Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 9.3e-59 229.9 112 100.0
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 2.8e-15 85.5 54 79.6
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 3.7e-15 85.1 66 66.7
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 3.7e-15 85.1 54 79.6
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 3.7e-15 85.1 62 67.7
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 3.7e-15 85.1 54 75.9
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 8.2e-15 84.0 58 74.1
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 1.1e-14 83.6 54 72.2
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 1.1e-14 83.6 54 74.1
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 1.1e-14 83.6 54 74.1
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 1.4e-14 83.2 54 77.8
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 1.4e-14 83.2 54 72.2
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 2.4e-14 82.4 54 75.9
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 2.4e-14 82.4 55 72.7
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 3.1e-14 82.0 54 77.8
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 4.1e-14 81.6 54 75.9
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 5.3e-14 81.3 55 74.5
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 5.3e-14 81.3 54 75.9
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 5.3e-14 81.3 54 75.9
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 7.0e-14 80.9 54 74.1
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 7.0e-14 80.9 54 75.9
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 7.0e-14 80.9 54 75.9
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 7.0e-14 80.9 56 75.0
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 1.2e-13 80.1 54 74.1
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 1.2e-13 80.1 54 72.2
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 1.6e-13 79.7 54 74.1
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 1.6e-13 79.7 54 72.2
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 1.6e-13 79.7 51 72.5
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 2.0e-13 79.3 54 70.4
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 2.7e-13 79.0 54 75.9
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 3.5e-13 78.6 54 74.1
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 3.5e-13 78.6 54 72.2
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 3.5e-13 78.6 54 74.1
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 4.5e-13 78.2 54 75.9
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 4.5e-13 78.2 46 80.4
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 5.9e-13 77.8 46 80.4
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 5.9e-13 77.8 46 80.4
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 5.9e-13 77.8 54 68.5
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 5.9e-13 77.8 46 80.4
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 5.9e-13 77.8 46 80.4
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 7.7e-13 77.4 54 72.2
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 7.7e-13 77.4 46 78.3
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 7.7e-13 77.4 54 72.2
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 7.7e-13 77.4 54 72.2
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 1.0e-12 77.0 54 72.2
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 1.0e-12 77.0 54 72.2
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 1.0e-12 77.0 54 68.5
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 1.0e-12 77.0 54 72.2
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 1.3e-12 76.6 54 70.4
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 1.3e-12 76.6 56 69.6
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 1.3e-12 76.6 54 72.2
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 1.7e-12 76.3 54 70.4
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 1.7e-12 76.3 46 78.3
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 1.7e-12 76.3 46 78.3
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 1.7e-12 76.3 54 68.5
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 2.2e-12 75.9 54 72.2
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 2.2e-12 75.9 54 70.4
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 2.9e-12 75.5 74 56.8
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 3.8e-12 75.1 54 70.4
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 3.8e-12 75.1 46 73.9
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 5.0e-12 74.7 56 67.9
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 5.0e-12 74.7 54 70.4
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 6.5e-12 74.3 46 71.7
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 6.5e-12 74.3 46 71.7
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 8.5e-12 73.9 46 76.1
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 8.5e-12 73.9 54 68.5
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 1.5e-11 73.2 51 66.7
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 1.5e-11 73.2 54 68.5
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 1.5e-11 73.2 62 64.5
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 2.5e-11 72.4 54 68.5
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 3.2e-11 72.0 51 64.7
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 3.2e-11 72.0 55 67.3
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 3.2e-11 72.0 46 76.1
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 4.2e-11 71.6 59 61.0
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 4.2e-11 71.6 46 69.6
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 5.5e-11 71.2 55 63.6
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 7.2e-11 70.9 46 67.4
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 7.2e-11 70.9 46 69.6
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 9.4e-11 70.5 45 73.3
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 9.4e-11 70.5 54 63.0
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 9.4e-11 70.5 46 69.6
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 1.2e-10 70.1 45 73.3
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 1.2e-10 70.1 45 73.3
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 1.2e-10 70.1 45 73.3
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 1.2e-10 70.1 45 73.3
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 1.2e-10 70.1 45 73.3
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 1.2e-10 70.1 45 73.3
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 1.6e-10 69.7 45 73.3
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 2.1e-10 69.3 46 69.6
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 2.7e-10 68.9 54 61.1
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 2.7e-10 68.9 46 67.4
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 2.7e-10 68.9 45 71.1
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 3.6e-10 68.6 45 71.1
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 3.6e-10 68.6 50 70.0
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 3.6e-10 68.6 46 67.4
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 4.7e-10 68.2 45 68.9
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 6.1e-10 67.8 46 67.4
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 8.0e-10 67.4 50 66.0
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 8.0e-10 67.4 46 65.2
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 1.4e-09 66.6 51 62.7
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 6.8e-09 64.3 51 56.9
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 1.3e-07 60.1 38 78.9
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 2.8e-07 58.9 36 80.6
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 3.1e-06 55.5 45 53.3


User provided reference genes

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