Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 3.1e-87 325.1 165 100.0
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 1.6e-70 269.6 153 88.9
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 1.2e-67 260.0 153 86.3
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 2.1e-67 259.2 153 85.6
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 4.7e-67 258.1 153 85.0
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 6.1e-67 257.7 153 84.3
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 1.8e-66 256.1 153 83.7
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 2.3e-66 255.8 153 85.6
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 5.2e-66 254.6 153 83.7
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 2.2e-64 249.2 153 81.0
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 6.4e-64 247.7 153 80.4
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 9.2e-63 243.8 153 79.7
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 1.6e-62 243.0 154 79.9
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 2.0e-62 242.7 153 78.4
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 2.0e-62 242.7 153 79.1
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 4.6e-62 241.5 154 79.2
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 4.6e-62 241.5 158 74.7
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 5.9e-62 241.1 139 85.6
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 5.9e-62 241.1 153 79.1
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 7.8e-62 240.7 153 77.1
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 1.0e-61 240.4 153 78.4
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 1.0e-61 240.4 153 78.4
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 1.7e-61 239.6 153 76.5
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 1.7e-61 239.6 153 77.1
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 2.3e-61 239.2 153 77.8
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 2.3e-61 239.2 153 79.7
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 3.0e-61 238.8 153 77.8
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 3.0e-61 238.8 153 77.8
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 3.9e-61 238.4 153 76.5
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 3.9e-61 238.4 146 80.1
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 3.9e-61 238.4 153 76.5
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 5.0e-61 238.0 153 77.8
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 5.0e-61 238.0 153 77.8
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 5.0e-61 238.0 153 77.8
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 5.0e-61 238.0 146 82.2
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 6.6e-61 237.7 153 76.5
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 8.6e-61 237.3 153 77.1
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 8.6e-61 237.3 153 77.1
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 8.6e-61 237.3 146 82.2
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 8.6e-61 237.3 153 78.4
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 1.5e-60 236.5 153 78.4
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 1.9e-60 236.1 146 80.1
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 1.9e-60 236.1 153 77.8
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 1.9e-60 236.1 153 78.4
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 2.5e-60 235.7 153 77.1
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 2.5e-60 235.7 153 76.5
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 2.5e-60 235.7 153 75.8
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 3.3e-60 235.3 153 75.2
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 3.3e-60 235.3 153 77.8
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 4.3e-60 235.0 146 79.5
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 4.3e-60 235.0 153 76.5
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 5.6e-60 234.6 153 76.5
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 5.6e-60 234.6 153 77.8
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 1.6e-59 233.0 153 75.8
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 2.1e-59 232.6 153 75.2
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 2.1e-59 232.6 153 76.5
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 2.8e-59 232.3 153 75.8
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 2.8e-59 232.3 146 78.8
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 2.8e-59 232.3 153 76.5
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 3.6e-59 231.9 145 78.6
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 3.6e-59 231.9 159 73.0
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 3.6e-59 231.9 146 78.1
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 6.2e-59 231.1 146 78.1
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 8.0e-59 230.7 153 75.8
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 8.0e-59 230.7 159 73.0
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 1.8e-58 229.6 148 76.4
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 1.8e-58 229.6 153 75.8
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 4.0e-58 228.4 145 77.9
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 5.2e-58 228.0 153 75.2
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 1.2e-57 226.9 146 77.4
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 1.5e-57 226.5 146 76.7
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 1.5e-57 226.5 159 71.7
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 1.5e-57 226.5 153 74.5
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 2.0e-57 226.1 153 73.9
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 3.4e-57 225.3 153 74.5
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 3.4e-57 225.3 153 74.5
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 4.4e-57 224.9 153 73.9
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 7.5e-57 224.2 153 74.5
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 1.3e-56 223.4 146 76.0
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 1.7e-56 223.0 153 74.5
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 2.2e-56 222.6 153 72.5
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 2.2e-56 222.6 153 74.5
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 2.9e-56 222.2 153 73.2
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 3.7e-56 221.9 153 73.2
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 6.4e-56 221.1 153 71.9
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 8.3e-56 220.7 153 73.9
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 8.3e-56 220.7 153 73.9
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 8.3e-56 220.7 153 73.9
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 8.3e-56 220.7 153 73.9
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 1.1e-55 220.3 153 73.9
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 1.1e-55 220.3 153 69.9
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 1.9e-55 219.5 153 73.2
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 1.2e-54 216.9 146 72.6
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 4.6e-54 214.9 147 74.1
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 6.0e-54 214.5 153 71.2
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 1.7e-53 213.0 155 68.4
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 2.2e-48 196.1 146 71.2
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 1.9e-47 193.0 146 62.3
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 2.4e-47 192.6 169 62.1
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 1.2e-46 190.3 146 63.7
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 8.6e-45 184.1 146 61.0
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 1.8e-42 176.4 153 62.7
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 4.1e-39 165.2 107 75.7
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 3.0e-37 159.1 147 55.8
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 7.6e-33 144.4 121 67.8
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 3.8e-32 142.1 113 61.9
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 4.2e-31 138.7 151 47.0
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 1.3e-29 133.7 76 84.2
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 1.1e-26 124.0 81 76.5
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 3.1e-26 122.5 146 40.4
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 4.0e-26 122.1 143 51.7
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 5.3e-26 121.7 110 62.7
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 2.4e-23 112.8 82 69.5
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 3.2e-23 112.5 150 46.7
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 1.5e-20 103.6 155 40.0
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 9.3e-15 84.3 60 68.3
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 1.7e-08 63.5 61 60.7
BolC8t51460H Brassica oleracea HOM05D005598 ORTHO05D041141 5.5e-07 58.5 42 71.4
Lsat_1_v5_gn_5_43780 Lactuca sativa HOM05D005598 ORTHO05D008354 7.1e-07 58.2 46 56.5
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 9.3e-07 57.8 52 61.5
Lsat_1_v5_gn_3_11781 Lactuca sativa HOM05D000104 ORTHO05D008354 4.6e-06 55.5 54 53.7


User provided reference genes

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