gn_5_50340 Lactuca sativa HOM05D000580 ORTHO05D006815 1.0e-06 56.2 38 73.7
CAN.G29.17 Capsicum annuum HOM05D000580 ORTHO05D006815 1.3e-06 55.8 38 71.1
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 1.3e-06 55.8 38 73.7
LjContig00319g0006223 Lotus japonicus HOM05D000580 ORTHO05D006815 1.3e-06 55.8 38 73.7
LjContig00319g0024255 Lotus japonicus HOM05D000580 ORTHO05D006815 1.3e-06 55.8 38 73.7
Hund29679 Selenicereus undatus HOM05D000580 ORTHO05D006815 1.3e-06 55.8 38 73.7
CAN.G2018.9 Capsicum annuum HOM05D000580 ORTHO05D006815 1.7e-06 55.5 38 76.3
CARHR292710 Cardamine hirsuta HOM05D000580 ORTHO05D006815 1.7e-06 55.5 38 73.7
Lsat_1_v5_gn_5_67060 Lactuca sativa HOM05D000580 ORTHO05D006815 1.7e-06 55.5 38 71.1
RcHm_v2.0_CPg0501961 Rosa chinensis HOM05D000580 ORTHO05D006815 1.7e-06 55.5 39 74.4
Gohir.A05G286600 Gossypium hirsutum HOM05D000580 ORTHO05D006815 2.3e-06 55.1 36 75.0
Gohir.D09G103600 Gossypium hirsutum HOM05D000580 ORTHO05D006815 2.3e-06 55.1 38 68.4
HanXRQChr11g0345231 Helianthus annuus HOM05D000580 ORTHO05D006815 2.3e-06 55.1 38 68.4
Lalb_Chr23g0274371 Lupinus albus HOM05D000580 ORTHO05D006815 3.0e-06 54.7 38 68.4
C07p15330 Brassica napus HOM05D000580 ORTHO05D006815 3.9e-06 54.3 38 68.4
Glyma.03G065000 Glycine max HOM05D000580 ORTHO05D006815 5.1e-06 53.9 32 78.1
C06p22890 Brassica napus HOM05D000580 ORTHO05D006815 6.6e-06 53.5 31 83.9
Hma1.2p1_0149F.1_g066500 Hydrangea macrophylla HOM05D000580 ORTHO05D006815 8.6e-06 53.1 38 63.2
Sed0008946 Sechium edule HOM05D000580 ORTHO05D006815 8.6e-06 53.1 29 89.7


User provided reference genes

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