Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 2614.7 1322 100.0
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 2097.0 1331 78.8
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 2096.6 1328 78.8
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 2060.0 1329 78.3
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 2046.2 1324 78.2
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 2039.2 1333 77.3
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 2030.4 1333 77.2
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1969.9 1257 78.8
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1963.0 1326 74.5
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1777.7 1135 78.5
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1777.7 1324 67.3
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1765.4 1327 66.6
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1764.2 1329 66.8
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1760.0 1329 66.8
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1743.4 1329 66.4
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1740.7 1325 65.9
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1736.9 1332 66.2
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1730.3 1321 65.9
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1724.9 1329 65.4
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1721.4 1329 65.4
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1720.7 1329 65.3
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1720.7 1327 65.3
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1719.5 1329 65.3
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1713.4 1331 65.7
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1711.8 1334 65.3
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1711.8 1327 65.6
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1709.5 1329 65.9
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1709.1 1332 65.5
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1709.1 1329 64.9
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1706.4 1332 65.5
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1704.9 1236 69.7
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1697.6 1332 64.6
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1693.3 1330 64.4
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1686.4 1332 64.3
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1684.1 1331 64.2
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1672.1 1336 63.7
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1665.2 1327 63.7
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1660.6 1327 63.1
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1659.8 1242 66.7
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1658.3 1323 63.6
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1635.9 1242 66.4
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1635.9 1257 65.2
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1634.8 1254 65.1
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1630.9 1326 62.6
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1628.2 1323 62.2
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1625.5 1336 61.8
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1623.2 1329 62.4
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1622.8 1329 62.2
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1618.6 1330 62.1
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1608.2 1356 61.0
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1604.0 1338 60.9
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1603.2 1325 61.9
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1600.5 1332 60.9
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1596.6 1326 61.3
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1593.2 1336 60.9
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1590.5 1242 64.2
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1588.5 1332 60.0
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1576.2 1334 60.6
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1574.7 1332 60.7
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1573.1 1341 60.9
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1571.6 1343 59.9
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1569.3 1328 59.6
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1564.3 1257 62.6
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1557.0 1328 61.0
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1556.6 1322 60.7
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1550.8 1346 60.7
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1533.5 1094 70.7
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1530.8 1334 59.1
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1530.8 1334 59.1
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1526.9 1334 59.4
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1526.9 1330 59.2
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1523.5 1334 59.0
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1522.3 1099 68.8
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1519.2 1331 59.4
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1518.4 1334 58.9
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1516.9 1334 59.0
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1516.5 1330 59.3
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1509.6 1338 58.6
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1493.4 1327 57.3
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1492.6 1330 58.0
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1479.2 1204 62.1
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1473.0 1367 56.4
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1465.3 1328 57.2
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1450.3 1326 57.4
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1427.9 1323 56.5
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1416.4 1092 65.2
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1415.2 1107 63.7
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1404.4 1286 58.3
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1381.3 1335 53.6
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1367.4 1323 53.6
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1364.7 1148 61.0
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1352.4 1564 49.0
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1263.1 1350 50.1
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1260.7 1330 53.2
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1260.7 1323 51.3
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1210.7 948 63.8
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1147.1 1338 49.0
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 0.0e+00 1137.5 906 62.0
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1120.5 864 65.9
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1084.7 1262 46.4
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 2.3e-297 1026.2 756 68.3
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 5.2e-249 865.5 1364 39.0
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 3.0e-233 813.1 1325 38.5
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 2.4e-230 803.5 863 48.9
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 1.7e-223 780.8 1167 39.0
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 2.9e-220 770.0 1161 39.3
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 7.8e-205 718.8 772 51.0
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 1.6e-154 551.6 1494 29.6
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 8.2e-154 549.3 380 70.8
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 3.2e-134 484.2 357 70.6
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 2.3e-132 478.0 460 56.3
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 3.3e-102 377.9 315 61.6
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 1.2e-88 332.8 1361 26.9
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 1.1e-76 293.1 261 61.7
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 1.8e-76 292.4 255 54.5
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 4.0e-76 291.2 231 63.2
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 2.9e-74 285.0 224 63.8
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 3.8e-66 258.1 715 30.8
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 2.4e-65 255.4 196 70.9
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 1.7e-63 249.2 1253 24.7
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 5.3e-52 211.1 167 69.5
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 3.4e-51 208.4 167 68.9
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 3.5e-48 198.4 287 49.1
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.1e-46 193.4 132 77.3
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 1.0e-39 170.2 1359 23.3
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 1.3e-26 126.7 136 50.7


User provided reference genes

Program Settings