Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0392411 Lupinus albus HOM05D004873 ORTHO05D006122 0.0e+00 1180.6 770 100.0
Lalb_Chr05g0228131 Lupinus albus HOM05D004873 ORTHO05D006122 4.4e-277 958.0 773 84.7
arahy.Tifrunner.gnm1.ann1.QGK7DH Arachis hypogaea HOM05D004873 ORTHO05D006122 4.2e-251 871.7 804 77.6
arahy.Tifrunner.gnm1.ann1.SJZ9IC Arachis hypogaea HOM05D004873 ORTHO05D006122 5.5e-251 871.3 781 79.1
Psat2g106600 Pisum sativum HOM05D004873 ORTHO05D006122 8.5e-236 820.8 777 74.0
Ca_04600_v3 Cicer arietinum L. HOM05D004873 ORTHO05D006122 1.5e-227 793.5 774 69.0
Glyma.01G031400 Glycine max HOM05D004873 ORTHO05D006122 2.7e-226 789.3 773 73.2
TPR.G13590 Trifolium pratense HOM05D004873 ORTHO05D006122 2.0e-224 783.1 794 68.9
Medtr5g034430 Medicago truncatula HOM05D004873 ORTHO05D006122 8.0e-218 761.1 775 69.0
Glyma.02G034300 Glycine max HOM05D004873 ORTHO05D006122 4.4e-216 755.4 773 70.4
Phvul.002G071900 Phaseolus vulgaris HOM05D004873 ORTHO05D006122 3.8e-212 742.3 773 71.4
Lj2g0008447 Lotus japonicus HOM05D004873 ORTHO05D006122 2.4e-206 723.0 774 70.5
VMungo1215G2983 Vigna mungo HOM05D004873 ORTHO05D006122 3.5e-205 719.2 773 70.4
Ciclev10030647m.g Citrus clementina HOM05D004873 ORTHO05D006122 1.2e-194 684.1 777 65.6
Atru.chr11.2013 Acer truncatum HOM05D004873 ORTHO05D006122 6.1e-194 681.8 775 64.0
Haze_12170 Corylus avellana HOM05D004873 ORTHO05D006122 8.9e-193 677.9 781 66.3
Duzib251G0436 Durio zibethinus HOM05D004873 ORTHO05D006122 9.5e-187 657.9 778 62.2
CiPaw.05G150500 Carya illinoinensis HOM05D004873 ORTHO05D006122 4.4e-184 649.0 778 63.8
Lalb_Chr05g0216921 Lupinus albus HOM05D004873 ORTHO05D006122 1.7e-183 647.1 734 59.1
RcHm_v2.0_Chr4g0443951 Rosa chinensis HOM05D004873 ORTHO05D006122 3.2e-182 642.9 779 62.1
Manes.13G031000 Manihot esculenta HOM05D004873 ORTHO05D006122 3.3e-179 632.9 779 61.6
Duzib248G0479 Durio zibethinus HOM05D004873 ORTHO05D006122 1.2e-178 630.9 780 61.0
Cfa009139 Carpinus fangiana HOM05D004873 ORTHO05D006122 8.1e-178 628.2 748 64.0
QL03p061438 Quercus lobata HOM05D004873 ORTHO05D006122 8.1e-178 628.2 774 64.0
Sed0006362 Sechium edule HOM05D004873 ORTHO05D006122 4.4e-176 622.5 748 63.1
Potri.008G147100 Populus trichocarpa HOM05D004873 ORTHO05D006122 4.1e-174 615.9 783 60.4
Dinv24864 Davidia involucrata HOM05D004873 ORTHO05D006122 7.1e-174 615.1 784 59.7
MD13G1091200 Malus domestica HOM05D004873 ORTHO05D006122 9.2e-174 614.8 777 60.4
TWI18G0605 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 1.6e-173 614.0 779 63.5
ClCG05G025280 Citrullus lanatus HOM05D004873 ORTHO05D006122 2.7e-173 613.2 749 65.0
MD16G1091700 Malus domestica HOM05D004873 ORTHO05D006122 3.9e-172 609.4 776 62.6
Eucgr.B03347 Eucalyptus grandis HOM05D004873 ORTHO05D006122 4.3e-171 605.9 784 61.2
COL.COLO4_36971 Corchorus olitorius HOM05D004873 ORTHO05D006122 5.6e-171 605.5 779 53.0
GSVIVG01020233001 Vitis vinifera HOM05D004873 ORTHO05D006122 1.6e-170 604.0 784 59.2
Sabra10G0067000 Salix brachista HOM05D004873 ORTHO05D006122 2.1e-170 603.6 790 62.8
Nn4g22808 Nelumbo nucifera HOM05D004873 ORTHO05D006122 4.7e-170 602.4 777 58.0
Prupe.1G254700 Prunus persica HOM05D004873 ORTHO05D006122 8.9e-169 598.2 777 62.2
FAN07G2437 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.5e-168 597.4 778 59.5
Hma1.2p1_0160F.1_g070740 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 3.8e-167 592.8 790 58.0
TWI36G0907 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 8.4e-167 591.7 779 64.6
MELO3C012001.2 Cucumis melo HOM05D004873 ORTHO05D006122 7.1e-166 588.6 776 61.6
FAN22G1569 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.6e-165 587.4 784 59.1
TWI75G0297 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 6.0e-165 585.5 786 63.5
CsaV3_5G031610 Cucumis sativus L. HOM05D004873 ORTHO05D006122 1.7e-164 583.9 749 62.2
MBI15_g36943_MAGBIO Magnolia biondii HOM05D004873 ORTHO05D006122 6.6e-164 582.0 785 61.1
CSS0025142 Camellia sinensis var. sinensis HOM05D004873 ORTHO05D006122 3.3e-163 579.7 791 58.9
TAR622G0484 Trochodendron aralioides HOM05D004873 ORTHO05D006122 2.4e-161 573.5 773 59.4
FvH4_4g34571 Fragaria vesca HOM05D004873 ORTHO05D006122 6.9e-161 572.0 779 58.3
Dinv15307 Davidia involucrata HOM05D004873 ORTHO05D006122 3.4e-160 569.7 780 57.9
Gorai.005G183000 Gossypium raimondii HOM05D004873 ORTHO05D006122 5.8e-160 568.9 779 59.9
Gohir.D02G163000 Gossypium hirsutum HOM05D004873 ORTHO05D006122 3.2e-158 563.1 779 59.1
Potri.010G094700 Populus trichocarpa HOM05D004873 ORTHO05D006122 5.4e-158 562.4 783 62.3
FAN12G3868 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.2e-157 561.2 779 57.8
CANSAT01G1467 Cannabis sativa HOM05D004873 ORTHO05D006122 7.9e-157 558.5 777 60.4
Gohir.A03G140300 Gossypium hirsutum HOM05D004873 ORTHO05D006122 2.4e-153 547.0 779 59.7
TAR374G0217 Trochodendron aralioides HOM05D004873 ORTHO05D006122 1.5e-152 544.3 773 57.6
Aqoxy3G02990_Aqoxy3G02991 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 5.8e-152 542.3 788 57.6
FAN17G2310 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.2e-150 536.6 778 56.4
Actinidia01706 Actinidia chinensis HOM05D004873 ORTHO05D006122 5.5e-150 535.8 779 52.6
PGSC0003DMG400030977 Solanum tuberosum HOM05D004873 ORTHO05D006122 6.0e-149 532.3 786 57.1
Hma1.2p1_0867F.1_g230230 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 1.8e-148 530.8 812 52.1
vmacro01183 Vaccinium macrocarpon HOM05D004873 ORTHO05D006122 1.8e-148 530.8 776 57.9
Rhsim12G0047400 Rhododendron simsii HOM05D004873 ORTHO05D006122 2.3e-148 530.4 834 55.8
DCAR_026543 Daucus carota HOM05D004873 ORTHO05D006122 1.1e-147 528.1 782 53.6
HPP92_019184 Vanilla planifolia HOM05D004873 ORTHO05D006122 1.1e-147 528.1 788 52.5
Sopen05g001620 Solanum pennellii HOM05D004873 ORTHO05D006122 3.3e-147 526.6 791 56.4
CAN.G376.10 Capsicum annuum HOM05D004873 ORTHO05D006122 9.6e-147 525.0 776 55.3
Lj6A805G39 Lonicera japonica HOM05D004873 ORTHO05D006122 4.0e-145 519.6 782 52.9
Oeu055452.2 Olea europaea HOM05D004873 ORTHO05D006122 1.2e-144 518.1 783 50.8
PSO063G1237 Papaver somniferum HOM05D004873 ORTHO05D006122 1.5e-144 517.7 782 58.8
Sc11g0001220 Simmondsia chinensis HOM05D004873 ORTHO05D006122 1.0e-143 515.0 767 57.1
PSO832G2005 Papaver somniferum HOM05D004873 ORTHO05D006122 1.9e-142 510.8 791 57.4
Peaxi162Scf00338g00218 Petunia axillaris HOM05D004873 ORTHO05D006122 2.5e-142 510.4 790 54.2
Cpa.g.sc69.19 Carica papaya HOM05D004873 ORTHO05D006122 7.9e-141 505.4 772 52.6
SGA_v2.0_scaffold165G38251 Striga asiatica HOM05D004873 ORTHO05D006122 7.9e-141 505.4 787 49.9
Cc11_g14610 Coffea canephora HOM05D004873 ORTHO05D006122 2.3e-140 503.8 790 53.9
DCAR_024143 Daucus carota HOM05D004873 ORTHO05D006122 2.3e-140 503.8 787 51.0
Thecc.02G248000 Theobroma cacao HOM05D004873 ORTHO05D006122 5.1e-140 502.7 698 59.3
Carub.0002s0504 Capsella rubella HOM05D004873 ORTHO05D006122 1.6e-138 497.7 781 55.3
MSTRG.7893 Avicennia marina HOM05D004873 ORTHO05D006122 2.8e-138 496.9 761 51.9
ECA199G0004 Erigeron canadensis HOM05D004873 ORTHO05D006122 6.9e-137 492.3 783 55.2
CARHR052750 Cardamine hirsuta HOM05D004873 ORTHO05D006122 9.0e-137 491.9 779 53.5
PGR102G2017 Punica granatum HOM05D004873 ORTHO05D006122 5.9e-136 489.2 804 54.2
AUR62005371 Chenopodium quinoa HOM05D004873 ORTHO05D006122 2.2e-135 487.3 794 49.2
AL2G16455 Arabidopsis lyrata HOM05D004873 ORTHO05D006122 8.4e-135 485.3 773 54.7
EL10Ac6g13668 Beta vulgaris HOM05D004873 ORTHO05D006122 1.1e-134 485.0 781 57.4
BcaC06g31808 Brassica carinata HOM05D004873 ORTHO05D006122 1.6e-133 481.1 773 55.8
Migut.L01408 Erythranthe guttata HOM05D004873 ORTHO05D006122 6.1e-133 479.2 787 52.6
Lsat_1_v5_gn_4_6981 Lactuca sativa HOM05D004873 ORTHO05D006122 6.7e-132 475.7 777 52.9
C01p36930 Brassica napus HOM05D004873 ORTHO05D006122 8.7e-132 475.3 777 52.1
BraA01t02979Z Brassica rapa HOM05D004873 ORTHO05D006122 1.1e-131 474.9 778 55.0
Nitab4.5_0000113g0270 Nicotiana tabacum HOM05D004873 ORTHO05D006122 1.9e-131 474.2 768 47.0
A01p29150 Brassica napus HOM05D004873 ORTHO05D006122 2.8e-130 470.3 780 54.5
BolC1t03651H Brassica oleracea HOM05D004873 ORTHO05D006122 3.1e-129 466.8 776 53.4
HanXRQChr12g0383471 Helianthus annuus HOM05D004873 ORTHO05D006122 3.1e-129 466.8 801 55.3
BcaC09g49418 Brassica carinata HOM05D004873 ORTHO05D006122 4.1e-129 466.5 772 53.8
THA.LOC104819547 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 4.1e-129 466.5 758 54.6
Sp2g04470 Schrenkiella parvula HOM05D004873 ORTHO05D006122 6.5e-127 459.1 773 55.2
AT1G60200 Arabidopsis thaliana HOM05D004873 ORTHO05D006122 2.5e-126 457.2 773 53.9
BcaC02g10690 Brassica carinata HOM05D004873 ORTHO05D006122 2.5e-126 457.2 771 51.9
C04p26690 Brassica napus HOM05D004873 ORTHO05D006122 2.5e-126 457.2 771 51.9
BolC4t24137H Brassica oleracea HOM05D004873 ORTHO05D006122 2.5e-126 457.2 771 51.9
Thhalv10023242m.g Eutrema salsugineum HOM05D004873 ORTHO05D006122 3.2e-126 456.8 784 54.5
Aa31LG2G10110 Aethionema arabicum HOM05D004873 ORTHO05D006122 6.1e-125 452.6 798 53.4
BcaB04g20256 Brassica carinata HOM05D004873 ORTHO05D006122 6.1e-125 452.6 771 54.1
HPP92_019185 Vanilla planifolia HOM05D004873 ORTHO05D006122 1.0e-124 451.8 788 48.9
THA.LOC104819514 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 1.4e-124 451.4 763 54.3
ATR0691G293 Amborella trichopoda HOM05D004873 ORTHO05D006122 1.8e-124 451.1 785 50.2
AUR62014033 Chenopodium quinoa HOM05D004873 ORTHO05D006122 1.1e-121 441.8 809 48.8
Hund05991 Selenicereus undatus HOM05D004873 ORTHO05D006122 9.4e-118 428.7 749 57.0
unitig_27.g25195 Utricularia gibba HOM05D004873 ORTHO05D006122 2.1e-117 427.6 761 47.6
Zm00001eb042420 Zea mays HOM05D004873 ORTHO05D006122 7.7e-112 409.1 780 47.7
TAR629G1177 Trochodendron aralioides HOM05D004873 ORTHO05D006122 2.7e-104 384.0 712 42.4
SEGI_30430 Sequoiadendron giganteum HOM05D004873 ORTHO05D006122 2.2e-103 380.9 786 46.8
Zm00001eb179020 Zea mays HOM05D004873 ORTHO05D006122 5.9e-96 356.3 720 48.6
Ah.03g132650 Amaranthus hybridus HOM05D004873 ORTHO05D006122 5.2e-92 343.2 790 46.6
C05p51270 Brassica napus HOM05D004873 ORTHO05D006122 2.4e-89 334.3 583 53.0
Nitab4.5_0010954g0010 Nicotiana tabacum HOM05D004873 ORTHO05D006122 5.0e-87 326.6 277 65.0
Oeu056734.1 Olea europaea HOM05D004873 ORTHO05D006122 6.6e-87 326.2 700 45.7
Pp3c25_3310 Physcomitrium patens HOM05D004873 ORTHO05D006122 3.3e-86 323.9 816 44.4
Mapoly0148s0032 Marchantia polymorpha HOM05D004873 ORTHO05D006122 8.0e-85 319.3 815 44.4
Solyc05g005620.4 Solanum lycopersicum HOM05D004873 ORTHO05D006122 1.1e-81 308.9 326 58.6
Pp3c16_19090 Physcomitrium patens HOM05D004873 ORTHO05D006122 1.3e-79 302.0 811 41.6
CDE01G0488 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 2.1e-61 241.5 223 67.3
Actinidia08168 Actinidia chinensis HOM05D004873 ORTHO05D006122 3.1e-60 237.7 553 45.4
FvH4_4g34570 Fragaria vesca HOM05D004873 ORTHO05D006122 1.3e-58 232.3 263 57.8
FAN12G0889 Fragaria x ananassa HOM05D004873 ORTHO05D006122 8.4e-58 229.6 263 57.0
SMO117G0118 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 4.6e-56 223.8 772 35.2
PSO675G2898 Papaver somniferum HOM05D004873 ORTHO05D006122 1.9e-46 191.8 247 48.6
CBR_g45271 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-44 185.7 272 49.6
Os08g0416400 Oryza sativa ssp. japonica HOM05D004873 ORTHO05D006122 1.7e-42 178.7 363 43.8
CDE02G2297 Ceratophyllum demersum HOM05D001801 ORTHO05D001739 2.9e-42 177.9 160 60.6
CDE01G0278 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 2.3e-39 168.3 273 43.6
CDE02G2726 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 1.3e-37 162.5 177 58.2
SHI27198 Sapria himalayana HOM05D004873 ORTHO05D006122 2.6e-35 154.8 126 73.8
Medtr5g034435 Medicago truncatula HOM05D004873 ORTHO05D006122 3.8e-26 124.4 73 86.3
Aqoxy1G03520 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 4.2e-25 120.9 71 85.9
MCO16G428 Micromonas commoda HOM05D004873 ORTHO05D006122 5.9e-19 100.5 96 45.8
Cre08.g375084 Chlamydomonas reinhardtii HOM05D004873 ORTHO05D006122 1.4e-17 95.9 131 45.0
SMO119G0006 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 3.7e-13 81.3 128 43.0
PRCOL_00005912 Prasinoderma coloniale HOM05D004873 ORTHO05D006122 4.8e-13 80.9 84 44.0
PSO017G6017 Papaver somniferum HOM05D004873 ORTHO05D006122 3.4e-11 74.7 144 34.7
PSO339G1217 Papaver somniferum HOM05D004873 ORTHO05D006122 7.7e-11 73.6 106 36.8
FAN22G0459 Fragaria x ananassa HOM05D004873 ORTHO05D006122 2.7e-08 65.1 81 50.6
Lsat_1_v5_gn_5_2020 Lactuca sativa HOM05D004873 ORTHO05D026408 7.9e-08 63.5 126 38.9
ECA247G0578 Erigeron canadensis HOM05D004873 ORTHO05D006122 5.1e-07 60.8 117 41.0
Lsat_1_v5_gn_6_33360 Lactuca sativa HOM05D004873 ORTHO05D026408 2.6e-06 58.5 170 34.1
Lalb_Chr06g0161861 Lupinus albus HOM05D004266 ORTHO05D005151 3.3e-06 58.2 74 36.5
CBR_g33965 Chara braunii HOM05D004266 ORTHO05D005151 5.7e-06 57.4 81 34.6
CDE07G0240 Ceratophyllum demersum HOM05D004266 ORTHO05D005151 7.4e-06 57.0 80 33.8
Ca_10640_v3 Cicer arietinum L. HOM05D004266 ORTHO05D005151 9.7e-06 56.6 73 35.6
Lalb_Chr02g0141671 Lupinus albus HOM05D004266 ORTHO05D005151 9.7e-06 56.6 73 35.6
PSO339G1828 Papaver somniferum HOM05D031134 ORTHO05D301998 9.7e-06 56.6 66 43.9
PSO339G4348 Papaver somniferum HOM05D031134 ORTHO05D302392 9.7e-06 56.6 66 43.9
PSO339G5906 Papaver somniferum HOM05D031134 ORTHO05D302295 9.7e-06 56.6 66 43.9


User provided reference genes

Program Settings